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The map label for this gene is cccA [H]

Identifier: 23099397

GI number: 23099397

Start: 1968834

End: 1969229

Strand: Reverse

Name: cccA [H]

Synonym: OB1942

Alternate gene names: 23099397

Gene position: 1969229-1968834 (Counterclockwise)

Preceding gene: 23099398

Following gene: 23099396

Centisome position: 54.24

GC content: 39.9

Gene sequence:

>396_bases
ATGAAAAAAAACCCGGTTATACCATATGCGATTATTGCTGTTATCGGGATCCTTGCTGTAATTATTATTTCAGTAGTTGG
GATTGATCAAAGACAAGCTATTCAAGACGCTGAAGAAAATGGTGGGGAACAAACCGAGCAATCTGAAGAAGGCGAAGGCG
GTGGAGAAACTGCTGGAGGAGACGGAGATGCAGTTTTCCAAAATAATTGCGCAATGTGTCATGGATCCGATTTAGCTAGT
GGATCAGCACCTAATTTAACTGAGATAGGAAGCAAATATTCTCAAGAAGAACTTGCTCAAATTGTACAAGAAGGTATAGG
TAATATGCCAGCACAGTCTCAAGTTCAAGGTGAAGATTTAGATGCTTTAACACAATGGCTAAGTGAGAAACAGTAA

Upstream 100 bases:

>100_bases
AAATTTTCTATGATAATCCTTTAAAATTATCCAATTTTAAAGTACACTATATATAGTCTTTTATATATGCATTAAGGGGA
TTACATAAGGAGGAAGCATA

Downstream 100 bases:

>100_bases
TTATAAGTTTAAATGAATGAAAGCTTTCTGCTTAAAAATCAGAAAGCTTTTCTTAATGTAGAAGGTGAATTAAGTAATGC
GTAATAGAGTTAGTTTATCA

Product: cytochrome c551

Products: NA

Alternate protein names: Cytochrome c551 [H]

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MKKNPVIPYAIIAVIGILAVIIISVVGIDQRQAIQDAEENGGEQTEQSEEGEGGGETAGGDGDAVFQNNCAMCHGSDLAS
GSAPNLTEIGSKYSQEELAQIVQEGIGNMPAQSQVQGEDLDALTQWLSEKQ

Sequences:

>Translated_131_residues
MKKNPVIPYAIIAVIGILAVIIISVVGIDQRQAIQDAEENGGEQTEQSEEGEGGGETAGGDGDAVFQNNCAMCHGSDLAS
GSAPNLTEIGSKYSQEELAQIVQEGIGNMPAQSQVQGEDLDALTQWLSEKQ
>Mature_131_residues
MKKNPVIPYAIIAVIGILAVIIISVVGIDQRQAIQDAEENGGEQTEQSEEGEGGGETAGGDGDAVFQNNCAMCHGSDLAS
GSAPNLTEIGSKYSQEELAQIVQEGIGNMPAQSQVQGEDLDALTQWLSEKQ

Specific function: Appears to mediate electron flow from the cytochrome b6f complex to an alternative terminal oxidase [H]

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012218
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 13702; Mature: 13702

Theoretical pI: Translated: 3.68; Mature: 3.68

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNPVIPYAIIAVIGILAVIIISVVGIDQRQAIQDAEENGGEQTEQSEEGEGGGETAGG
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCC
DGDAVFQNNCAMCHGSDLASGSAPNLTEIGSKYSQEELAQIVQEGIGNMPAQSQVQGEDL
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCH
DALTQWLSEKQ
HHHHHHHHCCC
>Mature Secondary Structure
MKKNPVIPYAIIAVIGILAVIIISVVGIDQRQAIQDAEENGGEQTEQSEEGEGGGETAGG
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCC
DGDAVFQNNCAMCHGSDLASGSAPNLTEIGSKYSQEELAQIVQEGIGNMPAQSQVQGEDL
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCH
DALTQWLSEKQ
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7916623 [H]