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The map label for this gene is gerE [H]

Identifier: 23099565

GI number: 23099565

Start: 2144291

End: 2144515

Strand: Direct

Name: gerE [H]

Synonym: OB2110

Alternate gene names: 23099565

Gene position: 2144291-2144515 (Clockwise)

Preceding gene: 23099552

Following gene: 23099570

Centisome position: 59.06

GC content: 38.22

Gene sequence:

>225_bases
TTGAAGGACAACGAGTATAAACCGAAGCAATTATTAACCAAACGCGAGAAAGAAGTGTTTGAACTATTAGTACAGGATAA
AACAACAAAAGAAATTGCACAAGAGTTGTTTATTTCCGAAAAAACTGTCCGGAACCATATTTCAAATGCTATGCAAAAAT
TGGGAGTCAAGGGACGGTCACAAGCCGTAGTTGAGCTTCTTCGCATGGGGGAATTAAAGCTGTAA

Upstream 100 bases:

>100_bases
GCACAAATATACGCACTAATTTTTTCTATAATCATAAGCTATATTGACTAAATAATTTCCCTTCATCATGCAGCTCTATA
GAGCAAGGAGGGGGTAACAT

Downstream 100 bases:

>100_bases
TAAAACCGACTACCCTTATAAGGGAGTCGGTTTTACTTGTGTTTTGATAAAATTTCTACTCATAAGTTTTTCTTTCATAT
CTTCTGTTAATGGTTTAGAT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 74; Mature: 74

Protein sequence:

>74_residues
MKDNEYKPKQLLTKREKEVFELLVQDKTTKEIAQELFISEKTVRNHISNAMQKLGVKGRSQAVVELLRMGELKL

Sequences:

>Translated_74_residues
MKDNEYKPKQLLTKREKEVFELLVQDKTTKEIAQELFISEKTVRNHISNAMQKLGVKGRSQAVVELLRMGELKL
>Mature_74_residues
MKDNEYKPKQLLTKREKEVFELLVQDKTTKEIAQELFISEKTVRNHISNAMQKLGVKGRSQAVVELLRMGELKL

Specific function: Involved in the regulation of spore formation. Directs the transcription of several genes that encode structural components of the protein coat that encases the mature spore (CotB, CotC, CotG, CotS, CotV, CotW, CotX, CotY and CotZ). Controls also the cgeA

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016032
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 8629; Mature: 8629

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDNEYKPKQLLTKREKEVFELLVQDKTTKEIAQELFISEKTVRNHISNAMQKLGVKGRS
CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
QAVVELLRMGELKL
HHHHHHHHHCCCCC
>Mature Secondary Structure
MKDNEYKPKQLLTKREKEVFELLVQDKTTKEIAQELFISEKTVRNHISNAMQKLGVKGRS
CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
QAVVELLRMGELKL
HHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3114423; 8969504; 9384377; 2474075; 11243786 [H]