| Definition | Oceanobacillus iheyensis HTE831, complete genome. |
|---|---|
| Accession | NC_004193 |
| Length | 3,630,528 |
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The map label for this gene is gerAC [H]
Identifier: 23098151
GI number: 23098151
Start: 733322
End: 734476
Strand: Direct
Name: gerAC [H]
Synonym: OB0696
Alternate gene names: 23098151
Gene position: 733322-734476 (Clockwise)
Preceding gene: 23098150
Following gene: 23098152
Centisome position: 20.2
GC content: 35.06
Gene sequence:
>1155_bases ATGAAAAAGTTTCTAGGTAGCATTTTAATTAGTTCTCTTCTTCTTTTAGCAGGTTGCTGGGACAGCTTAGAGTTGGAGGA AAGAGCTTTTGTATCGGGAATTGCGATTGATCTCACTAACGATAATACCAATAACATATTAAATGTAACCGAACAAATAG TGGTACCTAGTGGACTGATTATATTACCAGCTTCTAGTGGTTCCGGCAAAGGGTATCGAAATATTGTGGAACAGGGGAGA ACGATTTATGAAGTAGGCGATATCATTGAAAGACAAGAGGATAGAAAATTAGATGGTAGTCATATTGAGGTTGTTGTTAT TTCTGACGAAGTCGTAAAAGACGAGTTTGAATTAGCAGATGTAGTGGATATATTCATGCGTGAAAAACGGATGAATAGAG AAGTTATTTTATCGATAGCGGAAGGGTCTGCTGGTGAATTACTAAACATAGAGCCACAAGATGTAAAAATGCCTTCTCAA TATTTAACGCAGCTCATTGTTGGGAATTATCGTTTAGTTGGAGGAGATCCACAACGATTTGGAAATATGCAACAATATTT TTTACGAAAGAGAAGTTTTACCTTGCCATTATTAACTACAAAAGGGTCTTCAACTGGTGTTGAATTAGATGGTCTAGCTG TTTTTAGTGGGGAAAATTCAAAAATGGTTGGGGCTTTAAAAAATGAAAATGTAGATGGTTATATGCTTATACAACCGATG TATAACGGCGCTATTACAGCTGAATATGATGGATCCTTTGCAACTTTTCATATTCCAGATGGGACAACAAAGATAAAATT AAAAAATAAAGACCCTGAAAATCTTCACTTTGAGTTTGAAACTTCTTTAGATGCTGAATTAGTGGAAACCTTTTATTCAG AAGATTTTTTTGCTCATAAAAACATGAAAAAATTGGAAGATTCATTAAAAAAAAGAGTGGAGAGCCTAATAACAGGCACA ATAGAACAAGTTAGAGATGAGTACGAAACTGATATCCTAGGACTTGGTGAACATCTGAAGACTAAGGAGCCGAAGATTTG GAAGCAAGTTGAAAAGAATTGGGACTACGGAGAAAATTATTTCAAAGATGTGGAAATAACCTTATCAGTAAATATTGATA TAAGAGAGACAGGAAATTCAGTGGATACGGATTAG
Upstream 100 bases:
>100_bases CTATTGTAGGCTACTCATCCATTATCCTTACAGTACTAACGATAATGACTTTAAATATGATGTATTTTTTCAAACGTAAG AAAAAACAGGAGATAAAACA
Downstream 100 bases:
>100_bases GAGGTAGTTTCTTGATGGATTTTATTAGCGAAAGGTTAAATAATATTGCATTAATTTGCTTAGTATTATCGTTTATAGTT CCAATAACTATAAATTATCT
Product: spore germination protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MKKFLGSILISSLLLLAGCWDSLELEERAFVSGIAIDLTNDNTNNILNVTEQIVVPSGLIILPASSGSGKGYRNIVEQGR TIYEVGDIIERQEDRKLDGSHIEVVVISDEVVKDEFELADVVDIFMREKRMNREVILSIAEGSAGELLNIEPQDVKMPSQ YLTQLIVGNYRLVGGDPQRFGNMQQYFLRKRSFTLPLLTTKGSSTGVELDGLAVFSGENSKMVGALKNENVDGYMLIQPM YNGAITAEYDGSFATFHIPDGTTKIKLKNKDPENLHFEFETSLDAELVETFYSEDFFAHKNMKKLEDSLKKRVESLITGT IEQVRDEYETDILGLGEHLKTKEPKIWKQVEKNWDYGENYFKDVEITLSVNIDIRETGNSVDTD
Sequences:
>Translated_384_residues MKKFLGSILISSLLLLAGCWDSLELEERAFVSGIAIDLTNDNTNNILNVTEQIVVPSGLIILPASSGSGKGYRNIVEQGR TIYEVGDIIERQEDRKLDGSHIEVVVISDEVVKDEFELADVVDIFMREKRMNREVILSIAEGSAGELLNIEPQDVKMPSQ YLTQLIVGNYRLVGGDPQRFGNMQQYFLRKRSFTLPLLTTKGSSTGVELDGLAVFSGENSKMVGALKNENVDGYMLIQPM YNGAITAEYDGSFATFHIPDGTTKIKLKNKDPENLHFEFETSLDAELVETFYSEDFFAHKNMKKLEDSLKKRVESLITGT IEQVRDEYETDILGLGEHLKTKEPKIWKQVEKNWDYGENYFKDVEITLSVNIDIRETGNSVDTD >Mature_384_residues MKKFLGSILISSLLLLAGCWDSLELEERAFVSGIAIDLTNDNTNNILNVTEQIVVPSGLIILPASSGSGKGYRNIVEQGR TIYEVGDIIERQEDRKLDGSHIEVVVISDEVVKDEFELADVVDIFMREKRMNREVILSIAEGSAGELLNIEPQDVKMPSQ YLTQLIVGNYRLVGGDPQRFGNMQQYFLRKRSFTLPLLTTKGSSTGVELDGLAVFSGENSKMVGALKNENVDGYMLIQPM YNGAITAEYDGSFATFHIPDGTTKIKLKNKDPENLHFEFETSLDAELVETFYSEDFFAHKNMKKLEDSLKKRVESLITGT IEQVRDEYETDILGLGEHLKTKEPKIWKQVEKNWDYGENYFKDVEITLSVNIDIRETGNSVDTD
Specific function: Forms a complex at the inner spore membrane which acts as a receptor for L-alanine, thus is involved in the stimulation of germination in response to alanine. Can stimulate germination in the absence of gerD and gerK gene products (fructose and glucose re
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gerABKC lipoprotein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008844 [H]
Pfam domain/function: PF05504 Spore_GerAC [H]
EC number: NA
Molecular weight: Translated: 43232; Mature: 43232
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFLGSILISSLLLLAGCWDSLELEERAFVSGIAIDLTNDNTNNILNVTEQIVVPSGLI CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHEEEEEEEEECCCCCCHHHHHHHEECCCCEE ILPASSGSGKGYRNIVEQGRTIYEVGDIIERQEDRKLDGSHIEVVVISDEVVKDEFELAD EEECCCCCCCHHHHHHHCCCEEEHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHH VVDIFMREKRMNREVILSIAEGSAGELLNIEPQDVKMPSQYLTQLIVGNYRLVGGDPQRF HHHHHHHHHHCCCEEEEEECCCCCCCEEECCHHCCCCCHHHHHHHHHCCEEEECCCHHHH GNMQQYFLRKRSFTLPLLTTKGSSTGVELDGLAVFSGENSKMVGALKNENVDGYMLIQPM CCHHHHHHHHCCCEEEEEEECCCCCCEEECCEEEEECCCCEEEEEECCCCCCCEEEEEEC YNGAITAEYDGSFATFHIPDGTTKIKLKNKDPENLHFEFETSLDAELVETFYSEDFFAHK CCCEEEEEECCCEEEEECCCCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHCCCHHHHC NMKKLEDSLKKRVESLITGTIEQVRDEYETDILGLGEHLKTKEPKIWKQVEKNWDYGENY CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHCCCCCHHHHHHHCCCCCCCCE FKDVEITLSVNIDIRETGNSVDTD EEEEEEEEEEEEEEEECCCCCCCC >Mature Secondary Structure MKKFLGSILISSLLLLAGCWDSLELEERAFVSGIAIDLTNDNTNNILNVTEQIVVPSGLI CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHEEEEEEEEECCCCCCHHHHHHHEECCCCEE ILPASSGSGKGYRNIVEQGRTIYEVGDIIERQEDRKLDGSHIEVVVISDEVVKDEFELAD EEECCCCCCCHHHHHHHCCCEEEHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHH VVDIFMREKRMNREVILSIAEGSAGELLNIEPQDVKMPSQYLTQLIVGNYRLVGGDPQRF HHHHHHHHHHCCCEEEEEECCCCCCCEEECCHHCCCCCHHHHHHHHHCCEEEECCCHHHH GNMQQYFLRKRSFTLPLLTTKGSSTGVELDGLAVFSGENSKMVGALKNENVDGYMLIQPM CCHHHHHHHHCCCEEEEEEECCCCCCEEECCEEEEECCCCEEEEEECCCCCCCEEEEEEC YNGAITAEYDGSFATFHIPDGTTKIKLKNKDPENLHFEFETSLDAELVETFYSEDFFAHK CCCEEEEEECCCEEEEECCCCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHCCCHHHHC NMKKLEDSLKKRVESLITGTIEQVRDEYETDILGLGEHLKTKEPKIWKQVEKNWDYGENY CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHCCCCCHHHHHHHCCCCCCCCE FKDVEITLSVNIDIRETGNSVDTD EEEEEEEEEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3110007; 9639930; 9384377 [H]