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The map label for this gene is yhfR [C]

Identifier: 23098340

GI number: 23098340

Start: 938986

End: 939363

Strand: Direct

Name: yhfR [C]

Synonym: OB0885

Alternate gene names: 23098340

Gene position: 938986-939363 (Clockwise)

Preceding gene: 23098339

Following gene: 23098341

Centisome position: 25.86

GC content: 34.66

Gene sequence:

>378_bases
ATGAGAAAAGAACTGGATGAAAATAAGCCTATATTTTTGCAAATAAAAGACCACGTAGAAGACTCGATTATGGATGATTC
TTATAAATCTGGAGATCGAGTACCTTCTACAAATGAATTTGCCGCCTTTTATCAAATTAATCCTGCTACTGCTGGTAAGG
GTATAAATGAATTGGTGGCAGAGGGAATTTTGGTGAAAAGGAGAGGGGTAGGCATGTTTGTTACAGAATCTGCCAAAGAT
ATTGTAATTGAAAAAAGAAAGCAAACATTTTATGACCACTATATGCTTCCATTAAAACGAGAAGCAAAAAAACTCCGTAT
GGATAAAGATGAGATATTAGAAATGTGGCAAAGGGAGGATAATGTTAATGAAGATTGA

Upstream 100 bases:

>100_bases
AGCATATTCCTCACTTTATTAAAAAATGGGTTTGACTTTTATAATCTTATGTTATATGGTTAGTTACATAAGTAATTAAC
CAATTAAGGAATGAACTAAA

Downstream 100 bases:

>100_bases
AGTAAACAACCTTAGTAAAAAGTATGGTGATAAGTATGCTTTAAATAATGTCTCCTTCACACTTGAGAAAAATAAAATCT
ACGGCTTACTCGGTAGAAAT

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulator; Regulatory Protein GntR HTH; Transcription Regulator; Transcriptional Regulator Gntr Family; GntR-Family Transcriptional Regulator; Transcriptional Regulator GntR Family Protein; Transcriptional Regulatory Protein; Transcriptional Regulator Transcription Regulator Protein

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MRKELDENKPIFLQIKDHVEDSIMDDSYKSGDRVPSTNEFAAFYQINPATAGKGINELVAEGILVKRRGVGMFVTESAKD
IVIEKRKQTFYDHYMLPLKREAKKLRMDKDEILEMWQREDNVNED

Sequences:

>Translated_125_residues
MRKELDENKPIFLQIKDHVEDSIMDDSYKSGDRVPSTNEFAAFYQINPATAGKGINELVAEGILVKRRGVGMFVTESAKD
IVIEKRKQTFYDHYMLPLKREAKKLRMDKDEILEMWQREDNVNED
>Mature_125_residues
MRKELDENKPIFLQIKDHVEDSIMDDSYKSGDRVPSTNEFAAFYQINPATAGKGINELVAEGILVKRRGVGMFVTESAKD
IVIEKRKQTFYDHYMLPLKREAKKLRMDKDEILEMWQREDNVNED

Specific function: Unknown

COG id: COG1725

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14612; Mature: 14612

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKELDENKPIFLQIKDHVEDSIMDDSYKSGDRVPSTNEFAAFYQINPATAGKGINELVA
CCCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHH
EGILVKRRGVGMFVTESAKDIVIEKRKQTFYDHYMLPLKREAKKLRMDKDEILEMWQRED
CCCCEECCCCCEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHCC
NVNED
CCCCC
>Mature Secondary Structure
MRKELDENKPIFLQIKDHVEDSIMDDSYKSGDRVPSTNEFAAFYQINPATAGKGINELVA
CCCCCCCCCCEEEEEHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHH
EGILVKRRGVGMFVTESAKDIVIEKRKQTFYDHYMLPLKREAKKLRMDKDEILEMWQRED
CCCCEECCCCCEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHCC
NVNED
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA