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The map label for this gene is lpsE [H]

Identifier: 23100341

GI number: 23100341

Start: 2973974

End: 2975203

Strand: Reverse

Name: lpsE [H]

Synonym: OB2886

Alternate gene names: 23100341

Gene position: 2975203-2973974 (Counterclockwise)

Preceding gene: 23100342

Following gene: 23100340

Centisome position: 81.95

GC content: 26.75

Gene sequence:

>1230_bases
ATGGAAAAAAATAAGAAGAATAGAATTACTATAATTACACCATTTTATCCAATAAAACATAGAGATGACTTGTTTGAGGA
TACAAAGGCAGTATATTACTTATTGAAAGAGTTTACTAATTCTAATGATATTCTTATAGTACATTCATTTATGCATGGAT
TTAAAGATGCATGGAGACAAATTCTAAAAGTGTTGCCAGTAAAATCGAACTATAAAAACTACCTATACAAAGATGATTAC
GGAAACCATATTCTTTTTTTAGAGTATCTGCTACTGCTACCTAAATCTATAAAAACTCTATCGTATTTTAATAAAAAATA
TGCCGAGATTTTATTTGAATATTTTGAAAATGAACAATTTAGTCCTGAAATAGGGGTAGTACATTTTCCTAGTTATTATA
AGGATTTAATGATAAATATGGATATACTTCCTAAGAAAATAGCTATAATTCATTCATTTGATATTAAGAATATTAAGAAT
AGATATTCTCTACCTTTTTGGAAAGAATACTTTGAAAAATATGATGCTATAGGTTTTAGATCATATATTATTAAAAAGGA
ATTTGAAAAACTAATAGGAACTAAGAATAAGTCATTTATGTGTTTATCAGGCATACCAGAGGAATATTTAAAAGTAAAAT
TATCTAATTCTACTTATAACACAAAAGAAGATATTAAACTGATGTACGCTGGTAGGTTAGATAGTAATAAAAATGTTGCT
AAATCTGTTTTGGCCTTAAAAGAAATTAATAAAAGTTTAGCATATTCTTTCACTATTGTAGGTGAGGGAGAAGAAAAGGA
AAATATTAAAAACTTATCTTTAGATTTAGGCATATCTGAAAGAATTAAATTTGTAGGTAGAGTAAGTAGAAATAAAACTT
TTAAAATAATGCAAGATCAAGATATTTTTATTATGGTTAGTATTAAAGAAACATTAGGGCTTGTGTATTTAGAAGCTATG
GCAGCAGGCTGTATTGTAATAGCTACAAGGGGACAAGGTATTGATGGGATAATATTAGATGGTGAGAATGGATTCTTGAC
GGAGTCTACTAATGAAAATGCCATTTATCAGACAATTTACAAAGTAATGAATTTGAGTCCTAATGAACAAATGAGAATTA
AACATAACGCTAAACAGACGGTTAGTCAATTAAGTGATATTTCTTTATCAAAAAAATATTACTCGAATATTCGCTCAATA
ATACAGGAAGAAAAGTACTATTATGAATAA

Upstream 100 bases:

>100_bases
ACTATTGTCGGAGCTGGATCAGTAGTCACTAAGAGTTTTCCAGATGGCCACTGTATAATTGCAGGTAACCCCGCAAAAAT
TTTAAGAAGGTTAGATTTAA

Downstream 100 bases:

>100_bases
AATTAAAAAGATTTTTAATGAAGGATTTTATAAGTCAATTATAACATTAATAACGGGTTCAATATTTGCACAAGCTTTAA
CTATATTAGTAGCTCCACTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MEKNKKNRITIITPFYPIKHRDDLFEDTKAVYYLLKEFTNSNDILIVHSFMHGFKDAWRQILKVLPVKSNYKNYLYKDDY
GNHILFLEYLLLLPKSIKTLSYFNKKYAEILFEYFENEQFSPEIGVVHFPSYYKDLMINMDILPKKIAIIHSFDIKNIKN
RYSLPFWKEYFEKYDAIGFRSYIIKKEFEKLIGTKNKSFMCLSGIPEEYLKVKLSNSTYNTKEDIKLMYAGRLDSNKNVA
KSVLALKEINKSLAYSFTIVGEGEEKENIKNLSLDLGISERIKFVGRVSRNKTFKIMQDQDIFIMVSIKETLGLVYLEAM
AAGCIVIATRGQGIDGIILDGENGFLTESTNENAIYQTIYKVMNLSPNEQMRIKHNAKQTVSQLSDISLSKKYYSNIRSI
IQEEKYYYE

Sequences:

>Translated_409_residues
MEKNKKNRITIITPFYPIKHRDDLFEDTKAVYYLLKEFTNSNDILIVHSFMHGFKDAWRQILKVLPVKSNYKNYLYKDDY
GNHILFLEYLLLLPKSIKTLSYFNKKYAEILFEYFENEQFSPEIGVVHFPSYYKDLMINMDILPKKIAIIHSFDIKNIKN
RYSLPFWKEYFEKYDAIGFRSYIIKKEFEKLIGTKNKSFMCLSGIPEEYLKVKLSNSTYNTKEDIKLMYAGRLDSNKNVA
KSVLALKEINKSLAYSFTIVGEGEEKENIKNLSLDLGISERIKFVGRVSRNKTFKIMQDQDIFIMVSIKETLGLVYLEAM
AAGCIVIATRGQGIDGIILDGENGFLTESTNENAIYQTIYKVMNLSPNEQMRIKHNAKQTVSQLSDISLSKKYYSNIRSI
IQEEKYYYE
>Mature_409_residues
MEKNKKNRITIITPFYPIKHRDDLFEDTKAVYYLLKEFTNSNDILIVHSFMHGFKDAWRQILKVLPVKSNYKNYLYKDDY
GNHILFLEYLLLLPKSIKTLSYFNKKYAEILFEYFENEQFSPEIGVVHFPSYYKDLMINMDILPKKIAIIHSFDIKNIKN
RYSLPFWKEYFEKYDAIGFRSYIIKKEFEKLIGTKNKSFMCLSGIPEEYLKVKLSNSTYNTKEDIKLMYAGRLDSNKNVA
KSVLALKEINKSLAYSFTIVGEGEEKENIKNLSLDLGISERIKFVGRVSRNKTFKIMQDQDIFIMVSIKETLGLVYLEAM
AAGCIVIATRGQGIDGIILDGENGFLTESTNENAIYQTIYKVMNLSPNEQMRIKHNAKQTVSQLSDISLSKKYYSNIRSI
IQEEKYYYE

Specific function: Involved In The Addition Of The First Glucose Residue To The Lipopolysaccharide Core. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 47906; Mature: 47906

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKNKKNRITIITPFYPIKHRDDLFEDTKAVYYLLKEFTNSNDILIVHSFMHGFKDAWRQ
CCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHH
ILKVLPVKSNYKNYLYKDDYGNHILFLEYLLLLPKSIKTLSYFNKKYAEILFEYFENEQF
HHHHCCCCCCCCCCCEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC
SPEIGVVHFPSYYKDLMINMDILPKKIAIIHSFDIKNIKNRYSLPFWKEYFEKYDAIGFR
CCCCCEEECCHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHCCCCHHHHHHHHHCCCHHH
SYIIKKEFEKLIGTKNKSFMCLSGIPEEYLKVKLSNSTYNTKEDIKLMYAGRLDSNKNVA
HHHHHHHHHHHHCCCCCCEEEECCCCHHHEEEEECCCCCCCHHCEEEEEECCCCCCHHHH
KSVLALKEINKSLAYSFTIVGEGEEKENIKNLSLDLGISERIKFVGRVSRNKTFKIMQDQ
HHHHHHHHHHHHHEEEEEEEECCCCCCCHHHEEEECCHHHHHHHHHHHCCCCEEEEEECC
DIFIMVSIKETLGLVYLEAMAAGCIVIATRGQGIDGIILDGENGFLTESTNENAIYQTIY
CEEEEEEEHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEECCCCEEECCCCCCHHHHHHH
KVMNLSPNEQMRIKHNAKQTVSQLSDISLSKKYYSNIRSIIQEEKYYYE
HHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEKNKKNRITIITPFYPIKHRDDLFEDTKAVYYLLKEFTNSNDILIVHSFMHGFKDAWRQ
CCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHH
ILKVLPVKSNYKNYLYKDDYGNHILFLEYLLLLPKSIKTLSYFNKKYAEILFEYFENEQF
HHHHCCCCCCCCCCCEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC
SPEIGVVHFPSYYKDLMINMDILPKKIAIIHSFDIKNIKNRYSLPFWKEYFEKYDAIGFR
CCCCCEEECCHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHCCCCHHHHHHHHHCCCHHH
SYIIKKEFEKLIGTKNKSFMCLSGIPEEYLKVKLSNSTYNTKEDIKLMYAGRLDSNKNVA
HHHHHHHHHHHHCCCCCCEEEECCCCHHHEEEEECCCCCCCHHCEEEEEECCCCCCHHHH
KSVLALKEINKSLAYSFTIVGEGEEKENIKNLSLDLGISERIKFVGRVSRNKTFKIMQDQ
HHHHHHHHHHHHHEEEEEEEECCCCCCCHHHEEEECCHHHHHHHHHHHCCCCEEEEEECC
DIFIMVSIKETLGLVYLEAMAAGCIVIATRGQGIDGIILDGENGFLTESTNENAIYQTIY
CEEEEEEEHHHHHHHHHHHHHCCEEEEEECCCCCCEEEEECCCCEEECCCCCCHHHHHHH
KVMNLSPNEQMRIKHNAKQTVSQLSDISLSKKYYSNIRSIIQEEKYYYE
HHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11157937; 11481430 [H]