| Definition | Oceanobacillus iheyensis HTE831, complete genome. |
|---|---|
| Accession | NC_004193 |
| Length | 3,630,528 |
Click here to switch to the map view.
The map label for this gene is wxcX [H]
Identifier: 23098585
GI number: 23098585
Start: 1181161
End: 1182756
Strand: Direct
Name: wxcX [H]
Synonym: OB1130
Alternate gene names: 23098585
Gene position: 1181161-1182756 (Clockwise)
Preceding gene: 23098581
Following gene: 23098587
Centisome position: 32.53
GC content: 33.77
Gene sequence:
>1596_bases ATGGTTTCACAGAATTTAATAAAAGACTATTTTACGTATGAGTTTTGGGTGAAAGCTGAGAAAAGTACCAGTAAAAACAC TCGTTTTTTGATTTTACCGAAGAATATAAATCGAGCAACGGATTTAACTGGAATTGGTATAGCAGTAAGTTTCAATAATA TACAAGTCCTGGAAACAGGTGCAAAATTTAGCCCAATCATTGAAGTACATCGTGATTTAAACTATTGGACTCATATCGCT GTTGTCTATCAAAACAAAGAAATTTATCTATATATTAATAGCAACTTAGTAAAGCGTATAGTAAGTAAAAAAGAGTTAGT TCTCTTCGTACCTCAAAGTGTGAATAGAAATAATTTTGCGGGAAGTATCCGTGGGTTACGAATATGGAGTTATTCACGTA ATGCGAGTGAAATCAAATCGTTTATGAATCAGCTATTGCCATCGGATGAAAAAGGATTGGTATTTAATTATCATGGTGAT ATTAGAAATAGGGTAATTACGAAAACAAGAAATACCATCAAGAAGAAAAACAACAAAAAAGATACAAAGATAATCGCCTT ATATTTACCGCAATTTCATGAAATAAAAGAAAATAACAATTGGTGGGGGAAAGGTTTTACAGAATGGTCAAATACAAAAA AAGCCAAACCATTATTTCACAATCACTACCAACCTCGAGAACCCTACAGAGACTTTTATTATGACCTTACTAATCCAGGT GTAAGAGCGTGGCAAGCAAAACTTGCCAAACAGTATGGAATTTTTGGCTTCTGTTATTATCATTATTGGTTTAAAGGTAG AAGGTTGTTAGAAAGGCCATTTAATGAAGTGTTAGCTAGTGGTAAGCCAGATTTTCCATTTTGTTTGTCTTGGGCTAATG AGCCATGGACTCGGAACTGGAATGGAGGATCTAGAAATGTTTTGATGCCTGAGGATTATGGAGAAAAAAGAGATTGGAAA GAGCATTTTAACTATCTTATCAAGGCATTTAAAGACAAAAGGTATATTCGAGTGAATAACAAACCATTATTCGTTATATA TCGTCCTGAAACAATACCGAATTTAATTGATATGATGGATTATTGGGAGGAACTTGCGATACAACATGGATTAGAAGGAA TTTACTTTGTTCAAACGTTTAACGGTTTTCGACCACTATCACCAATAAATAGATTCGATGCTGCCGTAGAGTTTGAGCCA CACTTTACGCTAGCACATGGAAAAGACAATAATTTTTGGAAATTGGTTAATGGTTATAATGGTAAAGCAAAATATTTAGA TTACGATCGTATTTGGGAAAGTATTTTAAGCAGAAATAATAAACAGCACAAGAAAGTATTTTTAGGAGCATTCACCGATT GGGATAATACTGCCCGAATGCAGTCATCTGGAACCATATATCACGGTGCAACACCAGCAAAGTTCAAAAATTATTTAAGT CGTCAAATTGATAGAGCAAATAATGTCTACGATAGTGAATTTTTATTTATTAATGCATGGAATGAGTGGGCAGAAGGTGC TTATCTCGAGCCAGATAAAAAATTCAAATATGGCTATTTAGAAGCTGTAAGAGACGCTTTAAAGATGAATCGCTAA
Upstream 100 bases:
>100_bases CGTTCTTGCCTAAATTACTTGAAATTAGTCTGAGACCTATTCGTATCTGCTTGGTTAGTAATACAATATAGTACTTGTGT AATGGTTAAGGAGGCTAATC
Downstream 100 bases:
>100_bases GCGTAGATTAAAAAGAAGAGCAGATATTATATGTAAAAAGCTTAAGGGAACATATTTTATCTGCTTGTTTTTCTATGATT TATATAATTGGATTTGAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 531; Mature: 531
Protein sequence:
>531_residues MVSQNLIKDYFTYEFWVKAEKSTSKNTRFLILPKNINRATDLTGIGIAVSFNNIQVLETGAKFSPIIEVHRDLNYWTHIA VVYQNKEIYLYINSNLVKRIVSKKELVLFVPQSVNRNNFAGSIRGLRIWSYSRNASEIKSFMNQLLPSDEKGLVFNYHGD IRNRVITKTRNTIKKKNNKKDTKIIALYLPQFHEIKENNNWWGKGFTEWSNTKKAKPLFHNHYQPREPYRDFYYDLTNPG VRAWQAKLAKQYGIFGFCYYHYWFKGRRLLERPFNEVLASGKPDFPFCLSWANEPWTRNWNGGSRNVLMPEDYGEKRDWK EHFNYLIKAFKDKRYIRVNNKPLFVIYRPETIPNLIDMMDYWEELAIQHGLEGIYFVQTFNGFRPLSPINRFDAAVEFEP HFTLAHGKDNNFWKLVNGYNGKAKYLDYDRIWESILSRNNKQHKKVFLGAFTDWDNTARMQSSGTIYHGATPAKFKNYLS RQIDRANNVYDSEFLFINAWNEWAEGAYLEPDKKFKYGYLEAVRDALKMNR
Sequences:
>Translated_531_residues MVSQNLIKDYFTYEFWVKAEKSTSKNTRFLILPKNINRATDLTGIGIAVSFNNIQVLETGAKFSPIIEVHRDLNYWTHIA VVYQNKEIYLYINSNLVKRIVSKKELVLFVPQSVNRNNFAGSIRGLRIWSYSRNASEIKSFMNQLLPSDEKGLVFNYHGD IRNRVITKTRNTIKKKNNKKDTKIIALYLPQFHEIKENNNWWGKGFTEWSNTKKAKPLFHNHYQPREPYRDFYYDLTNPG VRAWQAKLAKQYGIFGFCYYHYWFKGRRLLERPFNEVLASGKPDFPFCLSWANEPWTRNWNGGSRNVLMPEDYGEKRDWK EHFNYLIKAFKDKRYIRVNNKPLFVIYRPETIPNLIDMMDYWEELAIQHGLEGIYFVQTFNGFRPLSPINRFDAAVEFEP HFTLAHGKDNNFWKLVNGYNGKAKYLDYDRIWESILSRNNKQHKKVFLGAFTDWDNTARMQSSGTIYHGATPAKFKNYLS RQIDRANNVYDSEFLFINAWNEWAEGAYLEPDKKFKYGYLEAVRDALKMNR >Mature_531_residues MVSQNLIKDYFTYEFWVKAEKSTSKNTRFLILPKNINRATDLTGIGIAVSFNNIQVLETGAKFSPIIEVHRDLNYWTHIA VVYQNKEIYLYINSNLVKRIVSKKELVLFVPQSVNRNNFAGSIRGLRIWSYSRNASEIKSFMNQLLPSDEKGLVFNYHGD IRNRVITKTRNTIKKKNNKKDTKIIALYLPQFHEIKENNNWWGKGFTEWSNTKKAKPLFHNHYQPREPYRDFYYDLTNPG VRAWQAKLAKQYGIFGFCYYHYWFKGRRLLERPFNEVLASGKPDFPFCLSWANEPWTRNWNGGSRNVLMPEDYGEKRDWK EHFNYLIKAFKDKRYIRVNNKPLFVIYRPETIPNLIDMMDYWEELAIQHGLEGIYFVQTFNGFRPLSPINRFDAAVEFEP HFTLAHGKDNNFWKLVNGYNGKAKYLDYDRIWESILSRNNKQHKKVFLGAFTDWDNTARMQSSGTIYHGATPAKFKNYLS RQIDRANNVYDSEFLFINAWNEWAEGAYLEPDKKFKYGYLEAVRDALKMNR
Specific function: Unknown
COG id: COG3754
COG function: function code M; Lipopolysaccharide biosynthesis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007739 [H]
Pfam domain/function: PF05045 RgpF [H]
EC number: NA
Molecular weight: Translated: 63040; Mature: 63040
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSQNLIKDYFTYEFWVKAEKSTSKNTRFLILPKNINRATDLTGIGIAVSFNNIQVLETG CCCHHHHHHHHEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCEEEEECC AKFSPIIEVHRDLNYWTHIAVVYQNKEIYLYINSNLVKRIVSKKELVLFVPQSVNRNNFA CCCCHHHHHHHCCCCEEEEEEEEECCEEEEEECCHHHHHHHCCCCEEEECCCCCCCCCCC GSIRGLRIWSYSRNASEIKSFMNQLLPSDEKGLVFNYHGDIRNRVITKTRNTIKKKNNKK CCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCC DTKIIALYLPQFHEIKENNNWWGKGFTEWSNTKKAKPLFHNHYQPREPYRDFYYDLTNPG CEEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHEECCCCC VRAWQAKLAKQYGIFGFCYYHYWFKGRRLLERPFNEVLASGKPDFPFCLSWANEPWTRNW HHHHHHHHHHHHCCEEEEEHHHHHHCCHHHHCCHHHHHHCCCCCCCEEEECCCCCCCCCC NGGSRNVLMPEDYGEKRDWKEHFNYLIKAFKDKRYIRVNNKPLFVIYRPETIPNLIDMMD CCCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCEEEEEECCCCCHHHHHHHH YWEELAIQHGLEGIYFVQTFNGFRPLSPINRFDAAVEFEPHFTLAHGKDNNFWKLVNGYN HHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHCCEEEECCCEEEEECCCCCEEEEEECCC GKAKYLDYDRIWESILSRNNKQHKKVFLGAFTDWDNTARMQSSGTIYHGATPAKFKNYLS CCEEECCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCEECCCCCEEECCCHHHHHHHHH RQIDRANNVYDSEFLFINAWNEWAEGAYLEPDKKFKYGYLEAVRDALKMNR HHHHHHCCCCCCEEEEEECCCHHCCCCCCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MVSQNLIKDYFTYEFWVKAEKSTSKNTRFLILPKNINRATDLTGIGIAVSFNNIQVLETG CCCHHHHHHHHEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCEEEEECC AKFSPIIEVHRDLNYWTHIAVVYQNKEIYLYINSNLVKRIVSKKELVLFVPQSVNRNNFA CCCCHHHHHHHCCCCEEEEEEEEECCEEEEEECCHHHHHHHCCCCEEEECCCCCCCCCCC GSIRGLRIWSYSRNASEIKSFMNQLLPSDEKGLVFNYHGDIRNRVITKTRNTIKKKNNKK CCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCC DTKIIALYLPQFHEIKENNNWWGKGFTEWSNTKKAKPLFHNHYQPREPYRDFYYDLTNPG CEEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHEECCCCC VRAWQAKLAKQYGIFGFCYYHYWFKGRRLLERPFNEVLASGKPDFPFCLSWANEPWTRNW HHHHHHHHHHHHCCEEEEEHHHHHHCCHHHHCCHHHHHHCCCCCCCEEEECCCCCCCCCC NGGSRNVLMPEDYGEKRDWKEHFNYLIKAFKDKRYIRVNNKPLFVIYRPETIPNLIDMMD CCCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCEEEEEECCCCCHHHHHHHH YWEELAIQHGLEGIYFVQTFNGFRPLSPINRFDAAVEFEPHFTLAHGKDNNFWKLVNGYN HHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHCCEEEECCCEEEEECCCCCEEEEEECCC GKAKYLDYDRIWESILSRNNKQHKKVFLGAFTDWDNTARMQSSGTIYHGATPAKFKNYLS CCEEECCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCEECCCCCEEECCCHHHHHHHHH RQIDRANNVYDSEFLFINAWNEWAEGAYLEPDKKFKYGYLEAVRDALKMNR HHHHHHCCCCCCEEEEEECCCHHCCCCCCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9385134 [H]