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The map label for this gene is yfkR [H]

Identifier: 23100221

GI number: 23100221

Start: 2838093

End: 2839199

Strand: Reverse

Name: yfkR [H]

Synonym: OB2766

Alternate gene names: 23100221

Gene position: 2839199-2838093 (Counterclockwise)

Preceding gene: 23100222

Following gene: 23100220

Centisome position: 78.2

GC content: 33.97

Gene sequence:

>1107_bases
ATGAAATCTAAGTATTGGTTGAAACTTCTATGCACATTGCTTACGTTAATAATACTATCAGGGTGTTGGGACTCCCGTGA
TATTAACTATCGTTCTATGCCGATTATGATGGGAGTGACGAAGGAAGAAGATTTATTTCATGTATATTTCATTATTCCTG
TATCCGTCGTTTCTGAACAAAGAAACTTGGCGAAGGTGGATGGTAAGGGAGCAACGGTATTAGACGCTACCGAACAAATA
CGGAAAAAAATCGAAACGACCATTGATTTGGAACATATTGATTTTGTCGTAATAGATGAGAAATTAGGTGAAGAAGGAAT
CGAGAAAATTATTAATACGTTTATTAGAATGCGTGATATGCCAGCTTCACCAGCTGTTGCATTTATAGATGAGGATATGA
ACAAATATATGGAGATGATGATTAGTAATTTTGAAGAAGTAGGTACGCCAATTTTTGGATTTCTTGAAAAGCAAGTAGGG
TGGGATATTTATGATCCAGAAGTAAGCTTATGGGAACTGTATCGGGGAATAAATTCATACACTACCGACATTGCAGTCCC
GTTAATTGGATCTAATAAAGATTTAACCATGGATTATCTAGGTGCATCGGTATTAAAAAATGGAAAAATTGTTGACACAA
TAAGTTCCGTTGAAGTTATGATTATGAATTTGCTGGATAATGAAGAAGTAATAAAAACCTTTGTTACTATAGATGATACA
ACGAATGTCGAGTTGGTAGACAGGGATGTGAATTACGATTATAACAAGCGTGGAGAAGAGATTGATTTAACGATAAAATT
AGAATTTGTATTAATTGTTGCTGAAGCAGAGGATGATTTAGCGGATAAAGATATTAAACAAATGTTTGAGGAAAAAATCG
AACGTGAGACCTTGCAGCTTGTGCAAAAATTGCAAGAGCAACAAGTTGATATATTAGGAATAAGCAATCGTCTGCGTACA
AGATACACCAATGCAGAACTAAAAAACTTTGTAAATGAAGTTTATCCAAACATTAATGTGAATGTAGAAGTAGAAGCTGT
AATAGAAAATAACGGTAAATTGAGAAATTTAAATAACGATAATTTTAAAGATTGGGAGGAGGAATAG

Upstream 100 bases:

>100_bases
GAACAAGTACAGAGTCATGTGTTATGGCTTACCCCGCTTCGATTTTATACGATAATTAGTCTTTTGGTTTTCATCTTTTG
GATAGGAAGAAGGCAAAAGC

Downstream 100 bases:

>100_bases
TCCAAGCGCTATTCCTTCTTCAATTAAATTAGTTGCAAATTCCAGTGCTGAAAATCAAACAAGGAAACATCCAGATTTGT
TATAATAATAAGTATACAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MKSKYWLKLLCTLLTLIILSGCWDSRDINYRSMPIMMGVTKEEDLFHVYFIIPVSVVSEQRNLAKVDGKGATVLDATEQI
RKKIETTIDLEHIDFVVIDEKLGEEGIEKIINTFIRMRDMPASPAVAFIDEDMNKYMEMMISNFEEVGTPIFGFLEKQVG
WDIYDPEVSLWELYRGINSYTTDIAVPLIGSNKDLTMDYLGASVLKNGKIVDTISSVEVMIMNLLDNEEVIKTFVTIDDT
TNVELVDRDVNYDYNKRGEEIDLTIKLEFVLIVAEAEDDLADKDIKQMFEEKIERETLQLVQKLQEQQVDILGISNRLRT
RYTNAELKNFVNEVYPNINVNVEVEAVIENNGKLRNLNNDNFKDWEEE

Sequences:

>Translated_368_residues
MKSKYWLKLLCTLLTLIILSGCWDSRDINYRSMPIMMGVTKEEDLFHVYFIIPVSVVSEQRNLAKVDGKGATVLDATEQI
RKKIETTIDLEHIDFVVIDEKLGEEGIEKIINTFIRMRDMPASPAVAFIDEDMNKYMEMMISNFEEVGTPIFGFLEKQVG
WDIYDPEVSLWELYRGINSYTTDIAVPLIGSNKDLTMDYLGASVLKNGKIVDTISSVEVMIMNLLDNEEVIKTFVTIDDT
TNVELVDRDVNYDYNKRGEEIDLTIKLEFVLIVAEAEDDLADKDIKQMFEEKIERETLQLVQKLQEQQVDILGISNRLRT
RYTNAELKNFVNEVYPNINVNVEVEAVIENNGKLRNLNNDNFKDWEEE
>Mature_368_residues
MKSKYWLKLLCTLLTLIILSGCWDSRDINYRSMPIMMGVTKEEDLFHVYFIIPVSVVSEQRNLAKVDGKGATVLDATEQI
RKKIETTIDLEHIDFVVIDEKLGEEGIEKIINTFIRMRDMPASPAVAFIDEDMNKYMEMMISNFEEVGTPIFGFLEKQVG
WDIYDPEVSLWELYRGINSYTTDIAVPLIGSNKDLTMDYLGASVLKNGKIVDTISSVEVMIMNLLDNEEVIKTFVTIDDT
TNVELVDRDVNYDYNKRGEEIDLTIKLEFVLIVAEAEDDLADKDIKQMFEEKIERETLQLVQKLQEQQVDILGISNRLRT
RYTNAELKNFVNEVYPNINVNVEVEAVIENNGKLRNLNNDNFKDWEEE

Specific function: May be involved in spore germination [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKC lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008844 [H]

Pfam domain/function: PF05504 Spore_GerAC [H]

EC number: NA

Molecular weight: Translated: 42488; Mature: 42488

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSKYWLKLLCTLLTLIILSGCWDSRDINYRSMPIMMGVTKEEDLFHVYFIIPVSVVSEQ
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEEHHHHHCC
RNLAKVDGKGATVLDATEQIRKKIETTIDLEHIDFVVIDEKLGEEGIEKIINTFIRMRDM
CCCEEECCCCCEEEHHHHHHHHHHHHHEEHHHCEEEEEEHHCCHHHHHHHHHHHHHHCCC
PASPAVAFIDEDMNKYMEMMISNFEEVGTPIFGFLEKQVGWDIYDPEVSLWELYRGINSY
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEECCCHHHHHHHCCCCCC
TTDIAVPLIGSNKDLTMDYLGASVLKNGKIVDTISSVEVMIMNLLDNEEVIKTFVTIDDT
CCEEEEEEECCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCHHHEEEEEEECCC
TNVELVDRDVNYDYNKRGEEIDLTIKLEFVLIVAEAEDDLADKDIKQMFEEKIERETLQL
CCEEEEECCCCCCCCCCCCEEEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
VQKLQEQQVDILGISNRLRTRYTNAELKNFVNEVYPNINVNVEVEAVIENNGKLRNLNND
HHHHHHCCEEEEECCHHHHHHCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEECCCCC
NFKDWEEE
CCCCCCCC
>Mature Secondary Structure
MKSKYWLKLLCTLLTLIILSGCWDSRDINYRSMPIMMGVTKEEDLFHVYFIIPVSVVSEQ
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEEEHHHHHCC
RNLAKVDGKGATVLDATEQIRKKIETTIDLEHIDFVVIDEKLGEEGIEKIINTFIRMRDM
CCCEEECCCCCEEEHHHHHHHHHHHHHEEHHHCEEEEEEHHCCHHHHHHHHHHHHHHCCC
PASPAVAFIDEDMNKYMEMMISNFEEVGTPIFGFLEKQVGWDIYDPEVSLWELYRGINSY
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEECCCHHHHHHHCCCCCC
TTDIAVPLIGSNKDLTMDYLGASVLKNGKIVDTISSVEVMIMNLLDNEEVIKTFVTIDDT
CCEEEEEEECCCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCHHHEEEEEEECCC
TNVELVDRDVNYDYNKRGEEIDLTIKLEFVLIVAEAEDDLADKDIKQMFEEKIERETLQL
CCEEEEECCCCCCCCCCCCEEEEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
VQKLQEQQVDILGISNRLRTRYTNAELKNFVNEVYPNINVNVEVEAVIENNGKLRNLNND
HHHHHHCCEEEEECCHHHHHHCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEECCCCC
NFKDWEEE
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]