| Definition | Oceanobacillus iheyensis HTE831, complete genome. |
|---|---|
| Accession | NC_004193 |
| Length | 3,630,528 |
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The map label for this gene is yhaO [H]
Identifier: 23098599
GI number: 23098599
Start: 1194939
End: 1196147
Strand: Direct
Name: yhaO [H]
Synonym: OB1144
Alternate gene names: 23098599
Gene position: 1194939-1196147 (Clockwise)
Preceding gene: 23098598
Following gene: 23098600
Centisome position: 32.91
GC content: 31.84
Gene sequence:
>1209_bases ATGCCAGAGTCGATATCATTTATTCATGCGGCAGACCTACATTTAGATAGTCCCTTTAAAGGACTGCAGAATATACCTGA AGAAATTTTTCAAGAAATTCAAGAAAGTACATTTACGACATTAGATAATTTAATCGAACAGGCGATTATTCATAAAGTTG ACTTTTTATTATTAGTAGGGGATTTATATGATAACGATAATCAAAGCTTAAAAGCACAAGTGCGACTTAGAAATGCTTTT CAAAAGCTTAAAGAATATCATATTCAAGTATTCCTTTCCTATGGAAATCATGATTATTTGAATGAACGTTCCTTATCTGT ACAATTTCCTAGTAATGTTCATATGTTTACAAGTGAGAAGGTGTCTTACTTTCCATTTAATAAAAACAAAGAAACTTTAG CCCATATTTATGGATTTAGTTATGAAAGTAGAGCGGTTCATGACTCCAAGGTATTAGATTATCAAAGGAAAAATGAACAA ATACCCTATCATATTGGATTATTGCATGGAAGTATAACTACGAATACCGAACATGATATGTATGCACCGTTTCATATAGA AGAATTAAAAAATACCCACATGGATTATTGGGCACTTGGCCATATTCATAAAAGAGAAGTACTATCTGACGCTCCACCAA TTATCTACCCAGGAAATATACAAGGTCGTCATCGGAAGGAAATAGGTGAAAAAGGATGCTTTTTCGTTGAAATGAACGAG TTTGAAGTTCAAAAACAATTTATACCATTAGAATCAATACGGTTCGAACAAGTAGAATTAGATTTGTCTGGAGTTGAATT TCTACATAATATCGAATCACTTGTTTTACAATCCCTTCCTCAATTAAAGAATCCAGGATTAATTGAATTAATTATAAAGT TGAGTGAACAACAATACGAAAGCTGGGAACGATCACGCATTGAAGAGTGGATAGATATAATAAATGAAATAACTATCACT CAATCTCCATGGATTTATATATATCGTACCTCGATTCAAATTCCGAAACGTCTTGAATTTGAAGAAAATAGTCCCTTCTT TGCGATGATAAACAAACAAATAGAAGAAGTACCTATTCAACCAATTGTAGATGAATTATATCAAAACAAACAAGCTAGAA AATATATTAATACGTTATCAGAATCAGAGATAGAAGAAATAAAGCAAGAAGCAGATCAATTCTTACAAGACGTATTTCGG AGAGGATGA
Upstream 100 bases:
>100_bases CTATAAAATGTTTAAGGGGTATTTCATTGCGGTATAAACAGAACGTGCATTCTGTTTTACTGTTTGGTAGAATAAGTTGT AAGGGGAGGAGTGGAGTAAA
Downstream 100 bases:
>100_bases GATTATGCGAATTACGGATATTATTATCTATGGGTTTGGACAATGGGTTGATCAACAATTCACCTTCTCATCTTCTAAAA TCACAACAATCTATGGGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MPESISFIHAADLHLDSPFKGLQNIPEEIFQEIQESTFTTLDNLIEQAIIHKVDFLLLVGDLYDNDNQSLKAQVRLRNAF QKLKEYHIQVFLSYGNHDYLNERSLSVQFPSNVHMFTSEKVSYFPFNKNKETLAHIYGFSYESRAVHDSKVLDYQRKNEQ IPYHIGLLHGSITTNTEHDMYAPFHIEELKNTHMDYWALGHIHKREVLSDAPPIIYPGNIQGRHRKEIGEKGCFFVEMNE FEVQKQFIPLESIRFEQVELDLSGVEFLHNIESLVLQSLPQLKNPGLIELIIKLSEQQYESWERSRIEEWIDIINEITIT QSPWIYIYRTSIQIPKRLEFEENSPFFAMINKQIEEVPIQPIVDELYQNKQARKYINTLSESEIEEIKQEADQFLQDVFR RG
Sequences:
>Translated_402_residues MPESISFIHAADLHLDSPFKGLQNIPEEIFQEIQESTFTTLDNLIEQAIIHKVDFLLLVGDLYDNDNQSLKAQVRLRNAF QKLKEYHIQVFLSYGNHDYLNERSLSVQFPSNVHMFTSEKVSYFPFNKNKETLAHIYGFSYESRAVHDSKVLDYQRKNEQ IPYHIGLLHGSITTNTEHDMYAPFHIEELKNTHMDYWALGHIHKREVLSDAPPIIYPGNIQGRHRKEIGEKGCFFVEMNE FEVQKQFIPLESIRFEQVELDLSGVEFLHNIESLVLQSLPQLKNPGLIELIIKLSEQQYESWERSRIEEWIDIINEITIT QSPWIYIYRTSIQIPKRLEFEENSPFFAMINKQIEEVPIQPIVDELYQNKQARKYINTLSESEIEEIKQEADQFLQDVFR RG >Mature_401_residues PESISFIHAADLHLDSPFKGLQNIPEEIFQEIQESTFTTLDNLIEQAIIHKVDFLLLVGDLYDNDNQSLKAQVRLRNAFQ KLKEYHIQVFLSYGNHDYLNERSLSVQFPSNVHMFTSEKVSYFPFNKNKETLAHIYGFSYESRAVHDSKVLDYQRKNEQI PYHIGLLHGSITTNTEHDMYAPFHIEELKNTHMDYWALGHIHKREVLSDAPPIIYPGNIQGRHRKEIGEKGCFFVEMNEF EVQKQFIPLESIRFEQVELDLSGVEFLHNIESLVLQSLPQLKNPGLIELIIKLSEQQYESWERSRIEEWIDIINEITITQ SPWIYIYRTSIQIPKRLEFEENSPFFAMINKQIEEVPIQPIVDELYQNKQARKYINTLSESEIEEIKQEADQFLQDVFRR G
Specific function: Unknown
COG id: COG0420
COG function: function code L; DNA repair exonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallophosphoesterase superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 - InterPro: IPR014576 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 47408; Mature: 47277
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPESISFIHAADLHLDSPFKGLQNIPEEIFQEIQESTFTTLDNLIEQAIIHKVDFLLLVG CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE DLYDNDNQSLKAQVRLRNAFQKLKEYHIQVFLSYGNHDYLNERSLSVQFPSNVHMFTSEK HHCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCEEEECCCCEEEEECCC VSYFPFNKNKETLAHIYGFSYESRAVHDSKVLDYQRKNEQIPYHIGLLHGSITTNTEHDM EEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCEECCCCCCC YAPFHIEELKNTHMDYWALGHIHKREVLSDAPPIIYPGNIQGRHRKEIGEKGCFFVEMNE CCCEEHHHHHCCCCCHHHHCCHHHHHHHCCCCCEEECCCCCCCHHHHHCCCCEEEEEECH FEVQKQFIPLESIRFEQVELDLSGVEFLHNIESLVLQSLPQLKNPGLIELIIKLSEQQYE HHHHHHHCCHHHCCEEHEEECHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH SWERSRIEEWIDIINEITITQSPWIYIYRTSIQIPKRLEFEENSPFFAMINKQIEEVPIQ HHHHHHHHHHHHHHHHHEECCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCH PIVDELYQNKQARKYINTLSESEIEEIKQEADQFLQDVFRRG HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PESISFIHAADLHLDSPFKGLQNIPEEIFQEIQESTFTTLDNLIEQAIIHKVDFLLLVG CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE DLYDNDNQSLKAQVRLRNAFQKLKEYHIQVFLSYGNHDYLNERSLSVQFPSNVHMFTSEK HHCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCEEEECCCCEEEEECCC VSYFPFNKNKETLAHIYGFSYESRAVHDSKVLDYQRKNEQIPYHIGLLHGSITTNTEHDM EEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCEECCCCCCC YAPFHIEELKNTHMDYWALGHIHKREVLSDAPPIIYPGNIQGRHRKEIGEKGCFFVEMNE CCCEEHHHHHCCCCCHHHHCCHHHHHHHCCCCCEEECCCCCCCHHHHHCCCCEEEEEECH FEVQKQFIPLESIRFEQVELDLSGVEFLHNIESLVLQSLPQLKNPGLIELIIKLSEQQYE HHHHHHHCCHHHCCEEHEEECHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH SWERSRIEEWIDIINEITITQSPWIYIYRTSIQIPKRLEFEENSPFFAMINKQIEEVPIQ HHHHHHHHHHHHHHHHHEECCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCH PIVDELYQNKQARKYINTLSESEIEEIKQEADQFLQDVFRRG HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]