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The map label for this gene is rpfG [H]

Identifier: 23099826

GI number: 23099826

Start: 2422228

End: 2423316

Strand: Reverse

Name: rpfG [H]

Synonym: OB2371

Alternate gene names: 23099826

Gene position: 2423316-2422228 (Counterclockwise)

Preceding gene: 23099827

Following gene: 23099825

Centisome position: 66.75

GC content: 33.98

Gene sequence:

>1089_bases
ATGAAATTAGTAAGTACGAAATTTATTCAGTCTGAAGATACATTAGCTCAATCTTTATATGATGAGCAAGGAGTAATTTT
ATTGGCTAGAGGAATGAAGTTGACCTCAGGTGTTATCCAAAAACTGTTAGATCGAGGAATAACCTATGTATATATTGAAG
GTGAGATAGACGATGACCAGTATTACGAACCAGTGATAACCGATCAGCTTCGTCAAAAAGCAGTACATACCCTTAACGAT
ACTTTTAATGGAATAAAACAAGCAGGTCTGTTAAGTAAGTCTTACGTACTTCAAACAAAAGAAACAGAGCTAAGAGAAGT
TGTAGACCAGATTTTGTATGAAGTAGAAGGTAATGAGACCACATTAACATTACTTTCGGATATAATGATCACCAATGATT
ATATTTTACAACATTCTCTTAATGTGGCTATATATTCGATTGCGATCGGAAAACAATTAAATTATACTTCCGAACAATTA
AAAGAATTAGGTATCGGAGCGTTATTACATGATGTGGGGAAAATTTTTATTGAATCGGAAATATTAAATAAACCTTCTAA
TTTAGATGAAGCTGAGTTTCAAATTATAAAAAGCCATACAAAATTAGGGTATGATTACTTAAGCAGCTATCCTGGGTTTC
CTAAAAACGTTGCGCAATGTGCCTACCAACACCATGAAAGATTAGATGGTTCTGGTTACCCTCTAGGTCTGTATGATAAA
AATATTATTCCTTACGCAAAGGTCATAGCAGTGGCAGATGTCTTTGATGCTGTAACTAGTAACCGTGTTTATAGAGATGC
TCTATTGCCGCATGAAGCGCTGGAAATTCTATATGCTGGTGCAGTCAGGGAATTTGATATACAAATTATTGAGGCATTTA
AAAAAAGTATCTCTGTGTATCCGGAAGGTTTAATGGTAAATTTAAGCGATGGAACTTCTGGAAAGGTAGTTAGACAAAAT
AAATATTTATGCGATCGGCCAATTATTCGTGTGACTGAAGTACAAGGAGAGATACTCGATAATCCGTATGAATTAAATTT
AGGAAAAGTGATGAATACACTTATTACGGAAGTTATCAAAAATACATAA

Upstream 100 bases:

>100_bases
TTTTTAAATTATCAGTGAAATTAAGATAGGCATAAGAAGGATTATTTGGTACTATATTACTAATAGAATGTTGAAAGATG
TCGGATTACGGGAGAAATCT

Downstream 100 bases:

>100_bases
TCCATAGTTCTACCCACTCTAAGAACAAGCATACATTGTGAAGAGGGGGTATGAATGTTGAGGTTCAAAAGAAGATATCG
CATCCGTAGAAGAACATACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MKLVSTKFIQSEDTLAQSLYDEQGVILLARGMKLTSGVIQKLLDRGITYVYIEGEIDDDQYYEPVITDQLRQKAVHTLND
TFNGIKQAGLLSKSYVLQTKETELREVVDQILYEVEGNETTLTLLSDIMITNDYILQHSLNVAIYSIAIGKQLNYTSEQL
KELGIGALLHDVGKIFIESEILNKPSNLDEAEFQIIKSHTKLGYDYLSSYPGFPKNVAQCAYQHHERLDGSGYPLGLYDK
NIIPYAKVIAVADVFDAVTSNRVYRDALLPHEALEILYAGAVREFDIQIIEAFKKSISVYPEGLMVNLSDGTSGKVVRQN
KYLCDRPIIRVTEVQGEILDNPYELNLGKVMNTLITEVIKNT

Sequences:

>Translated_362_residues
MKLVSTKFIQSEDTLAQSLYDEQGVILLARGMKLTSGVIQKLLDRGITYVYIEGEIDDDQYYEPVITDQLRQKAVHTLND
TFNGIKQAGLLSKSYVLQTKETELREVVDQILYEVEGNETTLTLLSDIMITNDYILQHSLNVAIYSIAIGKQLNYTSEQL
KELGIGALLHDVGKIFIESEILNKPSNLDEAEFQIIKSHTKLGYDYLSSYPGFPKNVAQCAYQHHERLDGSGYPLGLYDK
NIIPYAKVIAVADVFDAVTSNRVYRDALLPHEALEILYAGAVREFDIQIIEAFKKSISVYPEGLMVNLSDGTSGKVVRQN
KYLCDRPIIRVTEVQGEILDNPYELNLGKVMNTLITEVIKNT
>Mature_362_residues
MKLVSTKFIQSEDTLAQSLYDEQGVILLARGMKLTSGVIQKLLDRGITYVYIEGEIDDDQYYEPVITDQLRQKAVHTLND
TFNGIKQAGLLSKSYVLQTKETELREVVDQILYEVEGNETTLTLLSDIMITNDYILQHSLNVAIYSIAIGKQLNYTSEQL
KELGIGALLHDVGKIFIESEILNKPSNLDEAEFQIIKSHTKLGYDYLSSYPGFPKNVAQCAYQHHERLDGSGYPLGLYDK
NIIPYAKVIAVADVFDAVTSNRVYRDALLPHEALEILYAGAVREFDIQIIEAFKKSISVYPEGLMVNLSDGTSGKVVRQN
KYLCDRPIIRVTEVQGEILDNPYELNLGKVMNTLITEVIKNT

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 40757; Mature: 40757

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVSTKFIQSEDTLAQSLYDEQGVILLARGMKLTSGVIQKLLDRGITYVYIEGEIDDDQ
CCCCCHHHHCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEEEECCCC
YYEPVITDQLRQKAVHTLNDTFNGIKQAGLLSKSYVLQTKETELREVVDQILYEVEGNET
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEECCHHHHHHHHHHHHHHCCCCCC
TLTLLSDIMITNDYILQHSLNVAIYSIAIGKQLNYTSEQLKELGIGALLHDVGKIFIESE
HHHHHHHHHHHCHHHHHHHCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ILNKPSNLDEAEFQIIKSHTKLGYDYLSSYPGFPKNVAQCAYQHHERLDGSGYPLGLYDK
HHCCCCCCCHHHHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCC
NIIPYAKVIAVADVFDAVTSNRVYRDALLPHEALEILYAGAVREFDIQIIEAFKKSISVY
CCCHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
PEGLMVNLSDGTSGKVVRQNKYLCDRPIIRVTEVQGEILDNPYELNLGKVMNTLITEVIK
CCCEEEEECCCCCCCEEECCCCCCCCCCEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHH
NT
CC
>Mature Secondary Structure
MKLVSTKFIQSEDTLAQSLYDEQGVILLARGMKLTSGVIQKLLDRGITYVYIEGEIDDDQ
CCCCCHHHHCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEEEECCCC
YYEPVITDQLRQKAVHTLNDTFNGIKQAGLLSKSYVLQTKETELREVVDQILYEVEGNET
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEECCHHHHHHHHHHHHHHCCCCCC
TLTLLSDIMITNDYILQHSLNVAIYSIAIGKQLNYTSEQLKELGIGALLHDVGKIFIESE
HHHHHHHHHHHCHHHHHHHCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ILNKPSNLDEAEFQIIKSHTKLGYDYLSSYPGFPKNVAQCAYQHHERLDGSGYPLGLYDK
HHCCCCCCCHHHHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCC
NIIPYAKVIAVADVFDAVTSNRVYRDALLPHEALEILYAGAVREFDIQIIEAFKKSISVY
CCCHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
PEGLMVNLSDGTSGKVVRQNKYLCDRPIIRVTEVQGEILDNPYELNLGKVMNTLITEVIK
CCCEEEEECCCCCCCEEECCCCCCCCCCEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHH
NT
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]