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The map label for this gene is ypdA [H]

Identifier: 23099264

GI number: 23099264

Start: 1845409

End: 1846401

Strand: Reverse

Name: ypdA [H]

Synonym: OB1809

Alternate gene names: 23099264

Gene position: 1846401-1845409 (Counterclockwise)

Preceding gene: 23099265

Following gene: 23099263

Centisome position: 50.86

GC content: 32.63

Gene sequence:

>993_bases
ATGCAACAAGAAGATGTTATTATAATTGGTGCAGGTCCATGTGGTATGGCTACTGCTCTTGAACTGCAAAAAAACGGCAT
AGAACCATTACTAATAGAAAAAGGGAACGTTGCTCAGACGATAAGTAATTACCCTACACATCAGACTTTTTTTAGTTCAA
GTGACAAACTTGAGATTGGCGATGTTCCTTTTATTACTGAAAATAAGAAACCGGTAAGAAATCAAGCGATGGTTTATTAT
AGAGAAGTTGCACAAAGAAAAGAACTACGTATACGTCCCTATGAAGAAGTAATAGGACTAGTAAAAAATAAAAATGGTAA
AGGCTATACAATTACTACATCAAATATACATAAAGAACAAAATGTATATTATGCGGCTTATGTTATATTAGCGACGGGTT
ATTATGATCAACCTAATTATCTAGAGGTTCCCGGTGAATCAAAACCAAAAGTAACGCATTATTTTAAAGAAGCTCATCCA
TACTTTAATCAAAATGTTGTTGTTATAGGAGGTAAAAATTCCTCCGTAGATGCTACAATTGAATTACATAAAGCTGGTGC
TCATGTAACTGTCTTATATCGAGGTAGTAATTATTCTAAAAGTATTAAACCTTGGATTCTTCCTGAGTTTGAGTCATTAG
TTCGTAATGGAAAAGTAAATATGGTATTTGAATCCACAGTTAAAGAAATTAATGACCACTCATTAACGTATGAATCTCAA
GGTGAATCGTATACAATAGATAATGATTTTGTATTTGCGATGACGGGCTATCAGCCTAATTATTCCTTATTAAGACAAGC
AGGCGTGGAAATAATTAAGGAAACCGGAAAACCTCAATTTGATAAAGAAACTCTGGAGACAAATGTAGACGATTTATATA
TTGCTGGAGTAATTGCTGCAGGATACGATAATAATAAAGTATTTATTGAAAATGGTCGTTTTCATGGAAAACCAATAGCA
GAATCAATATTGCGTAAACAAAAGAATATATAA

Upstream 100 bases:

>100_bases
AAACAAAGTATATTCCCATACGACGGTTGAATTTTTCTTTAGAATAATTTCATTTGTATCAGCGCTATTTTTAATCTTGC
AAGGAAAGAAGGACAATTTC

Downstream 100 bases:

>100_bases
CCATATATCCACGAAGTTAGGTACTTTGTGGATTTTTATTCCCTATGTTTTATTTTTTAATATATTTTAAATAGAGATTG
TATATTTTAAGTAAGATATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MQQEDVIIIGAGPCGMATALELQKNGIEPLLIEKGNVAQTISNYPTHQTFFSSSDKLEIGDVPFITENKKPVRNQAMVYY
REVAQRKELRIRPYEEVIGLVKNKNGKGYTITTSNIHKEQNVYYAAYVILATGYYDQPNYLEVPGESKPKVTHYFKEAHP
YFNQNVVVIGGKNSSVDATIELHKAGAHVTVLYRGSNYSKSIKPWILPEFESLVRNGKVNMVFESTVKEINDHSLTYESQ
GESYTIDNDFVFAMTGYQPNYSLLRQAGVEIIKETGKPQFDKETLETNVDDLYIAGVIAAGYDNNKVFIENGRFHGKPIA
ESILRKQKNI

Sequences:

>Translated_330_residues
MQQEDVIIIGAGPCGMATALELQKNGIEPLLIEKGNVAQTISNYPTHQTFFSSSDKLEIGDVPFITENKKPVRNQAMVYY
REVAQRKELRIRPYEEVIGLVKNKNGKGYTITTSNIHKEQNVYYAAYVILATGYYDQPNYLEVPGESKPKVTHYFKEAHP
YFNQNVVVIGGKNSSVDATIELHKAGAHVTVLYRGSNYSKSIKPWILPEFESLVRNGKVNMVFESTVKEINDHSLTYESQ
GESYTIDNDFVFAMTGYQPNYSLLRQAGVEIIKETGKPQFDKETLETNVDDLYIAGVIAAGYDNNKVFIENGRFHGKPIA
ESILRKQKNI
>Mature_330_residues
MQQEDVIIIGAGPCGMATALELQKNGIEPLLIEKGNVAQTISNYPTHQTFFSSSDKLEIGDVPFITENKKPVRNQAMVYY
REVAQRKELRIRPYEEVIGLVKNKNGKGYTITTSNIHKEQNVYYAAYVILATGYYDQPNYLEVPGESKPKVTHYFKEAHP
YFNQNVVVIGGKNSSVDATIELHKAGAHVTVLYRGSNYSKSIKPWILPEFESLVRNGKVNMVFESTVKEINDHSLTYESQ
GESYTIDNDFVFAMTGYQPNYSLLRQAGVEIIKETGKPQFDKETLETNVDDLYIAGVIAAGYDNNKVFIENGRFHGKPIA
ESILRKQKNI

Specific function: Unknown

COG id: COG0492

COG function: function code O; Thioredoxin reductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013027
- InterPro:   IPR001327
- InterPro:   IPR000103 [H]

Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]

EC number: NA

Molecular weight: Translated: 37223; Mature: 37223

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQEDVIIIGAGPCGMATALELQKNGIEPLLIEKGNVAQTISNYPTHQTFFSSSDKLEIG
CCCCCEEEEECCCCCCHHHHHHHHCCCCEEEEECCCHHHHHHCCCCCHHEECCCCCEEEC
DVPFITENKKPVRNQAMVYYREVAQRKELRIRPYEEVIGLVKNKNGKGYTITTSNIHKEQ
CCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCC
NVYYAAYVILATGYYDQPNYLEVPGESKPKVTHYFKEAHPYFNQNVVVIGGKNSSVDATI
CEEEEEEEEEEECCCCCCCEEECCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCEEEEE
ELHKAGAHVTVLYRGSNYSKSIKPWILPEFESLVRNGKVNMVFESTVKEINDHSLTYESQ
EEEECCCEEEEEEECCCCCCCCCCCCCCCHHHHHHCCCEEEEEHHHHHHCCCCCEEEECC
GESYTIDNDFVFAMTGYQPNYSLLRQAGVEIIKETGKPQFDKETLETNVDDLYIAGVIAA
CCEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEEEEEE
GYDNNKVFIENGRFHGKPIAESILRKQKNI
CCCCCEEEEECCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MQQEDVIIIGAGPCGMATALELQKNGIEPLLIEKGNVAQTISNYPTHQTFFSSSDKLEIG
CCCCCEEEEECCCCCCHHHHHHHHCCCCEEEEECCCHHHHHHCCCCCHHEECCCCCEEEC
DVPFITENKKPVRNQAMVYYREVAQRKELRIRPYEEVIGLVKNKNGKGYTITTSNIHKEQ
CCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCC
NVYYAAYVILATGYYDQPNYLEVPGESKPKVTHYFKEAHPYFNQNVVVIGGKNSSVDATI
CEEEEEEEEEEECCCCCCCEEECCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCEEEEE
ELHKAGAHVTVLYRGSNYSKSIKPWILPEFESLVRNGKVNMVFESTVKEINDHSLTYESQ
EEEECCCEEEEEEECCCCCCCCCCCCCCCHHHHHHCCCEEEEEHHHHHHCCCCCEEEECC
GESYTIDNDFVFAMTGYQPNYSLLRQAGVEIIKETGKPQFDKETLETNVDDLYIAGVIAA
CCEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCEEEEEEEEE
GYDNNKVFIENGRFHGKPIAESILRKQKNI
CCCCCEEEEECCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]