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The map label for this gene is araL [H]

Identifier: 23100176

GI number: 23100176

Start: 2790480

End: 2791298

Strand: Reverse

Name: araL [H]

Synonym: OB2721

Alternate gene names: 23100176

Gene position: 2791298-2790480 (Counterclockwise)

Preceding gene: 23100177

Following gene: 23100173

Centisome position: 76.88

GC content: 37.24

Gene sequence:

>819_bases
TTGCAGAGAGGATTCATATTTGATTTAGATGGTACGATCTATATTGAAAATCAATTAATTCCTGGAGTTTTTGAAACTGT
ACAACAACTCATTCAACGTGGAGATAAGGTTATCTACTTTACAAATAAATCAATCGAAAGTATTGCCACTTATGTACAAA
AACTAAGGGCTTTAGGTATCGAAGTGAAAAATAACCAAGTCGTGAACTCTAATTATCTAGTTGCTCGATATTTAGAAAAA
AATATCTCACTCCAAGCAAAGGTGATGGTCATAGGTGAAAATCCTTTAATTGAAGAAATAGAAAAGAAAGGTATTAAGTG
TACGTGGGATCCTTTAGAAACGTCCTATGTAATTATCGGTTGGGATCGAGAGTTCACATATGAAAAGCTCAATCTTGTGT
TTCAAGCTTGGAAAAAAGGAGCAACAATCATCGCGACGAATCCGGACCGAACATGTCCAGTGGAAAATGGCGAAATTCCA
GATTGTGGAGCGATGATTGGAGCTTTAGAAGGGGCAACTGGGGAAAAAATTGAGTTGATACTAGGAAAACCGTCTGTCCA
AGCAGCACAATTTATTACACAGGAATTGATGCAACTTCCGCCTGAGCAATGCTACATGGTTGGTGATCGCATAGAAACCG
ATATAAAAATGGGCATTGAGAGTGGGATGCATACCGTATTAGTACTTACAGGCATCACAACGAAAAAAATGATAAACCAA
TCACAATACCATCCTGAATTTGTCGTTGATAGTGTTCGAGATATAATAGACACAATTATAAATCTAAATTCCAAAGGGAA
GGATCCCCGGAAGAAATAG

Upstream 100 bases:

>100_bases
GTCGATTATTTTAGTATTAATGGTTGTTACACTGCAAATGATTGCCAACAAAATTTCATCTTCAGGTAAATAGAGAGTTT
CATCAAGGGGAGGAAGATCG

Downstream 100 bases:

>100_bases
CAAGTGCCCCGGCTTTTAGTCCATTCATGATTTCTTGTTTATCACTAATCAATCCACCTGCAATTACTGGCAGGTGGGTT
TGTTTTGTAATTTGATCAAT

Product: L-arabinose operon protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MQRGFIFDLDGTIYIENQLIPGVFETVQQLIQRGDKVIYFTNKSIESIATYVQKLRALGIEVKNNQVVNSNYLVARYLEK
NISLQAKVMVIGENPLIEEIEKKGIKCTWDPLETSYVIIGWDREFTYEKLNLVFQAWKKGATIIATNPDRTCPVENGEIP
DCGAMIGALEGATGEKIELILGKPSVQAAQFITQELMQLPPEQCYMVGDRIETDIKMGIESGMHTVLVLTGITTKKMINQ
SQYHPEFVVDSVRDIIDTIINLNSKGKDPRKK

Sequences:

>Translated_272_residues
MQRGFIFDLDGTIYIENQLIPGVFETVQQLIQRGDKVIYFTNKSIESIATYVQKLRALGIEVKNNQVVNSNYLVARYLEK
NISLQAKVMVIGENPLIEEIEKKGIKCTWDPLETSYVIIGWDREFTYEKLNLVFQAWKKGATIIATNPDRTCPVENGEIP
DCGAMIGALEGATGEKIELILGKPSVQAAQFITQELMQLPPEQCYMVGDRIETDIKMGIESGMHTVLVLTGITTKKMINQ
SQYHPEFVVDSVRDIIDTIINLNSKGKDPRKK
>Mature_272_residues
MQRGFIFDLDGTIYIENQLIPGVFETVQQLIQRGDKVIYFTNKSIESIATYVQKLRALGIEVKNNQVVNSNYLVARYLEK
NISLQAKVMVIGENPLIEEIEKKGIKCTWDPLETSYVIIGWDREFTYEKLNLVFQAWKKGATIIATNPDRTCPVENGEIP
DCGAMIGALEGATGEKIELILGKPSVQAAQFITQELMQLPPEQCYMVGDRIETDIKMGIESGMHTVLVLTGITTKKMINQ
SQYHPEFVVDSVRDIIDTIINLNSKGKDPRKK

Specific function: Unknown

COG id: COG0647

COG function: function code G; Predicted sugar phosphatases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI108796653, Length=291, Percent_Identity=29.8969072164948, Blast_Score=124, Evalue=8e-29,
Organism=Homo sapiens, GI10092677, Length=276, Percent_Identity=27.1739130434783, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI14149777, Length=267, Percent_Identity=28.4644194756554, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI269847098, Length=272, Percent_Identity=26.8382352941176, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI1786890, Length=253, Percent_Identity=28.8537549407115, Blast_Score=113, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17562458, Length=285, Percent_Identity=29.4736842105263, Blast_Score=120, Evalue=9e-28,
Organism=Caenorhabditis elegans, GI17560956, Length=285, Percent_Identity=29.4736842105263, Blast_Score=119, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI17558880, Length=285, Percent_Identity=29.4736842105263, Blast_Score=119, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI193210059, Length=257, Percent_Identity=26.8482490272374, Blast_Score=85, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI71984613, Length=267, Percent_Identity=24.7191011235955, Blast_Score=81, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI86563050, Length=245, Percent_Identity=26.530612244898, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17562356, Length=258, Percent_Identity=29.4573643410853, Blast_Score=67, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6319965, Length=238, Percent_Identity=29.4117647058824, Blast_Score=102, Evalue=9e-23,
Organism=Drosophila melanogaster, GI24666141, Length=285, Percent_Identity=24.5614035087719, Blast_Score=101, Evalue=7e-22,
Organism=Drosophila melanogaster, GI24656326, Length=265, Percent_Identity=29.4339622641509, Blast_Score=88, Evalue=5e-18,
Organism=Drosophila melanogaster, GI24641437, Length=267, Percent_Identity=25.0936329588015, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24656330, Length=255, Percent_Identity=24.7058823529412, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI18859765, Length=290, Percent_Identity=23.448275862069, Blast_Score=72, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006357
- InterPro:   IPR023215 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 30661; Mature: 30661

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRGFIFDLDGTIYIENQLIPGVFETVQQLIQRGDKVIYFTNKSIESIATYVQKLRALGI
CCCCEEEECCCEEEECCCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCC
EVKNNQVVNSNYLVARYLEKNISLQAKVMVIGENPLIEEIEKKGIKCTWDPLETSYVIIG
EECCCEEECCCHHEEEHHHHCCCEEEEEEEECCCCHHHHHHHCCCEEEECCCCCCEEEEE
WDREFTYEKLNLVFQAWKKGATIIATNPDRTCPVENGEIPDCGAMIGALEGATGEKIELI
CCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEE
LGKPSVQAAQFITQELMQLPPEQCYMVGDRIETDIKMGIESGMHTVLVLTGITTKKMINQ
ECCCCHHHHHHHHHHHHHCCHHHHEEECCHHHHHHHHHHHCCCEEEEEEECCHHHHHHCC
SQYHPEFVVDSVRDIIDTIINLNSKGKDPRKK
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MQRGFIFDLDGTIYIENQLIPGVFETVQQLIQRGDKVIYFTNKSIESIATYVQKLRALGI
CCCCEEEECCCEEEECCCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCC
EVKNNQVVNSNYLVARYLEKNISLQAKVMVIGENPLIEEIEKKGIKCTWDPLETSYVIIG
EECCCEEECCCHHEEEHHHHCCCEEEEEEEECCCCHHHHHHHCCCEEEECCCCCCEEEEE
WDREFTYEKLNLVFQAWKKGATIIATNPDRTCPVENGEIPDCGAMIGALEGATGEKIELI
CCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEE
LGKPSVQAAQFITQELMQLPPEQCYMVGDRIETDIKMGIESGMHTVLVLTGITTKKMINQ
ECCCCHHHHHHHHHHHHHCCHHHHEEECCHHHHHHHHHHHCCCEEEEEEECCHHHHHHCC
SQYHPEFVVDSVRDIIDTIINLNSKGKDPRKK
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9084180; 8969504; 9384377; 10417639 [H]