| Definition | Oceanobacillus iheyensis HTE831, complete genome. |
|---|---|
| Accession | NC_004193 |
| Length | 3,630,528 |
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The map label for this gene is katA [H]
Identifier: 23100237
GI number: 23100237
Start: 2858942
End: 2860399
Strand: Reverse
Name: katA [H]
Synonym: OB2782
Alternate gene names: 23100237
Gene position: 2860399-2858942 (Counterclockwise)
Preceding gene: 23100238
Following gene: 23100234
Centisome position: 78.79
GC content: 37.52
Gene sequence:
>1458_bases ATGACTAAAGGAAATAACGATGAGCAGAATAATTCTCGTAATTATTCACAAGGGTTTGGGAGTCAAGGACTACATGGATA TCCAGGGAATGCGAGCGATAAATCCCATGCGAATCCCGCTGCTTTTAACTGGAATATTGATCTTCCAGCAGAAATTCATT CACAGACGGTTGGAAAACGTGGTCCAATTTTAAAACAGGACAATATCGAGCATGAAACATTACAGACATTTATTCATGAA AAGATTACCGAAAGACCAGTTCATGTAAAAGGTTGGGGGGCGTTTGGTTATTTTGAAACATTGTATTCTATGAGCGACTA TACAACTTTATCTTTTCTACAGATACCAGGTACACAAGTGCCAGTATTTGTGCGATTCTCCTTAGCAGTCAGTACGAAGG GAACGCCTGATACTTCAAGAAATGTACGAGGATTTGCGACTAAATTTTACAGTGAAGATGGTATATTTGATTTGATCTGC AATCATATTCCTGTTTTTTCTGTTCGCGACACCATTCGTTTTCCAGAAGCGATTAAAGCATTTTTACCATCTCCAGTAAA TAACTTAATCGATCCGACACGCTATTGGAACTTTGTAGCACGCGCACCTGAATCACTTCTCTTTACACTACTTGTTTATT CTAATCTTGGCACAGTGAAAAGTTTACGTCATTTGCCTGGGCATAGTGTAAATACCTATGTATGGAAAAATGCAGAAGGA AAACGGTATTTTATTAAATATACGTGGGCACCGATAGCCGGAGAGGAATATATTCGTAATGAAGAAGCGGTTAAATTAGC TGGTGAAAATCCAGATATTGCAGGGCAAGATTTACATGATGCAATTGAAAGAGGGGAGCCAGTCGAATATGGATTATATA TACAGATTATGGATCCAAAAGATGCTGCCAGTTTACCCTATGATCCATTAGATGATACGAAGTTATGGGATCAACAACAA TTTCCTTTTAAACCAGTAGGAGTTATGAAATTAAATAAAAATCCAGACAATTATATGGAACAGGTAGAGAAAGCAGCATT TTCGCCTACGAATTTATTAGAAGGTGTTGAGCTTTCGGATGATAAGATGCTGCAAGGAAGAGCTAATATATATTCTGATT CACAGCGTTATCGTATTGGTCCTGATTTTCGTAATGTTCCAGTAAATAATCAATCTAATTGGTGGCCAGGTGACTTAGTG ACAAGCGGTGATGGTCGATTTGTTGAAGGGGAGCTACAGCGGTCAGATATTGAAAAACAAGATGATTTTACACAACCCGG ACTTTTTTATGAATCATTGTCAGAAGAAGATAAGGAAGATTTAATAACTAATATGGCGGAAGGACTTTCGGTTGTTTCTA ATGATGTATTTAACACTGTCCATGGCTATATACAGGAAGCATCTAGAGATTTAGCGAACAGATTGAATAAAACTGTAATA CTGAAGCGAAAAAAATAG
Upstream 100 bases:
>100_bases TATAAATATTGCAGCAGTTGATCTCATACGGTTACGTCCAGGACATACGGTGGTAAACGGACGTTTGCGCTTTGATCTTG GTGTGATAGGAGGTTTGACC
Downstream 100 bases:
>100_bases ATTAAAATGAAAAACCGGTTGCTTCTCTAAAGGAAAAAGCATCCGGTATATTTTCTTTACGTATAAAATCCTTCATTGGA AGTAACGAAAGGTAGTACAT
Product: catalase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 485; Mature: 484
Protein sequence:
>485_residues MTKGNNDEQNNSRNYSQGFGSQGLHGYPGNASDKSHANPAAFNWNIDLPAEIHSQTVGKRGPILKQDNIEHETLQTFIHE KITERPVHVKGWGAFGYFETLYSMSDYTTLSFLQIPGTQVPVFVRFSLAVSTKGTPDTSRNVRGFATKFYSEDGIFDLIC NHIPVFSVRDTIRFPEAIKAFLPSPVNNLIDPTRYWNFVARAPESLLFTLLVYSNLGTVKSLRHLPGHSVNTYVWKNAEG KRYFIKYTWAPIAGEEYIRNEEAVKLAGENPDIAGQDLHDAIERGEPVEYGLYIQIMDPKDAASLPYDPLDDTKLWDQQQ FPFKPVGVMKLNKNPDNYMEQVEKAAFSPTNLLEGVELSDDKMLQGRANIYSDSQRYRIGPDFRNVPVNNQSNWWPGDLV TSGDGRFVEGELQRSDIEKQDDFTQPGLFYESLSEEDKEDLITNMAEGLSVVSNDVFNTVHGYIQEASRDLANRLNKTVI LKRKK
Sequences:
>Translated_485_residues MTKGNNDEQNNSRNYSQGFGSQGLHGYPGNASDKSHANPAAFNWNIDLPAEIHSQTVGKRGPILKQDNIEHETLQTFIHE KITERPVHVKGWGAFGYFETLYSMSDYTTLSFLQIPGTQVPVFVRFSLAVSTKGTPDTSRNVRGFATKFYSEDGIFDLIC NHIPVFSVRDTIRFPEAIKAFLPSPVNNLIDPTRYWNFVARAPESLLFTLLVYSNLGTVKSLRHLPGHSVNTYVWKNAEG KRYFIKYTWAPIAGEEYIRNEEAVKLAGENPDIAGQDLHDAIERGEPVEYGLYIQIMDPKDAASLPYDPLDDTKLWDQQQ FPFKPVGVMKLNKNPDNYMEQVEKAAFSPTNLLEGVELSDDKMLQGRANIYSDSQRYRIGPDFRNVPVNNQSNWWPGDLV TSGDGRFVEGELQRSDIEKQDDFTQPGLFYESLSEEDKEDLITNMAEGLSVVSNDVFNTVHGYIQEASRDLANRLNKTVI LKRKK >Mature_484_residues TKGNNDEQNNSRNYSQGFGSQGLHGYPGNASDKSHANPAAFNWNIDLPAEIHSQTVGKRGPILKQDNIEHETLQTFIHEK ITERPVHVKGWGAFGYFETLYSMSDYTTLSFLQIPGTQVPVFVRFSLAVSTKGTPDTSRNVRGFATKFYSEDGIFDLICN HIPVFSVRDTIRFPEAIKAFLPSPVNNLIDPTRYWNFVARAPESLLFTLLVYSNLGTVKSLRHLPGHSVNTYVWKNAEGK RYFIKYTWAPIAGEEYIRNEEAVKLAGENPDIAGQDLHDAIERGEPVEYGLYIQIMDPKDAASLPYDPLDDTKLWDQQQF PFKPVGVMKLNKNPDNYMEQVEKAAFSPTNLLEGVELSDDKMLQGRANIYSDSQRYRIGPDFRNVPVNNQSNWWPGDLVT SGDGRFVEGELQRSDIEKQDDFTQPGLFYESLSEEDKEDLITNMAEGLSVVSNDVFNTVHGYIQEASRDLANRLNKTVIL KRKK
Specific function: Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide [H]
COG id: COG0753
COG function: function code P; Catalase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the catalase family [H]
Homologues:
Organism=Homo sapiens, GI4557014, Length=425, Percent_Identity=36.4705882352941, Blast_Score=275, Evalue=8e-74, Organism=Escherichia coli, GI48994891, Length=352, Percent_Identity=39.2045454545455, Blast_Score=263, Evalue=3e-71, Organism=Caenorhabditis elegans, GI25147792, Length=458, Percent_Identity=32.9694323144105, Blast_Score=268, Evalue=6e-72, Organism=Caenorhabditis elegans, GI25151141, Length=458, Percent_Identity=32.9694323144105, Blast_Score=267, Evalue=7e-72, Organism=Caenorhabditis elegans, GI71998444, Length=460, Percent_Identity=32.8260869565217, Blast_Score=263, Evalue=2e-70, Organism=Saccharomyces cerevisiae, GI6320462, Length=339, Percent_Identity=39.2330383480826, Blast_Score=249, Evalue=6e-67, Organism=Saccharomyces cerevisiae, GI6321525, Length=373, Percent_Identity=34.3163538873995, Blast_Score=221, Evalue=2e-58, Organism=Drosophila melanogaster, GI17981717, Length=336, Percent_Identity=40.7738095238095, Blast_Score=269, Evalue=3e-72, Organism=Drosophila melanogaster, GI19920968, Length=335, Percent_Identity=39.7014925373134, Blast_Score=266, Evalue=2e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002226 - InterPro: IPR020835 - InterPro: IPR010582 - InterPro: IPR018028 - InterPro: IPR011614 [H]
Pfam domain/function: PF00199 Catalase; PF06628 Catalase-rel [H]
EC number: =1.11.1.6 [H]
Molecular weight: Translated: 54940; Mature: 54809
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKGNNDEQNNSRNYSQGFGSQGLHGYPGNASDKSHANPAAFNWNIDLPAEIHSQTVGKR CCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHCCCC GPILKQDNIEHETLQTFIHEKITERPVHVKGWGAFGYFETLYSMSDYTTLSFLQIPGTQV CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCCEEEEEECCCCCC PVFVRFSLAVSTKGTPDTSRNVRGFATKFYSEDGIFDLICNHIPVFSVRDTIRFPEAIKA EEEEEEEEEEECCCCCCCCCCCHHHHHHHHCCCCHHHHHHCCCCEEECHHHHCCHHHHHH FLPSPVNNLIDPTRYWNFVARAPESLLFTLLVYSNLGTVKSLRHLPGHSVNTYVWKNAEG HCCCCHHHHCCHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEEECCCC KRYFIKYTWAPIAGEEYIRNEEAVKLAGENPDIAGQDLHDAIERGEPVEYGLYIQIMDPK CEEEEEEEECCCCCHHHHCCCCCEEECCCCCCCCCCHHHHHHHCCCCEEEEEEEEEECCC DAASLPYDPLDDTKLWDQQQFPFKPVGVMKLNKNPDNYMEQVEKAAFSPTNLLEGVELSD CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHCCCCCCC DKMLQGRANIYSDSQRYRIGPDFRNVPVNNQSNWWPGDLVTSGDGRFVEGELQRSDIEKQ CHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCEEECHHHHHCCCHH DDFTQPGLFYESLSEEDKEDLITNMAEGLSVVSNDVFNTVHGYIQEASRDLANRLNKTVI CCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE LKRKK EEECC >Mature Secondary Structure TKGNNDEQNNSRNYSQGFGSQGLHGYPGNASDKSHANPAAFNWNIDLPAEIHSQTVGKR CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHCCCC GPILKQDNIEHETLQTFIHEKITERPVHVKGWGAFGYFETLYSMSDYTTLSFLQIPGTQV CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHCCCCCEEEEEECCCCCC PVFVRFSLAVSTKGTPDTSRNVRGFATKFYSEDGIFDLICNHIPVFSVRDTIRFPEAIKA EEEEEEEEEEECCCCCCCCCCCHHHHHHHHCCCCHHHHHHCCCCEEECHHHHCCHHHHHH FLPSPVNNLIDPTRYWNFVARAPESLLFTLLVYSNLGTVKSLRHLPGHSVNTYVWKNAEG HCCCCHHHHCCHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEEECCCC KRYFIKYTWAPIAGEEYIRNEEAVKLAGENPDIAGQDLHDAIERGEPVEYGLYIQIMDPK CEEEEEEEECCCCCHHHHCCCCCEEECCCCCCCCCCHHHHHHHCCCCEEEEEEEEEECCC DAASLPYDPLDDTKLWDQQQFPFKPVGVMKLNKNPDNYMEQVEKAAFSPTNLLEGVELSD CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHCCCCCCC DKMLQGRANIYSDSQRYRIGPDFRNVPVNNQSNWWPGDLVTSGDGRFVEGELQRSDIEKQ CHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEECCCCCEEECHHHHHCCCHH DDFTQPGLFYESLSEEDKEDLITNMAEGLSVVSNDVFNTVHGYIQEASRDLANRLNKTVI CCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE LKRKK EEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10567266 [H]