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The map label for this gene is trg [C]

Identifier: 23100184

GI number: 23100184

Start: 2797894

End: 2799516

Strand: Reverse

Name: trg [C]

Synonym: OB2729

Alternate gene names: 23100184

Gene position: 2799516-2797894 (Counterclockwise)

Preceding gene: 23100185

Following gene: 23100182

Centisome position: 77.11

GC content: 39.13

Gene sequence:

>1623_bases
TTGCAAGAGCCTTCCTTGGTTCAAGACTCAAGCTATGATCCAACAGAACGTCCATGGTACGTGGCTTCGATGGAAAACCA
AGATAATGTGATTATTTCTGATCCATATCATGCAGCAAGCACTGGGGAACTTGTGGTTACAGTATCTAAAGCAATGGAAG
ATGGATCAGGGGTCGTAGCATTAGATTTATCGATTGACTATATTCAAGAAATCGCATCTGGAGTAAATATTGGTGAAGAT
GGCTATGTTATTTTATTAGATCAAGCGCAAAATATTATTTATCATCCAGAGCAAGAAGCTGGTACGAAGGGTGAAGAAGA
AATTTATAGCAAAATATATGAGAACAAAAATGGTGAGTTAACCTATACGTACCATAGTGATGATAAGCTCTTACACTTTG
ATACAAATGAGCTGACAGGTTGGAAGGTTGTCGGAACGATGGATCGAGGAGAAATCAAAGACATGATGTTGCCTGTTTTT
TGGACAACATTAGGCCTCGTCATAGGTTCCACCATTTTAGGAGGCATTATGATACTCCTTATTATTCGATCTGTATTGAA
ACCGATTCATGCGTTGAAAGAAACAGCACTTATCATTAGCACTGGTGATTTAACTCAGACTATTGATGTGAGAACAAACG
ATGAAATTGGTCAGTTAGGAATGGCCTTTAATCAAATGCAAGACGGTCTAAAGGAACTAATTCGTGATGTAGAATTTAAT
GCACAACAAGTAGCCGCTTCTGCAGAACAATTAAATGCCAATGCAGATCAAATGACAAGCTCAACGGAGCAAGTGTCAAC
AGCAATTCAAGAAGTTTCTTCTAGTGCTGAAAGTCAACTGAATGGTACCGAAGAAAGTGCTAATTCTTTAGAAGAAGTAT
CAGCAGGAGTCGAAAAAATTGTTGATAGTGCAACAGCGGTATCAGGTTATGTGGAAGAAATGAATAGTCAAGCAGAGGTT
GGTGGACAAGCGGTACACAATACTTTAGAACAGATGAATGCAATTCAGGAGTCTGTGTCCAACTCGAATCAAATGATTGG
GTCTTTATTAGAACGTTCGAAAGAAGTAACTACAATACTAAGCGCAATTACGGATATCTCCGAACAAACTAACCTACTAG
CGTTAAATGCTGCAATTGAAGCAGTGAGAGCTGGAGAACATGGAAGGGGATTCGCAGTTGTTGCTGATGAAGTCCGTAAA
CTAGCGGAGCAATCACAGAACTCGGCAAATGATATTAACGTTATTCTAGAAGGAATTCAACATGATATCCAAACAACAGT
GGATGGAATGTCAACCGTAACAGATAAGGTTACTTCAGGTGTAGAAGTGTCCTATGATGCAATAGATAAATTTGGTCAAA
TTATGCAGACGAGTATTAAAATCCGACCACAAGTAGAAGAAGTAACTGCCATCTCTGAAGAAATGGCTGCAGCAGTACAA
CAAGTCACTGCAACAGCGATCGATTTAGCAAACATTGCAAGAAGTAATGCCGCATCCTCTGAAGAAGTAGCAGCTTCAAC
AGAAGAACAACTAGCATCCATGGAGGAAATCTCTGCTTCAGCCAAATCTTTAACAGATATGGCAGAAGAGTTAACCGAAA
AAATCGCAAAATATAATTATTAA

Upstream 100 bases:

>100_bases
TGAAGATGACGGCGAACAAGTCTTTCAACGTTTTATGCAGTATATAGAATTACGACCAGAAGTATTAAGTGTATTTATTG
GTACAGAGACAGGAGATTTC

Downstream 100 bases:

>100_bases
CTATGTAGCATAAAAAAAGACAGGAGCTTATGAAGATGGCTGCACGGATAGATGATTACTACTATTCGTATAGCCAAGCA
AAGCTCCTGTCTTTTTGATT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 540; Mature: 540

Protein sequence:

>540_residues
MQEPSLVQDSSYDPTERPWYVASMENQDNVIISDPYHAASTGELVVTVSKAMEDGSGVVALDLSIDYIQEIASGVNIGED
GYVILLDQAQNIIYHPEQEAGTKGEEEIYSKIYENKNGELTYTYHSDDKLLHFDTNELTGWKVVGTMDRGEIKDMMLPVF
WTTLGLVIGSTILGGIMILLIIRSVLKPIHALKETALIISTGDLTQTIDVRTNDEIGQLGMAFNQMQDGLKELIRDVEFN
AQQVAASAEQLNANADQMTSSTEQVSTAIQEVSSSAESQLNGTEESANSLEEVSAGVEKIVDSATAVSGYVEEMNSQAEV
GGQAVHNTLEQMNAIQESVSNSNQMIGSLLERSKEVTTILSAITDISEQTNLLALNAAIEAVRAGEHGRGFAVVADEVRK
LAEQSQNSANDINVILEGIQHDIQTTVDGMSTVTDKVTSGVEVSYDAIDKFGQIMQTSIKIRPQVEEVTAISEEMAAAVQ
QVTATAIDLANIARSNAASSEEVAASTEEQLASMEEISASAKSLTDMAEELTEKIAKYNY

Sequences:

>Translated_540_residues
MQEPSLVQDSSYDPTERPWYVASMENQDNVIISDPYHAASTGELVVTVSKAMEDGSGVVALDLSIDYIQEIASGVNIGED
GYVILLDQAQNIIYHPEQEAGTKGEEEIYSKIYENKNGELTYTYHSDDKLLHFDTNELTGWKVVGTMDRGEIKDMMLPVF
WTTLGLVIGSTILGGIMILLIIRSVLKPIHALKETALIISTGDLTQTIDVRTNDEIGQLGMAFNQMQDGLKELIRDVEFN
AQQVAASAEQLNANADQMTSSTEQVSTAIQEVSSSAESQLNGTEESANSLEEVSAGVEKIVDSATAVSGYVEEMNSQAEV
GGQAVHNTLEQMNAIQESVSNSNQMIGSLLERSKEVTTILSAITDISEQTNLLALNAAIEAVRAGEHGRGFAVVADEVRK
LAEQSQNSANDINVILEGIQHDIQTTVDGMSTVTDKVTSGVEVSYDAIDKFGQIMQTSIKIRPQVEEVTAISEEMAAAVQ
QVTATAIDLANIARSNAASSEEVAASTEEQLASMEEISASAKSLTDMAEELTEKIAKYNY
>Mature_540_residues
MQEPSLVQDSSYDPTERPWYVASMENQDNVIISDPYHAASTGELVVTVSKAMEDGSGVVALDLSIDYIQEIASGVNIGED
GYVILLDQAQNIIYHPEQEAGTKGEEEIYSKIYENKNGELTYTYHSDDKLLHFDTNELTGWKVVGTMDRGEIKDMMLPVF
WTTLGLVIGSTILGGIMILLIIRSVLKPIHALKETALIISTGDLTQTIDVRTNDEIGQLGMAFNQMQDGLKELIRDVEFN
AQQVAASAEQLNANADQMTSSTEQVSTAIQEVSSSAESQLNGTEESANSLEEVSAGVEKIVDSATAVSGYVEEMNSQAEV
GGQAVHNTLEQMNAIQESVSNSNQMIGSLLERSKEVTTILSAITDISEQTNLLALNAAIEAVRAGEHGRGFAVVADEVRK
LAEQSQNSANDINVILEGIQHDIQTTVDGMSTVTDKVTSGVEVSYDAIDKFGQIMQTSIKIRPQVEEVTAISEEMAAAVQ
QVTATAIDLANIARSNAASSEEVAASTEEQLASMEEISASAKSLTDMAEELTEKIAKYNY

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=367, Percent_Identity=32.1525885558583, Blast_Score=132, Evalue=4e-32,
Organism=Escherichia coli, GI2367378, Length=256, Percent_Identity=32.8125, Blast_Score=118, Evalue=9e-28,
Organism=Escherichia coli, GI1788195, Length=318, Percent_Identity=28.6163522012579, Blast_Score=114, Evalue=2e-26,
Organism=Escherichia coli, GI1789453, Length=289, Percent_Identity=29.0657439446367, Blast_Score=108, Evalue=8e-25,
Organism=Escherichia coli, GI1788194, Length=340, Percent_Identity=27.0588235294118, Blast_Score=103, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 58341; Mature: 58341

Theoretical pI: Translated: 3.92; Mature: 3.92

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEPSLVQDSSYDPTERPWYVASMENQDNVIISDPYHAASTGELVVTVSKAMEDGSGVVA
CCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCCCCCCCEEEEEHHHHCCCCCEEE
LDLSIDYIQEIASGVNIGEDGYVILLDQAQNIIYHPEQEAGTKGEEEIYSKIYENKNGEL
EECCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHCCCCCHHHHHHHHHHCCCCCE
TYTYHSDDKLLHFDTNELTGWKVVGTMDRGEIKDMMLPVFWTTLGLVIGSTILGGIMILL
EEEEECCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIRSVLKPIHALKETALIISTGDLTQTIDVRTNDEIGQLGMAFNQMQDGLKELIRDVEFN
HHHHHHHHHHHHHHCEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
AQQVAASAEQLNANADQMTSSTEQVSTAIQEVSSSAESQLNGTEESANSLEEVSAGVEKI
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
VDSATAVSGYVEEMNSQAEVGGQAVHNTLEQMNAIQESVSNSNQMIGSLLERSKEVTTIL
HHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
SAITDISEQTNLLALNAAIEAVRAGEHGRGFAVVADEVRKLAEQSQNSANDINVILEGIQ
HHHHHHHHCCCEEEHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHHH
HDIQTTVDGMSTVTDKVTSGVEVSYDAIDKFGQIMQTSIKIRPQVEEVTAISEEMAAAVQ
HHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
QVTATAIDLANIARSNAASSEEVAASTEEQLASMEEISASAKSLTDMAEELTEKIAKYNY
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQEPSLVQDSSYDPTERPWYVASMENQDNVIISDPYHAASTGELVVTVSKAMEDGSGVVA
CCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCCCCCCCEEEEEHHHHCCCCCEEE
LDLSIDYIQEIASGVNIGEDGYVILLDQAQNIIYHPEQEAGTKGEEEIYSKIYENKNGEL
EECCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHCCCCCHHHHHHHHHHCCCCCE
TYTYHSDDKLLHFDTNELTGWKVVGTMDRGEIKDMMLPVFWTTLGLVIGSTILGGIMILL
EEEEECCCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIRSVLKPIHALKETALIISTGDLTQTIDVRTNDEIGQLGMAFNQMQDGLKELIRDVEFN
HHHHHHHHHHHHHHCEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
AQQVAASAEQLNANADQMTSSTEQVSTAIQEVSSSAESQLNGTEESANSLEEVSAGVEKI
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
VDSATAVSGYVEEMNSQAEVGGQAVHNTLEQMNAIQESVSNSNQMIGSLLERSKEVTTIL
HHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
SAITDISEQTNLLALNAAIEAVRAGEHGRGFAVVADEVRKLAEQSQNSANDINVILEGIQ
HHHHHHHHCCCEEEHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHHH
HDIQTTVDGMSTVTDKVTSGVEVSYDAIDKFGQIMQTSIKIRPQVEEVTAISEEMAAAVQ
HHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
QVTATAIDLANIARSNAASSEEVAASTEEQLASMEEISASAKSLTDMAEELTEKIAKYNY
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA