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The map label for this gene is ykrA [H]

Identifier: 23100054

GI number: 23100054

Start: 2659308

End: 2660099

Strand: Direct

Name: ykrA [H]

Synonym: OB2599

Alternate gene names: 23100054

Gene position: 2659308-2660099 (Clockwise)

Preceding gene: 23100053

Following gene: 23100080

Centisome position: 73.25

GC content: 33.84

Gene sequence:

>792_bases
ATGAATTATCAAGCACTTTTCTTAGATATTGATGGAACTATTTTGCGACCGGACCATACATATTCCGAACGAACGAAACA
AGCAATTAAACAAGTGAAAAATCAAGGGTTGGAAGTCTTTCTTTGTACTGGAAGACCAATTATTGAAATTGATGATTTAG
CAGATGAACTAGGTGTCAAATCATTAATTGGATACAATGGTGCCTATGCTAAATATGAAGGGAAAACAATATTAAATGAA
CCTATGCCCGAAAATGATGTAGATACGTTTTTACGTGTTGCTGCAAGCAAAAACCATGAACTCATATTATATACAAAAGA
TAAAAACCATTTCACAACATTTGAAGATGACTTTGTTAAAACATTTAAAAAGGTCTTTCAATTAAGGAAGAATGAGTTAT
TTGATAAACGTCTCAAAGATCAAATTCTCGGTATCACCGCTCTAAATGTAGATCCTAGTGAAGCTAATCACTATATGATT
AATGATAATATTCGCCCTTCTCAAGTAAATGTCAACAGCATTATCGCTGCTTTTGATATTATTCGCGTTAATATGAATAA
AGGAGAAGCAATAAAGCGTGTACTTGATGAACTCAATATTCCACTAGAGAATTCAATTGCCTTTGGTGATGGTATGAATG
ATAAGGAAATGTTACAAACCGTTGGTGTCGGATTTGCTATGGGGAACGCTGATAACGAACTGGTACAATACGCAGATTAT
CAAACTAAATCATCAGAGGATGACGGAATTTTTTATGGTCTGCAACAGTTAGGACTCGTTAAAGAAGAATAA

Upstream 100 bases:

>100_bases
ATGAAATTGATTCATTCACGTAAATTTACAGTAAATAAGTGAATACGTAACAACCAATATGATAAAATAAGTCTTATTAC
GTTAGGATAAGGAGAATACA

Downstream 100 bases:

>100_bases
TATAATTTTTTCTCGCACATAGAGGATAAGATGAATGAAAATTCTTTACCTCATAAAAAAGTCTAGAATGATAACAGCGA
TATTATGCTGTTCTTCATCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MNYQALFLDIDGTILRPDHTYSERTKQAIKQVKNQGLEVFLCTGRPIIEIDDLADELGVKSLIGYNGAYAKYEGKTILNE
PMPENDVDTFLRVAASKNHELILYTKDKNHFTTFEDDFVKTFKKVFQLRKNELFDKRLKDQILGITALNVDPSEANHYMI
NDNIRPSQVNVNSIIAAFDIIRVNMNKGEAIKRVLDELNIPLENSIAFGDGMNDKEMLQTVGVGFAMGNADNELVQYADY
QTKSSEDDGIFYGLQQLGLVKEE

Sequences:

>Translated_263_residues
MNYQALFLDIDGTILRPDHTYSERTKQAIKQVKNQGLEVFLCTGRPIIEIDDLADELGVKSLIGYNGAYAKYEGKTILNE
PMPENDVDTFLRVAASKNHELILYTKDKNHFTTFEDDFVKTFKKVFQLRKNELFDKRLKDQILGITALNVDPSEANHYMI
NDNIRPSQVNVNSIIAAFDIIRVNMNKGEAIKRVLDELNIPLENSIAFGDGMNDKEMLQTVGVGFAMGNADNELVQYADY
QTKSSEDDGIFYGLQQLGLVKEE
>Mature_263_residues
MNYQALFLDIDGTILRPDHTYSERTKQAIKQVKNQGLEVFLCTGRPIIEIDDLADELGVKSLIGYNGAYAKYEGKTILNE
PMPENDVDTFLRVAASKNHELILYTKDKNHFTTFEDDFVKTFKKVFQLRKNELFDKRLKDQILGITALNVDPSEANHYMI
NDNIRPSQVNVNSIIAAFDIIRVNMNKGEAIKRVLDELNIPLENSIAFGDGMNDKEMLQTVGVGFAMGNADNELVQYADY
QTKSSEDDGIFYGLQQLGLVKEE

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=273, Percent_Identity=29.6703296703297, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI87081790, Length=262, Percent_Identity=25.9541984732824, Blast_Score=71, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 29813; Mature: 29813

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYQALFLDIDGTILRPDHTYSERTKQAIKQVKNQGLEVFLCTGRPIIEIDDLADELGVK
CCCEEEEEECCCEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCEEEHHHHHHHHCHH
SLIGYNGAYAKYEGKTILNEPMPENDVDTFLRVAASKNHELILYTKDKNHFTTFEDDFVK
HHHCCCCCEEEECCCEEECCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHH
TFKKVFQLRKNELFDKRLKDQILGITALNVDPSEANHYMINDNIRPSQVNVNSIIAAFDI
HHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEECCCCCCCEECHHHHHHEEEE
IRVNMNKGEAIKRVLDELNIPLENSIAFGDGMNDKEMLQTVGVGFAMGNADNELVQYADY
EEEECCCCHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHCCEEECCCCHHHHHHHCC
QTKSSEDDGIFYGLQQLGLVKEE
CCCCCCCCCHHHHHHHHCCCCCC
>Mature Secondary Structure
MNYQALFLDIDGTILRPDHTYSERTKQAIKQVKNQGLEVFLCTGRPIIEIDDLADELGVK
CCCEEEEEECCCEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCEEEHHHHHHHHCHH
SLIGYNGAYAKYEGKTILNEPMPENDVDTFLRVAASKNHELILYTKDKNHFTTFEDDFVK
HHHCCCCCEEEECCCEEECCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHH
TFKKVFQLRKNELFDKRLKDQILGITALNVDPSEANHYMINDNIRPSQVNVNSIIAAFDI
HHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEECCCCCCCEECHHHHHHEEEE
IRVNMNKGEAIKRVLDELNIPLENSIAFGDGMNDKEMLQTVGVGFAMGNADNELVQYADY
EEEECCCCHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHCCEEECCCCHHHHHHHCC
QTKSSEDDGIFYGLQQLGLVKEE
CCCCCCCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]