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The map label for this gene is yitS [H]

Identifier: 23098643

GI number: 23098643

Start: 1242580

End: 1243443

Strand: Reverse

Name: yitS [H]

Synonym: OB1188

Alternate gene names: 23098643

Gene position: 1243443-1242580 (Counterclockwise)

Preceding gene: 23098646

Following gene: 23098642

Centisome position: 34.25

GC content: 34.14

Gene sequence:

>864_bases
ATGGCGATAACAATATTAACTGATAGTGCTTGTGACTTGTCAAAGAAATATTATAACGAAAACAACATTGAAATGATACC
ATTAACTGTTCATCTAGACAATGAAGAGTTTGAAGATGGCCGTACCATCAATCCAAAAACCGTCTATGAAGCGATGCGAA
ATGGTAAATCACCAAAAACATCACAGGCTTCTGCACAAGATTTTAAAGATATATTTACAAAACATGCTGAAGAGAATCAA
TCATTAATTTATATTGCTTTTTCTTCAGAACTTTCTGGAACTTACCAATCTGCTAAAATGATGGAATTGGAAGTAAAAGA
GACGTATCCAGATGCGGATATATATGTAATCGATTCAAAATGCGCATCATTTGGACATGGTTTAGTAGTCCTAGAAGCTG
CAAAGTTAGCTAATAATGGTGCTACTGTAAATGAAATCATTGAAAAGGTTGATTATCATGCAAAACATATGGAACATATA
TTTACAGTGGATGATTTAGAATACTTATATCGTGGCGGTCGTGTAAGTAAAACTGCAGCCTTTGTAGGAGGTTTATTAAA
AATAAAGCCCCTTCTTCATGTTGAAGATGGAAAACTTATACCTCTAGAAAAAATTCGGGGATCGAAAAAAGTACTTCAAC
GCATGGTTGATGTCATGGAATCCCGAGGTCAAGACTTTGAAAATCAAACAATTGGAATTAGCCACGGTGATGATCTCTCT
CGTGCTGAACAATTATCAGAAATGATACAAGAAAAATTTAACGTAGCAAAAGAGAATATTATAATTGAAATGGTAGGATC
TGCAATTGGTTCTCACTCAGGTCCAGGTACACTGGCATTATTTTTCTTAAATACAAATAAATAG

Upstream 100 bases:

>100_bases
CCCCCTTTAACTATGTGAAGAAATAATAACTTTTTGACTAAAATTTTAAATACATTTAAACTAAAATAAAGTCTAAAACA
AGAAAAGTAGGTGAAGTACG

Downstream 100 bases:

>100_bases
AAATCATCCTTACGACGAATTATCCCCTTATATATAGACAATTAAACGTTCTATTATCACAATGGTTTTATTTTTACTTA
TTAAACTTGTTCTATATTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MAITILTDSACDLSKKYYNENNIEMIPLTVHLDNEEFEDGRTINPKTVYEAMRNGKSPKTSQASAQDFKDIFTKHAEENQ
SLIYIAFSSELSGTYQSAKMMELEVKETYPDADIYVIDSKCASFGHGLVVLEAAKLANNGATVNEIIEKVDYHAKHMEHI
FTVDDLEYLYRGGRVSKTAAFVGGLLKIKPLLHVEDGKLIPLEKIRGSKKVLQRMVDVMESRGQDFENQTIGISHGDDLS
RAEQLSEMIQEKFNVAKENIIIEMVGSAIGSHSGPGTLALFFLNTNK

Sequences:

>Translated_287_residues
MAITILTDSACDLSKKYYNENNIEMIPLTVHLDNEEFEDGRTINPKTVYEAMRNGKSPKTSQASAQDFKDIFTKHAEENQ
SLIYIAFSSELSGTYQSAKMMELEVKETYPDADIYVIDSKCASFGHGLVVLEAAKLANNGATVNEIIEKVDYHAKHMEHI
FTVDDLEYLYRGGRVSKTAAFVGGLLKIKPLLHVEDGKLIPLEKIRGSKKVLQRMVDVMESRGQDFENQTIGISHGDDLS
RAEQLSEMIQEKFNVAKENIIIEMVGSAIGSHSGPGTLALFFLNTNK
>Mature_286_residues
AITILTDSACDLSKKYYNENNIEMIPLTVHLDNEEFEDGRTINPKTVYEAMRNGKSPKTSQASAQDFKDIFTKHAEENQS
LIYIAFSSELSGTYQSAKMMELEVKETYPDADIYVIDSKCASFGHGLVVLEAAKLANNGATVNEIIEKVDYHAKHMEHIF
TVDDLEYLYRGGRVSKTAAFVGGLLKIKPLLHVEDGKLIPLEKIRGSKKVLQRMVDVMESRGQDFENQTIGISHGDDLSR
AEQLSEMIQEKFNVAKENIIIEMVGSAIGSHSGPGTLALFFLNTNK

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 32003; Mature: 31872

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAITILTDSACDLSKKYYNENNIEMIPLTVHLDNEEFEDGRTINPKTVYEAMRNGKSPKT
CEEEEEECCCHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCC
SQASAQDFKDIFTKHAEENQSLIYIAFSSELSGTYQSAKMMELEVKETYPDADIYVIDSK
CCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHCCCEEEEEEHHCCCCCCEEEEECC
CASFGHGLVVLEAAKLANNGATVNEIIEKVDYHAKHMEHIFTVDDLEYLYRGGRVSKTAA
HHHCCCCEEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHH
FVGGLLKIKPLLHVEDGKLIPLEKIRGSKKVLQRMVDVMESRGQDFENQTIGISHGDDLS
HHHHHHEECEEEEECCCCEECHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHH
RAEQLSEMIQEKFNVAKENIIIEMVGSAIGSHSGPGTLALFFLNTNK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCC
>Mature Secondary Structure 
AITILTDSACDLSKKYYNENNIEMIPLTVHLDNEEFEDGRTINPKTVYEAMRNGKSPKT
EEEEEECCCHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCC
SQASAQDFKDIFTKHAEENQSLIYIAFSSELSGTYQSAKMMELEVKETYPDADIYVIDSK
CCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHCCCEEEEEEHHCCCCCCEEEEECC
CASFGHGLVVLEAAKLANNGATVNEIIEKVDYHAKHMEHIFTVDDLEYLYRGGRVSKTAA
HHHCCCCEEEEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHH
FVGGLLKIKPLLHVEDGKLIPLEKIRGSKKVLQRMVDVMESRGQDFENQTIGISHGDDLS
HHHHHHEECEEEEECCCCEECHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHH
RAEQLSEMIQEKFNVAKENIIIEMVGSAIGSHSGPGTLALFFLNTNK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9025291; 9353931; 9384377 [H]