| Definition | Oceanobacillus iheyensis HTE831, complete genome. |
|---|---|
| Accession | NC_004193 |
| Length | 3,630,528 |
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The map label for this gene is kdgA [H]
Identifier: 23100158
GI number: 23100158
Start: 2773342
End: 2773974
Strand: Reverse
Name: kdgA [H]
Synonym: OB2703
Alternate gene names: 23100158
Gene position: 2773974-2773342 (Counterclockwise)
Preceding gene: 23100159
Following gene: 23100157
Centisome position: 76.41
GC content: 36.49
Gene sequence:
>633_bases ATGTCAGTAATAGAAGGTATTCAAGAAGAAAAAGTAGTAGCAGTTATCCGAAAAGCAAATTCGGATAATATTGTACCTAT TTTGGAAGCGTTAGCAAAAGGTGGGATTCATCATGTTGAAATAACAGCTGAAACCCCAAATGTAGAAAATGTAATTAAAA CAGCAGTTCAAAACGTAAATGAAAAAATTCAAGTTGGTGCTGGTACAGTACTAGATCCAGAGACTGCGAGAACATTAATT TTAGCTGGAGCAACGTTTATCGTATCTCCAACATTAAATATAAAAACAGTAGAAATGTGTCAACGGTATGGTGTAGAACA TATTCCTGGTGTATTTACACCGACTGAAGTATTAACTGCCTATGAGCATGGTGCGAGAATGGTGAAAATTTTTCCTATCG ATGCAGTCGGTCCAAACTATGTGAAAAATATTCGTGGGCCATTACCACATGTGAAAGCGATGGTAACTGGTGGAATTACC TTGGATAATATCGGTGATTATTTGAAAGCAGGAAGTTTTGCTGTTGGAACAGGAAGTAGCTTAGTAAATGCTCCGTTACT GCAAACAAAAGAAGATTATGATGAACTAACAGAACGTGCGAAACAATATATTCAAAGCGCAAAAGAAGTTTAG
Upstream 100 bases:
>100_bases GATGCCATCGTGGTGTATTTATTAGATACGTATCCAGCTAACCGTACTGTGGAAAGTCTAAACCAAAAACATACTAATTT AGAATAAGGTGGGATTATTT
Downstream 100 bases:
>100_bases AAAAACAATTGCTAAAACACCAAGAGGGAGGAACATTTTATGAGAAAAAATAAAATCGCTTTCATAATGTTGGTTATCAG TTTAATAGCTTTTGTACTTT
Product: 2-keto-3-deoxy-6-phospho-gluconate aldolase
Products: NA
Alternate protein names: 4-hydroxy-2-oxoglutarate aldolase; 2-keto-4-hydroxyglutarate aldolase; KHG-aldolase; 2-dehydro-3-deoxy-phosphogluconate aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG-aldolase; Phospho-2-dehydro-3-deoxygluconate aldolase; Phospho-2-keto-3-deoxygluconate aldolase [H]
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MSVIEGIQEEKVVAVIRKANSDNIVPILEALAKGGIHHVEITAETPNVENVIKTAVQNVNEKIQVGAGTVLDPETARTLI LAGATFIVSPTLNIKTVEMCQRYGVEHIPGVFTPTEVLTAYEHGARMVKIFPIDAVGPNYVKNIRGPLPHVKAMVTGGIT LDNIGDYLKAGSFAVGTGSSLVNAPLLQTKEDYDELTERAKQYIQSAKEV
Sequences:
>Translated_210_residues MSVIEGIQEEKVVAVIRKANSDNIVPILEALAKGGIHHVEITAETPNVENVIKTAVQNVNEKIQVGAGTVLDPETARTLI LAGATFIVSPTLNIKTVEMCQRYGVEHIPGVFTPTEVLTAYEHGARMVKIFPIDAVGPNYVKNIRGPLPHVKAMVTGGIT LDNIGDYLKAGSFAVGTGSSLVNAPLLQTKEDYDELTERAKQYIQSAKEV >Mature_209_residues SVIEGIQEEKVVAVIRKANSDNIVPILEALAKGGIHHVEITAETPNVENVIKTAVQNVNEKIQVGAGTVLDPETARTLIL AGATFIVSPTLNIKTVEMCQRYGVEHIPGVFTPTEVLTAYEHGARMVKIFPIDAVGPNYVKNIRGPLPHVKAMVTGGITL DNIGDYLKAGSFAVGTGSSLVNAPLLQTKEDYDELTERAKQYIQSAKEV
Specific function: KEY ENZYME IN THE ENTNER-DOUDOROFF PATHWAY. PARTICIPATES IN THE REGULATION OF THE INTRACELLULAR LEVEL OF GLYOXYLATE. [C]
COG id: COG0800
COG function: function code G; 2-keto-3-deoxy-6-phosphogluconate aldolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the KHG/KDPG aldolase family [H]
Homologues:
Organism=Escherichia coli, GI48994954, Length=199, Percent_Identity=31.1557788944724, Blast_Score=110, Evalue=6e-26, Organism=Escherichia coli, GI1788156, Length=188, Percent_Identity=34.5744680851064, Blast_Score=100, Evalue=1e-22,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000887 - InterPro: IPR013785 [H]
Pfam domain/function: PF01081 Aldolase [H]
EC number: =4.1.3.16; =4.1.2.14 [H]
Molecular weight: Translated: 22585; Mature: 22454
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVIEGIQEEKVVAVIRKANSDNIVPILEALAKGGIHHVEITAETPNVENVIKTAVQNVN CCHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHC EKIQVGAGTVLDPETARTLILAGATFIVSPTLNIKTVEMCQRYGVEHIPGVFTPTEVLTA HHEEECCCCEECCHHHHEEEEECCEEEECCCCCHHHHHHHHHCCHHHCCCCCCHHHHHHH YEHGARMVKIFPIDAVGPNYVKNIRGPLPHVKAMVTGGITLDNIGDYLKAGSFAVGTGSS HHCCCEEEEEEEECCCCHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHCCCEEECCCCH LVNAPLLQTKEDYDELTERAKQYIQSAKEV HHCCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SVIEGIQEEKVVAVIRKANSDNIVPILEALAKGGIHHVEITAETPNVENVIKTAVQNVN CHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHC EKIQVGAGTVLDPETARTLILAGATFIVSPTLNIKTVEMCQRYGVEHIPGVFTPTEVLTA HHEEECCCCEECCHHHHEEEEECCEEEECCCCCHHHHHHHHHCCHHHCCCCCCHHHHHHH YEHGARMVKIFPIDAVGPNYVKNIRGPLPHVKAMVTGGITLDNIGDYLKAGSFAVGTGSS HHCCCEEEEEEEECCCCHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHCCCEEECCCCH LVNAPLLQTKEDYDELTERAKQYIQSAKEV HHCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8760912; 9384377 [H]