Click here to switch to the map view.

The map label for this gene is yhcN [H]

Identifier: 23098560

GI number: 23098560

Start: 1159137

End: 1159703

Strand: Direct

Name: yhcN [H]

Synonym: OB1105

Alternate gene names: 23098560

Gene position: 1159137-1159703 (Clockwise)

Preceding gene: 23098558

Following gene: 23098561

Centisome position: 31.93

GC content: 32.63

Gene sequence:

>567_bases
ATGAAATTACGTATATTTGCGATTATGGCTTTACTATTTGTGCTTGTAGCTTGTCAGAATGCAGAAGAAAATTCAATGGA
TAATAATAATATGGGTGAAGGCAATGTGGAACCTACTCGCTATGACAACAACTCTAATTTAGGACAAGAAATGTCTGATA
AAAACAATTCCATGCAGCGAGATGCAGATCAAAATCAAAATACTAAGTACGATGTATCAGAAGAAGCTGCTAAAAAAATA
GCAGAAAAAGTAGAAGGAATTGAAGATGCATATGTATTAACTACCGATAACAATGCATATGTTGGAGCACATTTAAATCA
AGAAAATAATAACAATGGAAACAATAGTCAATCTGGAGACAATGTATCTGATGAAATGAAAGAACAAATAGCAAATATTG
TTCGTTCGGTTGATAATTCCATTGAAAATGTTTATGTTACTACAAATCCTGATTTTATGGATTTAACGGATCGATATATG
AATGATGTAGATGAAGGTCGTCCTGTTGAAGGATTCTTCGATCAAATAGGAAATATGATTGAACGCGTTTTCCCGAATAA
CCGATAA

Upstream 100 bases:

>100_bases
TACATTAATGGTGTGTCTGCCAAAAAAAGGTGACATAAATGTGCATAAAAAGAAAATATCAATACAAAATAAAGGCAAAT
AAGGTAAGGAGGAAAAAGTT

Downstream 100 bases:

>100_bases
ATTTATAATGAAAGTCCGTAACTGTCAAGATGAGGCCCAATCCGGTCAAACTCTTGACAGTTTTTTATTTGAGTTAATTT
CATAACTAGTGATTCATTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MKLRIFAIMALLFVLVACQNAEENSMDNNNMGEGNVEPTRYDNNSNLGQEMSDKNNSMQRDADQNQNTKYDVSEEAAKKI
AEKVEGIEDAYVLTTDNNAYVGAHLNQENNNNGNNSQSGDNVSDEMKEQIANIVRSVDNSIENVYVTTNPDFMDLTDRYM
NDVDEGRPVEGFFDQIGNMIERVFPNNR

Sequences:

>Translated_188_residues
MKLRIFAIMALLFVLVACQNAEENSMDNNNMGEGNVEPTRYDNNSNLGQEMSDKNNSMQRDADQNQNTKYDVSEEAAKKI
AEKVEGIEDAYVLTTDNNAYVGAHLNQENNNNGNNSQSGDNVSDEMKEQIANIVRSVDNSIENVYVTTNPDFMDLTDRYM
NDVDEGRPVEGFFDQIGNMIERVFPNNR
>Mature_188_residues
MKLRIFAIMALLFVLVACQNAEENSMDNNNMGEGNVEPTRYDNNSNLGQEMSDKNNSMQRDADQNQNTKYDVSEEAAKKI
AEKVEGIEDAYVLTTDNNAYVGAHLNQENNNNGNNSQSGDNVSDEMKEQIANIVRSVDNSIENVYVTTNPDFMDLTDRYM
NDVDEGRPVEGFFDQIGNMIERVFPNNR

Specific function: Plays a role, either directly or indirectly, in spore outgrowth [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Forespore inner membrane; Lipid-anchor (Probable). Note=Expressed in the forespore. Attached to the inner spore membrane by a lipid anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014247
- InterPro:   IPR019076 [H]

Pfam domain/function: PF09580 Spore_YhcN_YlaJ [H]

EC number: NA

Molecular weight: Translated: 21222; Mature: 21222

Theoretical pI: Translated: 3.96; Mature: 3.96

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLRIFAIMALLFVLVACQNAEENSMDNNNMGEGNVEPTRYDNNSNLGQEMSDKNNSMQR
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHH
DADQNQNTKYDVSEEAAKKIAEKVEGIEDAYVLTTDNNAYVGAHLNQENNNNGNNSQSGD
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCCC
NVSDEMKEQIANIVRSVDNSIENVYVTTNPDFMDLTDRYMNDVDEGRPVEGFFDQIGNMI
CHHHHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
ERVFPNNR
HHHCCCCC
>Mature Secondary Structure
MKLRIFAIMALLFVLVACQNAEENSMDNNNMGEGNVEPTRYDNNSNLGQEMSDKNNSMQR
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHH
DADQNQNTKYDVSEEAAKKIAEKVEGIEDAYVLTTDNNAYVGAHLNQENNNNGNNSQSGD
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCCC
NVSDEMKEQIANIVRSVDNSIENVYVTTNPDFMDLTDRYMNDVDEGRPVEGFFDQIGNMI
CHHHHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
ERVFPNNR
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377; 9611260 [H]