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The map label for this gene is liaF [H]

Identifier: 23098615

GI number: 23098615

Start: 1210124

End: 1210927

Strand: Direct

Name: liaF [H]

Synonym: OB1160

Alternate gene names: 23098615

Gene position: 1210124-1210927 (Clockwise)

Preceding gene: 23098614

Following gene: 23098616

Centisome position: 33.33

GC content: 33.96

Gene sequence:

>804_bases
ATGCATTACAAATTATACTTAAAATCACGAACATCGTTTTCTACTAGGATTAGGAGAGGAGAACAAGTAATGCGTTTTTT
AAAGTTTCTATTCGCAATGGTTTTAATCGCGTTTGGAATATTGCTTGTATTGAACAACGTAGGACTATATGATATTAAAA
TTAGTAATGCATGGGGATATATGTATCCTTTATTCTTTATTGTCTATGGTCTTGTTAGCTTGTGGAAATATTTAAGGAAA
AAAGGTGGAGGCTGGATGTTTTCATCATTCCTTATTATTTTCGGAACATTGCTTTTACTTGATAGATTTCAATATATTTC
GTTTGGTTTTTGGGATGTTTTCCAATTATGGCCATTGTTTATCGTCTATCTCGGAGTATCCATTATAAATACGAGGCAGG
GAGGGTGGAATCAGTATTTAGGGGGAGCAACATATACGAAAGGTAGTTCTCACTTTTCTATAGGAGATTATCAACAAAAA
CAGGAGTGGAATTTGGAGCCTTTAAATCTAAGGAATTTAGCTGGCGATTTTTATTTGGATTTGACGAAAGCATATATTCC
CGATAAAACAACGCCAATTGCTATTCGTTCTTTAGCAGGGGATGTGACGGTATTACTACCAGAGCACATTGATTTCCGAG
TCGATGCCGCTATCAATGCAGGAGAAATTATCGTATTAAATGATATAGCTGATGGAATCAATAGAAATATAAGTTATGAA
TCAGAAAATTATCCAAATGCGAGTAAAAAAGTAGACTTGTTTATTCGTTTAAAAGCAGGATCTATACGTGTGGAAAGAAT
ATAA

Upstream 100 bases:

>100_bases
GCTTCTTGTTATTAATGGGAAGTATTTATATCGATAAGAAATTTGAGTATTCTCCTACTAGAGACGGAGAAAAAAGCAAT
CCTTAGAAGGTTTATATATC

Downstream 100 bases:

>100_bases
GGGGGATCCAGATGCATAATCGATTAAAAGGAATTCGATTCATATTTATTCGTTCCCATATTTTTGTACTATTCCTTTCT
TCTGTTATCTTACTTTCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MHYKLYLKSRTSFSTRIRRGEQVMRFLKFLFAMVLIAFGILLVLNNVGLYDIKISNAWGYMYPLFFIVYGLVSLWKYLRK
KGGGWMFSSFLIIFGTLLLLDRFQYISFGFWDVFQLWPLFIVYLGVSIINTRQGGWNQYLGGATYTKGSSHFSIGDYQQK
QEWNLEPLNLRNLAGDFYLDLTKAYIPDKTTPIAIRSLAGDVTVLLPEHIDFRVDAAINAGEIIVLNDIADGINRNISYE
SENYPNASKKVDLFIRLKAGSIRVERI

Sequences:

>Translated_267_residues
MHYKLYLKSRTSFSTRIRRGEQVMRFLKFLFAMVLIAFGILLVLNNVGLYDIKISNAWGYMYPLFFIVYGLVSLWKYLRK
KGGGWMFSSFLIIFGTLLLLDRFQYISFGFWDVFQLWPLFIVYLGVSIINTRQGGWNQYLGGATYTKGSSHFSIGDYQQK
QEWNLEPLNLRNLAGDFYLDLTKAYIPDKTTPIAIRSLAGDVTVLLPEHIDFRVDAAINAGEIIVLNDIADGINRNISYE
SENYPNASKKVDLFIRLKAGSIRVERI
>Mature_267_residues
MHYKLYLKSRTSFSTRIRRGEQVMRFLKFLFAMVLIAFGILLVLNNVGLYDIKISNAWGYMYPLFFIVYGLVSLWKYLRK
KGGGWMFSSFLIIFGTLLLLDRFQYISFGFWDVFQLWPLFIVYLGVSIINTRQGGWNQYLGGATYTKGSSHFSIGDYQQK
QEWNLEPLNLRNLAGDFYLDLTKAYIPDKTTPIAIRSLAGDVTVLLPEHIDFRVDAAINAGEIIVLNDIADGINRNISYE
SENYPNASKKVDLFIRLKAGSIRVERI

Specific function: Unknown

COG id: COG4758

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016975 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30783; Mature: 30783

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHYKLYLKSRTSFSTRIRRGEQVMRFLKFLFAMVLIAFGILLVLNNVGLYDIKISNAWGY
CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCH
MYPLFFIVYGLVSLWKYLRKKGGGWMFSSFLIIFGTLLLLDRFQYISFGFWDVFQLWPLF
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
IVYLGVSIINTRQGGWNQYLGGATYTKGSSHFSIGDYQQKQEWNLEPLNLRNLAGDFYLD
HHHHHHHHEECCCCCCHHHCCCCEECCCCCCCCCCCCCHHHCCCCCCCCHHHCCCHHHEE
LTKAYIPDKTTPIAIRSLAGDVTVLLPEHIDFRVDAAINAGEIIVLNDIADGINRNISYE
HHHHHCCCCCCCHHHHHHCCCEEEEECCCCCEEEECCCCCCCEEEEECHHHHHCCCCCCC
SENYPNASKKVDLFIRLKAGSIRVERI
CCCCCCCCCEEEEEEEEECCCEEEECC
>Mature Secondary Structure
MHYKLYLKSRTSFSTRIRRGEQVMRFLKFLFAMVLIAFGILLVLNNVGLYDIKISNAWGY
CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCH
MYPLFFIVYGLVSLWKYLRKKGGGWMFSSFLIIFGTLLLLDRFQYISFGFWDVFQLWPLF
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
IVYLGVSIINTRQGGWNQYLGGATYTKGSSHFSIGDYQQKQEWNLEPLNLRNLAGDFYLD
HHHHHHHHEECCCCCCHHHCCCCEECCCCCCCCCCCCCHHHCCCCCCCCHHHCCCHHHEE
LTKAYIPDKTTPIAIRSLAGDVTVLLPEHIDFRVDAAINAGEIIVLNDIADGINRNISYE
HHHHHCCCCCCCHHHHHHCCCEEEEECCCCCEEEECCCCCCCEEEEECHHHHHCCCCCCC
SENYPNASKKVDLFIRLKAGSIRVERI
CCCCCCCCCEEEEEEEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377; 12207695 [H]