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The map label for this gene is 23098549

Identifier: 23098549

GI number: 23098549

Start: 1145525

End: 1146655

Strand: Reverse

Name: 23098549

Synonym: OB1094

Alternate gene names: NA

Gene position: 1146655-1145525 (Counterclockwise)

Preceding gene: 23098550

Following gene: 28563918

Centisome position: 31.58

GC content: 34.84

Gene sequence:

>1131_bases
GTGAAAAGATTACTGCTTACTTTAATAATCTGTGTTGTATTTTTGACCTCTTGTCTTCCTCCAGCACAGGAGTTAGAAAG
TTTAGCTGTTGTTAATACGCGTGGAGTAGATCGGTTAGATAATGGTGATATTGAGACCACATTGCTTGTATATCGTTTTG
ATCAGCAATCTCCTCAAAATTATGCTGCTGTGTCAGGTGTAGGTAAAACATTGAAAGGAGCTAGAGAAACAGCATCAAAT
AATATCAACTTCAGGGCTAGTCCTGGACAAATAAACACAGAAGTATATGGATATGAAACCGCGGAGCATGGAATACTTCA
TTTTATGAATGGACTTGTTCGTGATGCAAAAGTATCAGATACAATGAATCTTGCGATTAGTACCGAAACAGCAAAGGATG
TTCTCGATGAAAATATATCGACTAATTTAGATATTGGAAATTTCCTCGAAAGCCTCATTAACCAAGAAGTAGATGAAGGA
AGACTCCCGAATGCTTCATTATATACTTTTTCAAGCACTTATGGGACAACTGGTCATGATCCGGTATTACCATTACTTGA
AACAAAGAACGGACGTCCGAATCTAATTGGAATTGGATACTTTCAAAAGGACAGACTCGTCGACTCGGGAGGAATGACGG
AAGCAACCATATTAAATATAACTAAGGAGGATATCAAAAACACTCCACTTGAAATCACAGTCCCTGTTGAACCATTTGTT
GAATCCATCTATCATCCAGATGGTTCAGATTTGAGTGAACTCACTGTAGAATTAACAATAGTCAAAGGGAAAAGTAAGAC
GAAGGTTATTGATTTAAATCAACCACATTTTGAAGTAAATACGAAAATACGAGCGGATATCAATGAAACTTCAATCATAT
TGGCATTTACTAATGAAAAAATTTTACATCGTTTAGAAAATGAATTAGAGAAAAAAATAAATTCCATCTTTAACCAAATA
TTAGAGAAATCAAAAGAAAATTTAATCGATCCCATAGGGTTTGGTCGATATTATAGAATCAATCGTCCAAGTGGAAAACT
TACTGATGAAGAATGGAAGGAAATTTTACCAGATATAAAGGTGGATTTTAATACGAATATCGATATCGAAAATTACGGGA
CAATAATGTAA

Upstream 100 bases:

>100_bases
CTCAAGTAGGCTTTTGGCTAATATTTGTTTATCCACTGGTTTTATTACCATTCGTACTCGTAAAATCACATTGGAGAAAG
AAAAACAAGGGGATGAAAAC

Downstream 100 bases:

>100_bases
TTGTAATAGTTATAGCTAAAATTCTAAATGAATGAAGAATTAGTAAATAGCAAGAGACTAAACGTACCCTTTCCGCCAGT
TAATCCATTAGAAAATATTA

Product: spore germination protein

Products: NA

Alternate protein names: Germination Protein Ger(X)C Family; Spore Germination B3 GerAC Family Protein; Spore Germination Protein GerHC; GerC Family Spore Germination Protein; Spore Germination Protein GerA; Spore Germination Protein QC; Spore Germination Protein C; Spore Germination Protein GerAC; Spore Germination Protein GerKC Membrane Protein

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MKRLLLTLIICVVFLTSCLPPAQELESLAVVNTRGVDRLDNGDIETTLLVYRFDQQSPQNYAAVSGVGKTLKGARETASN
NINFRASPGQINTEVYGYETAEHGILHFMNGLVRDAKVSDTMNLAISTETAKDVLDENISTNLDIGNFLESLINQEVDEG
RLPNASLYTFSSTYGTTGHDPVLPLLETKNGRPNLIGIGYFQKDRLVDSGGMTEATILNITKEDIKNTPLEITVPVEPFV
ESIYHPDGSDLSELTVELTIVKGKSKTKVIDLNQPHFEVNTKIRADINETSIILAFTNEKILHRLENELEKKINSIFNQI
LEKSKENLIDPIGFGRYYRINRPSGKLTDEEWKEILPDIKVDFNTNIDIENYGTIM

Sequences:

>Translated_376_residues
MKRLLLTLIICVVFLTSCLPPAQELESLAVVNTRGVDRLDNGDIETTLLVYRFDQQSPQNYAAVSGVGKTLKGARETASN
NINFRASPGQINTEVYGYETAEHGILHFMNGLVRDAKVSDTMNLAISTETAKDVLDENISTNLDIGNFLESLINQEVDEG
RLPNASLYTFSSTYGTTGHDPVLPLLETKNGRPNLIGIGYFQKDRLVDSGGMTEATILNITKEDIKNTPLEITVPVEPFV
ESIYHPDGSDLSELTVELTIVKGKSKTKVIDLNQPHFEVNTKIRADINETSIILAFTNEKILHRLENELEKKINSIFNQI
LEKSKENLIDPIGFGRYYRINRPSGKLTDEEWKEILPDIKVDFNTNIDIENYGTIM
>Mature_376_residues
MKRLLLTLIICVVFLTSCLPPAQELESLAVVNTRGVDRLDNGDIETTLLVYRFDQQSPQNYAAVSGVGKTLKGARETASN
NINFRASPGQINTEVYGYETAEHGILHFMNGLVRDAKVSDTMNLAISTETAKDVLDENISTNLDIGNFLESLINQEVDEG
RLPNASLYTFSSTYGTTGHDPVLPLLETKNGRPNLIGIGYFQKDRLVDSGGMTEATILNITKEDIKNTPLEITVPVEPFV
ESIYHPDGSDLSELTVELTIVKGKSKTKVIDLNQPHFEVNTKIRADINETSIILAFTNEKILHRLENELEKKINSIFNQI
LEKSKENLIDPIGFGRYYRINRPSGKLTDEEWKEILPDIKVDFNTNIDIENYGTIM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42023; Mature: 42023

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLLLTLIICVVFLTSCLPPAQELESLAVVNTRGVDRLDNGDIETTLLVYRFDQQSPQN
CHHHHHHHHHHHHHHHHCCCCHHHHHHEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCC
YAAVSGVGKTLKGARETASNNINFRASPGQINTEVYGYETAEHGILHFMNGLVRDAKVSD
HHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCC
TMNLAISTETAKDVLDENISTNLDIGNFLESLINQEVDEGRLPNASLYTFSSTYGTTGHD
CEEEEEECHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHCCCCCCCEEEEEECCCCCCCCC
PVLPLLETKNGRPNLIGIGYFQKDRLVDSGGMTEATILNITKEDIKNTPLEITVPVEPFV
CCCCCEECCCCCCCEEEEEEECCCCEECCCCCCEEEEEEEEHHHHCCCCEEEEECHHHHH
ESIYHPDGSDLSELTVELTIVKGKSKTKVIDLNQPHFEVNTKIRADINETSIILAFTNEK
HHHCCCCCCCHHHEEEEEEEEECCCCEEEEECCCCCEEECCEEEECCCCCEEEEEECCHH
ILHRLENELEKKINSIFNQILEKSKENLIDPIGFGRYYRINRPSGKLTDEEWKEILPDIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHCCCCE
VDFNTNIDIENYGTIM
EECCCCCCCCCCCCCC
>Mature Secondary Structure
MKRLLLTLIICVVFLTSCLPPAQELESLAVVNTRGVDRLDNGDIETTLLVYRFDQQSPQN
CHHHHHHHHHHHHHHHHCCCCHHHHHHEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCC
YAAVSGVGKTLKGARETASNNINFRASPGQINTEVYGYETAEHGILHFMNGLVRDAKVSD
HHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCC
TMNLAISTETAKDVLDENISTNLDIGNFLESLINQEVDEGRLPNASLYTFSSTYGTTGHD
CEEEEEECHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHCCCCCCCEEEEEECCCCCCCCC
PVLPLLETKNGRPNLIGIGYFQKDRLVDSGGMTEATILNITKEDIKNTPLEITVPVEPFV
CCCCCEECCCCCCCEEEEEEECCCCEECCCCCCEEEEEEEEHHHHCCCCEEEEECHHHHH
ESIYHPDGSDLSELTVELTIVKGKSKTKVIDLNQPHFEVNTKIRADINETSIILAFTNEK
HHHCCCCCCCHHHEEEEEEEEECCCCEEEEECCCCCEEECCEEEECCCCCEEEEEECCHH
ILHRLENELEKKINSIFNQILEKSKENLIDPIGFGRYYRINRPSGKLTDEEWKEILPDIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHCCCCE
VDFNTNIDIENYGTIM
EECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA