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The map label for this gene is yaaJ [C]

Identifier: 23098327

GI number: 23098327

Start: 925542

End: 926894

Strand: Reverse

Name: yaaJ [C]

Synonym: OB0872

Alternate gene names: 23098327

Gene position: 926894-925542 (Counterclockwise)

Preceding gene: 23098343

Following gene: 23098323

Centisome position: 25.53

GC content: 39.02

Gene sequence:

>1353_bases
TTGAAAGAGTTTTTAGAAGAGGTAAGTTCATTTGTATGGGGACCACCAACATTGATTTTAATTGTTGGAGCAGGGCTTTA
CCTCACTTTTCGACTTGGATTCCTGCAGATTAGGGCGTTACCGTATGCTTTAAGACTAGCATTTAGCCCACAAAAACAAG
ATAAGAAATCAAAAGGTGACATTAGTCATTACCAGGCATTAACAACTGCGATGGCCGCAACCATAGGTACAGGTAATATT
GTTGGGGTTGCAACTGCGGTCGTTGCTGGTGGACCTGGTGCAGTTTTTTGGATGTGGATAACTGCTGTGTTTGGAATGGC
CACCAAATATTCTGAAGCCATATTAGCAGTGAAATATCGTGTCACAGATGATAACGGTAAAATGGCCGGCGGACCAATGT
ATTACTTAGAACGTGGCTTAAATTTAAAATGGTTAGGTATTATATTTGCTATATTTGGTTCCATTGCAGCATTTGGTATC
GGGAATATGGTACAGTCTAACTCCGTTTCAGATGCGTTACAAACATCGTTTTCTATCCCTACATGGGTAACAGGTATTGT
GCTAACTGTCCTTACTGCACTTGTTGTCCTTGGAGGAATTAAAACAATTGGAAAAGTTACTTCATTCTTCGTACCAATTA
TGGCTGTTATTTATGTATTTGGTGGTCTTACCATCATGGTTATGAATTTTGATCTAATTCCAGCCGCAGTTAATCTTATC
TTAACAGATGCATTTACTGGCAGTGCTGTTGGCGGAGGAATTTTAGGTACCGTAATACGATATGGGGTAGCACGTGGTGT
ATTCTCTAACGAAGCTGGGCTTGGTTCTGCTCCGATTGCCGCAGCTGCTGCCAGAACAGATTATCCAGGTAGACAAGCAT
TAGTATCAATGACACAAGTGTTTATTGATACAATTATTGTTTGTTCTATTACGGGCATAACTATTGTAATGGCAGATATG
TATAGTACGGGAGCTGACGGAGCTTCGTTAACTGGGGCGTCATTTGCATATTTCTTAGGTGGATTTGGAGAACATATAGT
AACTATTTCTATCGTATTCTTCGCATTTTCCACTCTCGTTGGATGGTCTTATTACGGAGAGAAATGTTTTGGGTATTTAT
TTAAGAATCAAAATGCAATGCGCGCATATCGATTAATTTTTGTTCTGATTGTTTTCTATGGAGCAGTTGAGGTAATCGAT
GTAGTATGGCTAATGTCAGATATATTCAATGCTTTAATGGCTGTACCGAATATTATTGGTCTCCTCGGTTTATCTGGAGT
AGTAGTCTATGAAACGAAACGATTTATGAAAATTGCAAAAGAAGAAAAACAACAAGCAAAAAGAACTGGATAA

Upstream 100 bases:

>100_bases
AATTTCGATAAAAAATATAAAATGTATTAAATTTCCTCTTGACATCCAAACGAATATTCGAAATATTATATACTATACAA
AAAAAGAGGGGGCTAGAAAA

Downstream 100 bases:

>100_bases
AAAATTATCAACTTGATAAAAGCAGTGAGGTTGGGACAAAAGTATTTATGCAAAAAATAAATTCGAATGAATGATTATTG
GAAATCCGCTTCAGAAATAT

Product: amino acid transporter

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MKEFLEEVSSFVWGPPTLILIVGAGLYLTFRLGFLQIRALPYALRLAFSPQKQDKKSKGDISHYQALTTAMAATIGTGNI
VGVATAVVAGGPGAVFWMWITAVFGMATKYSEAILAVKYRVTDDNGKMAGGPMYYLERGLNLKWLGIIFAIFGSIAAFGI
GNMVQSNSVSDALQTSFSIPTWVTGIVLTVLTALVVLGGIKTIGKVTSFFVPIMAVIYVFGGLTIMVMNFDLIPAAVNLI
LTDAFTGSAVGGGILGTVIRYGVARGVFSNEAGLGSAPIAAAAARTDYPGRQALVSMTQVFIDTIIVCSITGITIVMADM
YSTGADGASLTGASFAYFLGGFGEHIVTISIVFFAFSTLVGWSYYGEKCFGYLFKNQNAMRAYRLIFVLIVFYGAVEVID
VVWLMSDIFNALMAVPNIIGLLGLSGVVVYETKRFMKIAKEEKQQAKRTG

Sequences:

>Translated_450_residues
MKEFLEEVSSFVWGPPTLILIVGAGLYLTFRLGFLQIRALPYALRLAFSPQKQDKKSKGDISHYQALTTAMAATIGTGNI
VGVATAVVAGGPGAVFWMWITAVFGMATKYSEAILAVKYRVTDDNGKMAGGPMYYLERGLNLKWLGIIFAIFGSIAAFGI
GNMVQSNSVSDALQTSFSIPTWVTGIVLTVLTALVVLGGIKTIGKVTSFFVPIMAVIYVFGGLTIMVMNFDLIPAAVNLI
LTDAFTGSAVGGGILGTVIRYGVARGVFSNEAGLGSAPIAAAAARTDYPGRQALVSMTQVFIDTIIVCSITGITIVMADM
YSTGADGASLTGASFAYFLGGFGEHIVTISIVFFAFSTLVGWSYYGEKCFGYLFKNQNAMRAYRLIFVLIVFYGAVEVID
VVWLMSDIFNALMAVPNIIGLLGLSGVVVYETKRFMKIAKEEKQQAKRTG
>Mature_450_residues
MKEFLEEVSSFVWGPPTLILIVGAGLYLTFRLGFLQIRALPYALRLAFSPQKQDKKSKGDISHYQALTTAMAATIGTGNI
VGVATAVVAGGPGAVFWMWITAVFGMATKYSEAILAVKYRVTDDNGKMAGGPMYYLERGLNLKWLGIIFAIFGSIAAFGI
GNMVQSNSVSDALQTSFSIPTWVTGIVLTVLTALVVLGGIKTIGKVTSFFVPIMAVIYVFGGLTIMVMNFDLIPAAVNLI
LTDAFTGSAVGGGILGTVIRYGVARGVFSNEAGLGSAPIAAAAARTDYPGRQALVSMTQVFIDTIIVCSITGITIVMADM
YSTGADGASLTGASFAYFLGGFGEHIVTISIVFFAFSTLVGWSYYGEKCFGYLFKNQNAMRAYRLIFVLIVFYGAVEVID
VVWLMSDIFNALMAVPNIIGLLGLSGVVVYETKRFMKIAKEEKQQAKRTG

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=449, Percent_Identity=36.7483296213808, Blast_Score=270, Evalue=2e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 48118; Mature: 48118

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: PS00873 NA_ALANINE_SYMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEFLEEVSSFVWGPPTLILIVGAGLYLTFRLGFLQIRALPYALRLAFSPQKQDKKSKGD
CHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHEECCCCHHCCCCCCC
ISHYQALTTAMAATIGTGNIVGVATAVVAGGPGAVFWMWITAVFGMATKYSEAILAVKYR
HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEE
VTDDNGKMAGGPMYYLERGLNLKWLGIIFAIFGSIAAFGIGNMVQSNSVSDALQTSFSIP
EECCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCH
TWVTGIVLTVLTALVVLGGIKTIGKVTSFFVPIMAVIYVFGGLTIMVMNFDLIPAAVNLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHH
LTDAFTGSAVGGGILGTVIRYGVARGVFSNEAGLGSAPIAAAAARTDYPGRQALVSMTQV
HHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHH
FIDTIIVCSITGITIVMADMYSTGADGASLTGASFAYFLGGFGEHIVTISIVFFAFSTLV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GWSYYGEKCFGYLFKNQNAMRAYRLIFVLIVFYGAVEVIDVVWLMSDIFNALMAVPNIIG
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLGLSGVVVYETKRFMKIAKEEKQQAKRTG
HHHCCCEEEEHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKEFLEEVSSFVWGPPTLILIVGAGLYLTFRLGFLQIRALPYALRLAFSPQKQDKKSKGD
CHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHEECCCCHHCCCCCCC
ISHYQALTTAMAATIGTGNIVGVATAVVAGGPGAVFWMWITAVFGMATKYSEAILAVKYR
HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEEE
VTDDNGKMAGGPMYYLERGLNLKWLGIIFAIFGSIAAFGIGNMVQSNSVSDALQTSFSIP
EECCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCH
TWVTGIVLTVLTALVVLGGIKTIGKVTSFFVPIMAVIYVFGGLTIMVMNFDLIPAAVNLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHH
LTDAFTGSAVGGGILGTVIRYGVARGVFSNEAGLGSAPIAAAAARTDYPGRQALVSMTQV
HHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHH
FIDTIIVCSITGITIVMADMYSTGADGASLTGASFAYFLGGFGEHIVTISIVFFAFSTLV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GWSYYGEKCFGYLFKNQNAMRAYRLIFVLIVFYGAVEVIDVVWLMSDIFNALMAVPNIIG
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLGLSGVVVYETKRFMKIAKEEKQQAKRTG
HHHCCCEEEEHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]