Click here to switch to the map view.

The map label for this gene is fliP [H]

Identifier: 23099026

GI number: 23099026

Start: 1609891

End: 1610556

Strand: Direct

Name: fliP [H]

Synonym: OB1571

Alternate gene names: 23099026

Gene position: 1609891-1610556 (Clockwise)

Preceding gene: 23099025

Following gene: 23099027

Centisome position: 44.34

GC content: 32.73

Gene sequence:

>666_bases
ATGAATGAATTTATTGACATTTTTTCTAGCTCTGATCCAACCAATATTTCTACTTCCGTAAAATTATTATTACTATTAAC
GATTTTTTCATTAGCACCAGGAATCCTAATTTTAATGACAAGTTTTACTAGAATAATTATTGTTCTTTCATTTGTAAGGA
CATCCTTAGCAACACAACAAATGCCTCCTAACCAAGTTTTAATAGGGATTGCATTGTTTATGAGCTTTTTTATTATGGCT
CCAACTTTCACAGAAGTATATGAAGAGGGACTTGGCCCACTATTTAATGAAGAAATAACCTTGGATGAAGCATATGAGAA
TGCAAGTATTCCGTTAAAAGAATTTATGGCTCAACACACAAGGCAAAAAGATTTGGAGTTATTTTTAAATTACACTCAAG
CCGATCCTCCTGAGACTATTGAAGATATACCACTCACTACACTTGTCCCGGCATTTGCAATAAGTGAGCTGAAAACAGCT
TTTCAAATGGGATTTTTGATATTTATTCCCTTTTTAATTATTGATATGGCTGTAGCGAGTATTTTAATGTCTATGGGTAT
GATGATGCTTCCACCTGTAATGATTTCACTGCCATTCAAGATATTATTATTTGTACTTGTGGATGGATGGTATCTTATCA
CTCAATCTTTATTAGGTGGTTTTTAG

Upstream 100 bases:

>100_bases
AATAATTCAGACCAATCGTTCGAAAAACTTTTTGAACAGGAACTGAATAGCCTTAAATCCAATCGAAATAAAATGATACA
AAAGTATAAGGAAGATTCTC

Downstream 100 bases:

>100_bases
AAAGGAGCATATGTCATGAGTAGTGAATTAGTTTTAACGTTAGCTGAACAGGGCGTCGTTACTATCTTATTAATTACCGT
TCCTTTATTGTTACTAGCAT

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MNEFIDIFSSSDPTNISTSVKLLLLLTIFSLAPGILILMTSFTRIIIVLSFVRTSLATQQMPPNQVLIGIALFMSFFIMA
PTFTEVYEEGLGPLFNEEITLDEAYENASIPLKEFMAQHTRQKDLELFLNYTQADPPETIEDIPLTTLVPAFAISELKTA
FQMGFLIFIPFLIIDMAVASILMSMGMMMLPPVMISLPFKILLFVLVDGWYLITQSLLGGF

Sequences:

>Translated_221_residues
MNEFIDIFSSSDPTNISTSVKLLLLLTIFSLAPGILILMTSFTRIIIVLSFVRTSLATQQMPPNQVLIGIALFMSFFIMA
PTFTEVYEEGLGPLFNEEITLDEAYENASIPLKEFMAQHTRQKDLELFLNYTQADPPETIEDIPLTTLVPAFAISELKTA
FQMGFLIFIPFLIIDMAVASILMSMGMMMLPPVMISLPFKILLFVLVDGWYLITQSLLGGF
>Mature_221_residues
MNEFIDIFSSSDPTNISTSVKLLLLLTIFSLAPGILILMTSFTRIIIVLSFVRTSLATQQMPPNQVLIGIALFMSFFIMA
PTFTEVYEEGLGPLFNEEITLDEAYENASIPLKEFMAQHTRQKDLELFLNYTQADPPETIEDIPLTTLVPAFAISELKTA
FQMGFLIFIPFLIIDMAVASILMSMGMMMLPPVMISLPFKILLFVLVDGWYLITQSLLGGF

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=205, Percent_Identity=51.219512195122, Blast_Score=214, Evalue=4e-57,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 24754; Mature: 24754

Theoretical pI: Translated: 3.92; Mature: 3.92

Prosite motif: PS01060 FLIP_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEFIDIFSSSDPTNISTSVKLLLLLTIFSLAPGILILMTSFTRIIIVLSFVRTSLATQQ
CCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
MPPNQVLIGIALFMSFFIMAPTFTEVYEEGLGPLFNEEITLDEAYENASIPLKEFMAQHT
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHCCCCCHHHHHCCCCCCHHHHHHHHH
RQKDLELFLNYTQADPPETIEDIPLTTLVPAFAISELKTAFQMGFLIFIPFLIIDMAVAS
HHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILMSMGMMMLPPVMISLPFKILLFVLVDGWYLITQSLLGGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNEFIDIFSSSDPTNISTSVKLLLLLTIFSLAPGILILMTSFTRIIIVLSFVRTSLATQQ
CCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
MPPNQVLIGIALFMSFFIMAPTFTEVYEEGLGPLFNEEITLDEAYENASIPLKEFMAQHT
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHCCCCCHHHHHCCCCCCHHHHHHHHH
RQKDLELFLNYTQADPPETIEDIPLTTLVPAFAISELKTAFQMGFLIFIPFLIIDMAVAS
HHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILMSMGMMMLPPVMISLPFKILLFVLVDGWYLITQSLLGGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1597417; 9384377 [H]