Click here to switch to the map view.

The map label for this gene is ywoH [H]

Identifier: 23098653

GI number: 23098653

Start: 1249205

End: 1249624

Strand: Reverse

Name: ywoH [H]

Synonym: OB1198

Alternate gene names: 23098653

Gene position: 1249624-1249205 (Counterclockwise)

Preceding gene: 23098654

Following gene: 23098652

Centisome position: 34.42

GC content: 30.71

Gene sequence:

>420_bases
ATGGATAATATAAAGAGCAAAGATATTCTACACTTATACAATCAAAAATATCGTTATTTTAATAAAGAAATGAATCAACG
CTTACGAAAATATGATTTATATGCCTCACAATGGGCAATCCTGTATTGCCTTGATCAGTCAGGACCTTTAACGCAAACAG
ACATATGGAAATACCTAAATATAGAAGCTCCTACAGTAACACGAACTTTATCTAGACTTGAAAAAAATGGTTGGGTAGAG
AGGTTACCTGGTGAAGATAAAAGAGAAAAGATGATTTATTTAACCGAAGAAGCTAAGAAAGAATTACCGAATGTAAAAAT
AACCATGAAACAGTTTGATGATGATATGCTTCAACAATTAGATCAGAATGAAAGGAAATTATTATATCAACTACTTAGTA
AATTAACATCAGAGGTGTAA

Upstream 100 bases:

>100_bases
TTCGGTTACCAACCCAAAAAAGGTATTTACATAACGTAACAAGAGGTATAGAATTGTTCAAGTGAATTTATTTATCTAGG
TAAATAATTAGGAGGACGGC

Downstream 100 bases:

>100_bases
AAATTGAATCTCGAAAAAATTTGGACGAAAAGTTTTATTAGTATTTCTCTTGTACAACTATTAATATTTTTATCTTTTTA
TGCGTTATTAACTACTCTTC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MDNIKSKDILHLYNQKYRYFNKEMNQRLRKYDLYASQWAILYCLDQSGPLTQTDIWKYLNIEAPTVTRTLSRLEKNGWVE
RLPGEDKREKMIYLTEEAKKELPNVKITMKQFDDDMLQQLDQNERKLLYQLLSKLTSEV

Sequences:

>Translated_139_residues
MDNIKSKDILHLYNQKYRYFNKEMNQRLRKYDLYASQWAILYCLDQSGPLTQTDIWKYLNIEAPTVTRTLSRLEKNGWVE
RLPGEDKREKMIYLTEEAKKELPNVKITMKQFDDDMLQQLDQNERKLLYQLLSKLTSEV
>Mature_139_residues
MDNIKSKDILHLYNQKYRYFNKEMNQRLRKYDLYASQWAILYCLDQSGPLTQTDIWKYLNIEAPTVTRTLSRLEKNGWVE
RLPGEDKREKMIYLTEEAKKELPNVKITMKQFDDDMLQQLDQNERKLLYQLLSKLTSEV

Specific function: Repressor Of The Marrab Operon Which Is Involved In The Activation Of Both Antibiotic Resistance And Oxidative Stress Genes. Binds To The Maro Operator/Promoter Site. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16801; Mature: 16801

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNIKSKDILHLYNQKYRYFNKEMNQRLRKYDLYASQWAILYCLDQSGPLTQTDIWKYLN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCHHHHHHHHC
IEAPTVTRTLSRLEKNGWVERLPGEDKREKMIYLTEEAKKELPNVKITMKQFDDDMLQQL
CCCCHHHHHHHHHHHCCCEECCCCCCCCCCEEEEEHHHHHHCCCCEEHHHHCCHHHHHHH
DQNERKLLYQLLSKLTSEV
CCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDNIKSKDILHLYNQKYRYFNKEMNQRLRKYDLYASQWAILYCLDQSGPLTQTDIWKYLN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCHHHHHHHHC
IEAPTVTRTLSRLEKNGWVERLPGEDKREKMIYLTEEAKKELPNVKITMKQFDDDMLQQL
CCCCHHHHHHHHHHHCCCEECCCCCCCCCCEEEEEHHHHHHCCCCEEHHHHCCHHHHHHH
DQNERKLLYQLLSKLTSEV
CCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]