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The map label for this gene is yhbA [H]

Identifier: 23098540

GI number: 23098540

Start: 1133148

End: 1134284

Strand: Direct

Name: yhbA [H]

Synonym: OB1085

Alternate gene names: 23098540

Gene position: 1133148-1134284 (Clockwise)

Preceding gene: 23098539

Following gene: 23098541

Centisome position: 31.21

GC content: 37.73

Gene sequence:

>1137_bases
TTGCAAGTAGCTCAATTAAAGGAAGATATTCAATCTTATGCAAAGGAAATCGGCATTGATAAAATCGGTTTTACGACCGC
TGATGTTTTTACAGAATTAAAAGAACGATTACGCAGACAACAGGAACTACAATACCAATCTGGTTTTGAAAAAGGTTCTA
TAGAAGAAAGAACCGAACCTAAAAGGTTATTACCAGAAGCGAAATCCATTATTTCTATAGCAGTAGCATATCCACAAAAA
ATGCATGATGCCCCCCGAAGTACCAAAGAAGAGAGACGTGGTATTTTCGCGAGGGCTTCATGGGGAATTGATTATCATGT
AGCCTTACGCGAACGGTTAAATAAATTGTCAGAATATATCCAGACGAAATATCCTGATGCAGTTAACAAAATTATGGTTG
ATACAGGCGAGTTATCTGATCGGGCAGTTGCGGAGCGGTCGGGTATAGGGTTTAGTGGGAAAAATACGTCGATTATTACT
CCTGAATTTGGTTCATTTGTTTATTTAGGAGAAATGATTACAAACATTCCATTTATACCCGATAGTCCGGTCGAAGAAAG
CTGTGGTGATTGTACAATCTGTATGGATGCTTGTCCAACGGGGGCGTTAGTTCAAGGTGGACAATTAAATGCACAACGAT
GTATTGCTTTCTTAACCCAAACGAAAGATTTCCTACCGGATGAGTTTCGTTCAAAAATAGGTAATCGTATATACGGTTGT
GACACTTGTCAACAAGTATGTCCTTATAACAGAGGGATAGATTCTCATTTTCATCAAGAATTAGAGCCCGAACCAGAATC
TGCAAAACCGAAGTTAAAACCAATGCTACATCTGTCTAATAAAGAGTTTAAAGAAAAGTTTGGGTATATGTCTGGGTCTT
GGCGCGGTAAAAAACCTTTACAACGAAATGCATTAATTGCCATTGGACACTACAAAGATAAAAGTGCGATTGAGGATCTG
ATTAAAGTGATGAATAATGACCCAAGGCCAGTTATACGAGGAACAGCAGCGTGGTCATTAGGGAAAATTGGTTCTCCAAA
AGCATATGAAGCAATTATTTCAGCTATGGAAAAAGAAACCGATAGTCAAGTTCTTTTTGAAATGGAAAAAGGTTTATCTT
TTCAAAAACAATCATAA

Upstream 100 bases:

>100_bases
TGATTTAGCAAAACCCCGCCGTTATGAAATTGCGGCAGTCCTAAATCGTATGCGTAATGGCAAGTTTGTATTAAATCATA
TATAGAAAGGAGGGGGCGTC

Downstream 100 bases:

>100_bases
AGTGAGATTCCTATTCTGAAGGAATTCATTTTTTCCTTTGCAAAAAAATTATACTCAAAAATTAAGGTCTAATGTAACTT
GAACAAAAACGGACATGACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MQVAQLKEDIQSYAKEIGIDKIGFTTADVFTELKERLRRQQELQYQSGFEKGSIEERTEPKRLLPEAKSIISIAVAYPQK
MHDAPRSTKEERRGIFARASWGIDYHVALRERLNKLSEYIQTKYPDAVNKIMVDTGELSDRAVAERSGIGFSGKNTSIIT
PEFGSFVYLGEMITNIPFIPDSPVEESCGDCTICMDACPTGALVQGGQLNAQRCIAFLTQTKDFLPDEFRSKIGNRIYGC
DTCQQVCPYNRGIDSHFHQELEPEPESAKPKLKPMLHLSNKEFKEKFGYMSGSWRGKKPLQRNALIAIGHYKDKSAIEDL
IKVMNNDPRPVIRGTAAWSLGKIGSPKAYEAIISAMEKETDSQVLFEMEKGLSFQKQS

Sequences:

>Translated_378_residues
MQVAQLKEDIQSYAKEIGIDKIGFTTADVFTELKERLRRQQELQYQSGFEKGSIEERTEPKRLLPEAKSIISIAVAYPQK
MHDAPRSTKEERRGIFARASWGIDYHVALRERLNKLSEYIQTKYPDAVNKIMVDTGELSDRAVAERSGIGFSGKNTSIIT
PEFGSFVYLGEMITNIPFIPDSPVEESCGDCTICMDACPTGALVQGGQLNAQRCIAFLTQTKDFLPDEFRSKIGNRIYGC
DTCQQVCPYNRGIDSHFHQELEPEPESAKPKLKPMLHLSNKEFKEKFGYMSGSWRGKKPLQRNALIAIGHYKDKSAIEDL
IKVMNNDPRPVIRGTAAWSLGKIGSPKAYEAIISAMEKETDSQVLFEMEKGLSFQKQS
>Mature_378_residues
MQVAQLKEDIQSYAKEIGIDKIGFTTADVFTELKERLRRQQELQYQSGFEKGSIEERTEPKRLLPEAKSIISIAVAYPQK
MHDAPRSTKEERRGIFARASWGIDYHVALRERLNKLSEYIQTKYPDAVNKIMVDTGELSDRAVAERSGIGFSGKNTSIIT
PEFGSFVYLGEMITNIPFIPDSPVEESCGDCTICMDACPTGALVQGGQLNAQRCIAFLTQTKDFLPDEFRSKIGNRIYGC
DTCQQVCPYNRGIDSHFHQELEPEPESAKPKLKPMLHLSNKEFKEKFGYMSGSWRGKKPLQRNALIAIGHYKDKSAIEDL
IKVMNNDPRPVIRGTAAWSLGKIGSPKAYEAIISAMEKETDSQVLFEMEKGLSFQKQS

Specific function: Unknown

COG id: COG1600

COG function: function code C; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 HEAT-like PBS-type repeats [H]

Homologues:

Organism=Escherichia coli, GI1790608, Length=377, Percent_Identity=30.5039787798408, Blast_Score=190, Evalue=1e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004453
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR013542
- InterPro:   IPR009051
- InterPro:   IPR004155 [H]

Pfam domain/function: PF08331 DUF1730; PF03130 HEAT_PBS [H]

EC number: NA

Molecular weight: Translated: 42581; Mature: 42581

Theoretical pI: Translated: 7.40; Mature: 7.40

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVAQLKEDIQSYAKEIGIDKIGFTTADVFTELKERLRRQQELQYQSGFEKGSIEERTEP
CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
KRLLPEAKSIISIAVAYPQKMHDAPRSTKEERRGIFARASWGIDYHVALRERLNKLSEYI
HHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHH
QTKYPDAVNKIMVDTGELSDRAVAERSGIGFSGKNTSIITPEFGSFVYLGEMITNIPFIP
HHCCCHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCC
DSPVEESCGDCTICMDACPTGALVQGGQLNAQRCIAFLTQTKDFLPDEFRSKIGNRIYGC
CCCHHHCCCCEEEECCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCEECC
DTCQQVCPYNRGIDSHFHQELEPEPESAKPKLKPMLHLSNKEFKEKFGYMSGSWRGKKPL
HHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHCCCHHHHHHHCCCCCCCCCCCCC
QRNALIAIGHYKDKSAIEDLIKVMNNDPRPVIRGTAAWSLGKIGSPKAYEAIISAMEKET
CCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEECCCHHHCCCCCCCHHHHHHHHHHHHCC
DSQVLFEMEKGLSFQKQS
HHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MQVAQLKEDIQSYAKEIGIDKIGFTTADVFTELKERLRRQQELQYQSGFEKGSIEERTEP
CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
KRLLPEAKSIISIAVAYPQKMHDAPRSTKEERRGIFARASWGIDYHVALRERLNKLSEYI
HHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHH
QTKYPDAVNKIMVDTGELSDRAVAERSGIGFSGKNTSIITPEFGSFVYLGEMITNIPFIP
HHCCCHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCC
DSPVEESCGDCTICMDACPTGALVQGGQLNAQRCIAFLTQTKDFLPDEFRSKIGNRIYGC
CCCHHHCCCCEEEECCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCEECC
DTCQQVCPYNRGIDSHFHQELEPEPESAKPKLKPMLHLSNKEFKEKFGYMSGSWRGKKPL
HHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHCCCHHHHHHHCCCCCCCCCCCCC
QRNALIAIGHYKDKSAIEDLIKVMNNDPRPVIRGTAAWSLGKIGSPKAYEAIISAMEKET
CCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEECCCHHHCCCCCCCHHHHHHHHHHHHCC
DSQVLFEMEKGLSFQKQS
HHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]