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The map label for this gene is flgD [H]

Identifier: 23099017

GI number: 23099017

Start: 1604155

End: 1604673

Strand: Direct

Name: flgD [H]

Synonym: OB1562

Alternate gene names: 23099017

Gene position: 1604155-1604673 (Clockwise)

Preceding gene: 23099016

Following gene: 23099018

Centisome position: 44.19

GC content: 36.99

Gene sequence:

>519_bases
ATGACTTCAATTGATTCATCTTTATATTTAAACAACCAACAGAAAGCACGTGTACCTAGTCAAGAGTTAGGAAAAGATGA
ATTTTTGAAACTATTGATGGTGCAGTTACAAAATCAAGATCCAACTAAGCCGATGGATGATTCACAATTTATGTCGCAGA
TGGCAACTTTTTCATCCTTAGAGCAAATGATGAATATGTCCAACTCAATAGAAATGTTAGTGAACAATTCACTCGTTTCT
CCTGTTCTTCAATACAGCCATATGATTGGAGAGGAAGTGTCGTATATGACATTTGATGAAGAAACAGGGAAAGAGACTGG
GATAGAAACCAGTATAGTAGTTGGAGTCACTCAAAACGAAGGCTGGGCAGTTTTTGAATTAGAAAATGGTGAACGAATTT
ATGCAGATACAGTTATTCAAGTTGGGGAATCAAATGCTGAAGATGGTGACGATGATAGTGATATAGATGGTGACGAAGAT
GACTCTGATTCTGGTGATGGAGAGGAAAGTGAAGACTAA

Upstream 100 bases:

>100_bases
GAACCAACAAACAGATGATGATGAAAAAGATACAGGATCATATGATTTTGAAGAGTTTATGACGGAATTACTCAATGAAA
AAATTTAGGTGGGTGAAAAA

Downstream 100 bases:

>100_bases
TGGATCACCGTATTTATCAGACACCACCATTAATTGTACCACCAACGAAAAAGAGTCAATCACCAAAACAATCAACTGTT
TCATTTAAAGACGTACTGCA

Product: flagellar basal body rod modification protein

Products: NA

Alternate protein names: ORF 8 [H]

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MTSIDSSLYLNNQQKARVPSQELGKDEFLKLLMVQLQNQDPTKPMDDSQFMSQMATFSSLEQMMNMSNSIEMLVNNSLVS
PVLQYSHMIGEEVSYMTFDEETGKETGIETSIVVGVTQNEGWAVFELENGERIYADTVIQVGESNAEDGDDDSDIDGDED
DSDSGDGEESED

Sequences:

>Translated_172_residues
MTSIDSSLYLNNQQKARVPSQELGKDEFLKLLMVQLQNQDPTKPMDDSQFMSQMATFSSLEQMMNMSNSIEMLVNNSLVS
PVLQYSHMIGEEVSYMTFDEETGKETGIETSIVVGVTQNEGWAVFELENGERIYADTVIQVGESNAEDGDDDSDIDGDED
DSDSGDGEESED
>Mature_171_residues
TSIDSSLYLNNQQKARVPSQELGKDEFLKLLMVQLQNQDPTKPMDDSQFMSQMATFSSLEQMMNMSNSIEMLVNNSLVSP
VLQYSHMIGEEVSYMTFDEETGKETGIETSIVVGVTQNEGWAVFELENGERIYADTVIQVGESNAEDGDDDSDIDGDEDD
SDSGDGEESED

Specific function: Required For Flagellar Hook Formation. May Act As A Scaffolding Protein. [C]

COG id: COG1843

COG function: function code N; Flagellar hook capping protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgD family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005648 [H]

Pfam domain/function: PF03963 FlgD [H]

EC number: NA

Molecular weight: Translated: 19107; Mature: 18976

Theoretical pI: Translated: 3.45; Mature: 3.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSIDSSLYLNNQQKARVPSQELGKDEFLKLLMVQLQNQDPTKPMDDSQFMSQMATFSSL
CCCCCCCEEECCCHHHCCCHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
EQMMNMSNSIEMLVNNSLVSPVLQYSHMIGEEVSYMTFDEETGKETGIETSIVVGVTQNE
HHHHCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEEEECCC
GWAVFELENGERIYADTVIQVGESNAEDGDDDSDIDGDEDDSDSGDGEESED
CEEEEEECCCCEEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TSIDSSLYLNNQQKARVPSQELGKDEFLKLLMVQLQNQDPTKPMDDSQFMSQMATFSSL
CCCCCCEEECCCHHHCCCHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
EQMMNMSNSIEMLVNNSLVSPVLQYSHMIGEEVSYMTFDEETGKETGIETSIVVGVTQNE
HHHHCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEEEECCC
GWAVFELENGERIYADTVIQVGESNAEDGDDDSDIDGDEDDSDSGDGEESED
CEEEEEECCCCEEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1828465; 9384377 [H]