Definition Oceanobacillus iheyensis HTE831, complete genome.
Accession NC_004193
Length 3,630,528

Click here to switch to the map view.

The map label for this gene is yecA [C]

Identifier: 23098487

GI number: 23098487

Start: 1072875

End: 1073996

Strand: Direct

Name: yecA [C]

Synonym: OB1032

Alternate gene names: 23098487

Gene position: 1072875-1073996 (Clockwise)

Preceding gene: 23098486

Following gene: 23098488

Centisome position: 29.55

GC content: 32.17

Gene sequence:

>1122_bases
ATGATAGAGAATGCAGAAATACTAAGTTATATACAAGAGCTAAAGCAATATTCAAAAGTAAAACTAGATAAATTGCGACG
CCTTCATGCAATTCCTAATGCAAGTCAGCTTAATAAAGCAAAACTAGCGGAGCGATTGGCAACAGAGATTCCAGGTAGCT
TTGAAGTTACACTTACGTACTTGAATAAACCTATAATTGATTTATTCAATGACTTCCAGCGAAACAATGGTGTTATTCCA
GTACGTGTTAAAACGGAAGAACTGCTCTTTTTACAAGTGCTTGGACTAATATTTATTAAAGAAGTAGATGACGACGAGAT
AGCTATTATGCCAAGAGAGTTACTCCAAGTATATGATAAAATACAATCTAATGAGTTGCAGAAGACAGCAATTCGAAATA
CGAAATGGCATAAATTGACGGAAGGTATGTTGTATTATTACGGCGTGATGCAGCAAGAAATCTTGATTGCTCAAGTTGAA
AAATTTACAAATGAAAAAATTGATTCATTTGAATTTCTACATGTCATGAAGATTGCCGAAACAATGTATCAATCATTTGA
AATACAAGTAGATAAAAGAATATATATAGATTTTCGAGTGGATGATCCAGACTTTATTTTAGTTGAACAATCGAAACGAA
AACAAATACCTTATTATCCTTTTACAGAACAAGAACTTTTACAAAGTAGTGAAGATGGATTTATTCCATTAACTCAAGGG
TTTAAAAAACTTCGTAAGTATATATTACGTAATTTTGATATCGAAGAAAGTGATGTTTTAGATATCCTTGATAATGTGAT
TGTTATAAGTAATATGGATCAAAAGCCGACCGCACCACTTCAGTATTTAAATGAAGTATTTGAGTTTAATTCAGAAAAAC
AATTACAAGAATTTATACCACTAGTAATGAATGCAACAAACGACGTTCGGTTATGGATGTTGAAAGGCCATACACCTAGT
GAAATCACTCAAATGAATAATTCGAACTTCAAAGAGCTACCAAAAGGCGAATTTGTACTTCAAAATGAAGATACAAGTCC
CATAAAAAAATCAAAAATTGGCAGAAATGATCCTTGCCCTTGTGGTAGCGGGAAGAAATACAAAAAATGTTGTATAGCAT
AA

Upstream 100 bases:

>100_bases
GTTTGACGATTTGTACGTGTAAACATTACAATATAATAATGTTGAATTTAGATAGTAATATCTATACATGAATAAAAGAA
TTAAAAAGGTGAATATAATT

Downstream 100 bases:

>100_bases
TTTGTGGACAAAATTAAAAAATGATTTTTCCCGTACGGACTATAACCCTTACGTTAATCTTATGAAGTTTAAAGAGGAAA
AAGGGAATACGCTTTAAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: SecC Motif-Containing Protein; SEC-C Domain-Containing Protein Domain-Containing Protein; SecC Motif Containing Protein

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MIENAEILSYIQELKQYSKVKLDKLRRLHAIPNASQLNKAKLAERLATEIPGSFEVTLTYLNKPIIDLFNDFQRNNGVIP
VRVKTEELLFLQVLGLIFIKEVDDDEIAIMPRELLQVYDKIQSNELQKTAIRNTKWHKLTEGMLYYYGVMQQEILIAQVE
KFTNEKIDSFEFLHVMKIAETMYQSFEIQVDKRIYIDFRVDDPDFILVEQSKRKQIPYYPFTEQELLQSSEDGFIPLTQG
FKKLRKYILRNFDIEESDVLDILDNVIVISNMDQKPTAPLQYLNEVFEFNSEKQLQEFIPLVMNATNDVRLWMLKGHTPS
EITQMNNSNFKELPKGEFVLQNEDTSPIKKSKIGRNDPCPCGSGKKYKKCCIA

Sequences:

>Translated_373_residues
MIENAEILSYIQELKQYSKVKLDKLRRLHAIPNASQLNKAKLAERLATEIPGSFEVTLTYLNKPIIDLFNDFQRNNGVIP
VRVKTEELLFLQVLGLIFIKEVDDDEIAIMPRELLQVYDKIQSNELQKTAIRNTKWHKLTEGMLYYYGVMQQEILIAQVE
KFTNEKIDSFEFLHVMKIAETMYQSFEIQVDKRIYIDFRVDDPDFILVEQSKRKQIPYYPFTEQELLQSSEDGFIPLTQG
FKKLRKYILRNFDIEESDVLDILDNVIVISNMDQKPTAPLQYLNEVFEFNSEKQLQEFIPLVMNATNDVRLWMLKGHTPS
EITQMNNSNFKELPKGEFVLQNEDTSPIKKSKIGRNDPCPCGSGKKYKKCCIA
>Mature_373_residues
MIENAEILSYIQELKQYSKVKLDKLRRLHAIPNASQLNKAKLAERLATEIPGSFEVTLTYLNKPIIDLFNDFQRNNGVIP
VRVKTEELLFLQVLGLIFIKEVDDDEIAIMPRELLQVYDKIQSNELQKTAIRNTKWHKLTEGMLYYYGVMQQEILIAQVE
KFTNEKIDSFEFLHVMKIAETMYQSFEIQVDKRIYIDFRVDDPDFILVEQSKRKQIPYYPFTEQELLQSSEDGFIPLTQG
FKKLRKYILRNFDIEESDVLDILDNVIVISNMDQKPTAPLQYLNEVFEFNSEKQLQEFIPLVMNATNDVRLWMLKGHTPS
EITQMNNSNFKELPKGEFVLQNEDTSPIKKSKIGRNDPCPCGSGKKYKKCCIA

Specific function: Unknown

COG id: COG0653

COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43602; Mature: 43602

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIENAEILSYIQELKQYSKVKLDKLRRLHAIPNASQLNKAKLAERLATEIPGSFEVTLTY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEE
LNKPIIDLFNDFQRNNGVIPVRVKTEELLFLQVLGLIFIKEVDDDEIAIMPRELLQVYDK
CCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHH
IQSNELQKTAIRNTKWHKLTEGMLYYYGVMQQEILIAQVEKFTNEKIDSFEFLHVMKIAE
HHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
TMYQSFEIQVDKRIYIDFRVDDPDFILVEQSKRKQIPYYPFTEQELLQSSEDGFIPLTQG
HHHHHHEEEECCEEEEEEEECCCCEEEEECCCCCCCCCCCCCHHHHHCCCCCCCEEHHHH
FKKLRKYILRNFDIEESDVLDILDNVIVISNMDQKPTAPLQYLNEVFEFNSEKQLQEFIP
HHHHHHHHHHCCCCCHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHH
LVMNATNDVRLWMLKGHTPSEITQMNNSNFKELPKGEFVLQNEDTSPIKKSKIGRNDPCP
HHHCCCCCEEEEEEECCCHHHHHHCCCCCCCCCCCCCEEEECCCCCCHHHHCCCCCCCCC
CGSGKKYKKCCIA
CCCCCHHHHHCCC
>Mature Secondary Structure
MIENAEILSYIQELKQYSKVKLDKLRRLHAIPNASQLNKAKLAERLATEIPGSFEVTLTY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEE
LNKPIIDLFNDFQRNNGVIPVRVKTEELLFLQVLGLIFIKEVDDDEIAIMPRELLQVYDK
CCCHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHH
IQSNELQKTAIRNTKWHKLTEGMLYYYGVMQQEILIAQVEKFTNEKIDSFEFLHVMKIAE
HHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
TMYQSFEIQVDKRIYIDFRVDDPDFILVEQSKRKQIPYYPFTEQELLQSSEDGFIPLTQG
HHHHHHEEEECCEEEEEEEECCCCEEEEECCCCCCCCCCCCCHHHHHCCCCCCCEEHHHH
FKKLRKYILRNFDIEESDVLDILDNVIVISNMDQKPTAPLQYLNEVFEFNSEKQLQEFIP
HHHHHHHHHHCCCCCHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHH
LVMNATNDVRLWMLKGHTPSEITQMNNSNFKELPKGEFVLQNEDTSPIKKSKIGRNDPCP
HHHCCCCCEEEEEEECCCHHHHHHCCCCCCCCCCCCCEEEECCCCCCHHHHCCCCCCCCC
CGSGKKYKKCCIA
CCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA