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The map label for this gene is 23098520

Identifier: 23098520

GI number: 23098520

Start: 1107895

End: 1108398

Strand: Direct

Name: 23098520

Synonym: OB1065

Alternate gene names: NA

Gene position: 1107895-1108398 (Clockwise)

Preceding gene: 23098519

Following gene: 23098522

Centisome position: 30.52

GC content: 32.74

Gene sequence:

>504_bases
ATGGATCGATTACAATCATTTGCTCCAGTTATTCCTGATGATCCAAGAGTATTAATAGTTGGTTCAATGCCTGGAGTGAA
ATCACTTGCAGAACAACAATATTATGGTAATCCAAGAAATCATTTTTGGAGCATCATGTTTACATTATTGGAAGAAAAAC
GTGTAGACAACTATCAAGATAAATTAAGTATGTTAAAAAGACATGGTATTGCTCTATGGGATACCATTGGAAGTTGTTAT
CGAGAAGGGAGTTTAGATGTGAATATTCAAGATGCTGAACCTAACGACATTATTGGATTAGTACAAGATTACCCCACAAT
TAAATTGATTGGCTGCAATGGCACAAAAGCGTATGACATATTTAGAAAAAATTTTTCTTTAGAAAGCTTCCCGAATGTTG
ATGTGGTTAAATTACCTTCTACTAGTCCAATTCCTGGTAAATACAATAAAAACTTAGAAGAAAAGATCGAGGCTTGGAAA
ATTATTATAGATAGTAACGAATAA

Upstream 100 bases:

>100_bases
CACGTTCTAAGGGCAACCAAGAATTACCACATCCTGTGAAAGCTCATTTTCACCGGATTTTAGAACAACCTCTTATAGAG
GAAGGATGGATGTTATTTAT

Downstream 100 bases:

>100_bases
CCCTCCAAGCTAACGACTAAGTAATGATTACATGACGTTGATAATCATTTTTGTATTTATGATAAAAATCGATCATGGGT
TGCAATTGGTCTTTAAAATC

Product: hypothetical protein

Products: NA

Alternate protein names: Uracil-DNA Glycosylase Superfamily Protein; Uracil-DNA Glycosylase Superfamily; T/U Mismatch-Specific DNA Glycosylase; Mug GT/U Mismatch-Specific DNA Glycosylase; G/U Mismatch-Specific DNA Glycosylase; GT/U Mismatch-Specific DNA Glycosylase-Like Protein; DNA Glycosylase; G/U Mismatch-Specific Uracil-DNA Glycosylase; Uracil DNA Glycosylase Superfamily; G-T/U Mismatch-Specific DNA Glycosylase-Like; YjeF-Like Protein; GT/U Mismatch-Specific Uracil/Thymine DNA-Glycosylase

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MDRLQSFAPVIPDDPRVLIVGSMPGVKSLAEQQYYGNPRNHFWSIMFTLLEEKRVDNYQDKLSMLKRHGIALWDTIGSCY
REGSLDVNIQDAEPNDIIGLVQDYPTIKLIGCNGTKAYDIFRKNFSLESFPNVDVVKLPSTSPIPGKYNKNLEEKIEAWK
IIIDSNE

Sequences:

>Translated_167_residues
MDRLQSFAPVIPDDPRVLIVGSMPGVKSLAEQQYYGNPRNHFWSIMFTLLEEKRVDNYQDKLSMLKRHGIALWDTIGSCY
REGSLDVNIQDAEPNDIIGLVQDYPTIKLIGCNGTKAYDIFRKNFSLESFPNVDVVKLPSTSPIPGKYNKNLEEKIEAWK
IIIDSNE
>Mature_167_residues
MDRLQSFAPVIPDDPRVLIVGSMPGVKSLAEQQYYGNPRNHFWSIMFTLLEEKRVDNYQDKLSMLKRHGIALWDTIGSCY
REGSLDVNIQDAEPNDIIGLVQDYPTIKLIGCNGTKAYDIFRKNFSLESFPNVDVVKLPSTSPIPGKYNKNLEEKIEAWK
IIIDSNE

Specific function: Unknown

COG id: COG3663

COG function: function code L; G:T/U mismatch-specific DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19052; Mature: 19052

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRLQSFAPVIPDDPRVLIVGSMPGVKSLAEQQYYGNPRNHFWSIMFTLLEEKRVDNYQD
CCCCHHCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHH
KLSMLKRHGIALWDTIGSCYREGSLDVNIQDAEPNDIIGLVQDYPTIKLIGCNGTKAYDI
HHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCEEEEEECCCCCHHHH
FRKNFSLESFPNVDVVKLPSTSPIPGKYNKNLEEKIEAWKIIIDSNE
HHHCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHEEEEEEECCC
>Mature Secondary Structure
MDRLQSFAPVIPDDPRVLIVGSMPGVKSLAEQQYYGNPRNHFWSIMFTLLEEKRVDNYQD
CCCCHHCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHH
KLSMLKRHGIALWDTIGSCYREGSLDVNIQDAEPNDIIGLVQDYPTIKLIGCNGTKAYDI
HHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCEEEEEECCCCCHHHH
FRKNFSLESFPNVDVVKLPSTSPIPGKYNKNLEEKIEAWKIIIDSNE
HHHCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA