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The map label for this gene is ygaF [H]

Identifier: 23098358

GI number: 23098358

Start: 954195

End: 954671

Strand: Direct

Name: ygaF [H]

Synonym: OB0903

Alternate gene names: 23098358

Gene position: 954195-954671 (Clockwise)

Preceding gene: 23098357

Following gene: 23098359

Centisome position: 26.28

GC content: 32.08

Gene sequence:

>477_bases
ATGTCTGTAGAAATAGGTTCAAAAGTCAACGATTTTAGTTTACCAAATCAACATGGTGAAAATATAAGCTTGTCTGATTA
TCAAGGGAAATATGTAGTTTTATATTTTTATCCAAAAGATATGACACCAGGTTGTACAACAGAAGCATGTGATTTTCGGG
ATAATCACGAAAGCTTTAAAGAATTAGATGCAGTAATACTGGGAGTTAGTCCTGATCCAGAAGCAAGACATCAGAAGTTT
ATAGACAAACATGAATTACCATTTAATCTTCTTTCAGATGAAGACCATCAACTCGCAGAACAATTCGACGTTTGGAAGTT
AAAGAAGAACTTTGGGAAAGAATATTATGGAATTGAGCGATCTACTTTTATTATAGATAAAGATGGAAAACTAATAAAAG
AATATAGAAAAGTAAGAGTGAAGGATCATGTTTCTGATGCTTTAGAATACATCAAAGAAATCAATGAAGTGGGATAG

Upstream 100 bases:

>100_bases
GTGCAAATTGGATCTAGGGAATCTAGGAGCAGGGATGAATGAATATCTCTATTTAATGTGATATATTGAAAGAAAATGGT
TATATTGTGGAGGGTTAATA

Downstream 100 bases:

>100_bases
AGGTTAAATTATGCGTATATATACCAGATCTGGAGATAAAGGTTTAACTTCATTAGTATATGGACAACGAGTTCCGAAGA
ATCATTTGCGAGTAGAAGCA

Product: bacterioferritin comigratory protein

Products: NA

Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MSVEIGSKVNDFSLPNQHGENISLSDYQGKYVVLYFYPKDMTPGCTTEACDFRDNHESFKELDAVILGVSPDPEARHQKF
IDKHELPFNLLSDEDHQLAEQFDVWKLKKNFGKEYYGIERSTFIIDKDGKLIKEYRKVRVKDHVSDALEYIKEINEVG

Sequences:

>Translated_158_residues
MSVEIGSKVNDFSLPNQHGENISLSDYQGKYVVLYFYPKDMTPGCTTEACDFRDNHESFKELDAVILGVSPDPEARHQKF
IDKHELPFNLLSDEDHQLAEQFDVWKLKKNFGKEYYGIERSTFIIDKDGKLIKEYRKVRVKDHVSDALEYIKEINEVG
>Mature_157_residues
SVEIGSKVNDFSLPNQHGENISLSDYQGKYVVLYFYPKDMTPGCTTEACDFRDNHESFKELDAVILGVSPDPEARHQKFI
DKHELPFNLLSDEDHQLAEQFDVWKLKKNFGKEYYGIERSTFIIDKDGKLIKEYRKVRVKDHVSDALEYIKEINEVG

Specific function: Unknown

COG id: COG1225

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI32189392, Length=166, Percent_Identity=34.9397590361446, Blast_Score=74, Evalue=4e-14,
Organism=Homo sapiens, GI4505591, Length=136, Percent_Identity=36.7647058823529, Blast_Score=74, Evalue=8e-14,
Organism=Homo sapiens, GI32455266, Length=136, Percent_Identity=36.7647058823529, Blast_Score=74, Evalue=8e-14,
Organism=Homo sapiens, GI32455264, Length=136, Percent_Identity=36.7647058823529, Blast_Score=74, Evalue=8e-14,
Organism=Escherichia coli, GI1788825, Length=151, Percent_Identity=45.0331125827815, Blast_Score=143, Evalue=7e-36,
Organism=Caenorhabditis elegans, GI193204376, Length=129, Percent_Identity=37.984496124031, Blast_Score=77, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI32565831, Length=129, Percent_Identity=37.984496124031, Blast_Score=77, Evalue=4e-15,
Organism=Saccharomyces cerevisiae, GI6322180, Length=158, Percent_Identity=35.4430379746835, Blast_Score=85, Evalue=7e-18,
Organism=Drosophila melanogaster, GI17738015, Length=143, Percent_Identity=33.5664335664336, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24656348, Length=134, Percent_Identity=32.8358208955224, Blast_Score=63, Evalue=6e-11,
Organism=Drosophila melanogaster, GI17864676, Length=134, Percent_Identity=32.8358208955224, Blast_Score=63, Evalue=6e-11,

Paralogues:

None

Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: =1.11.1.15 [H]

Molecular weight: Translated: 18367; Mature: 18236

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVEIGSKVNDFSLPNQHGENISLSDYQGKYVVLYFYPKDMTPGCTTEACDFRDNHESFK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHH
ELDAVILGVSPDPEARHQKFIDKHELPFNLLSDEDHQLAEQFDVWKLKKNFGKEYYGIER
HHHEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHCCCCC
STFIIDKDGKLIKEYRKVRVKDHVSDALEYIKEINEVG
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SVEIGSKVNDFSLPNQHGENISLSDYQGKYVVLYFYPKDMTPGCTTEACDFRDNHESFK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHH
ELDAVILGVSPDPEARHQKFIDKHELPFNLLSDEDHQLAEQFDVWKLKKNFGKEYYGIER
HHHEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHCCCCC
STFIIDKDGKLIKEYRKVRVKDHVSDALEYIKEINEVG
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]