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The map label for this gene is ydcI [H]

Identifier: 23098087

GI number: 23098087

Start: 657582

End: 659756

Strand: Direct

Name: ydcI [H]

Synonym: OB0632

Alternate gene names: 23098087

Gene position: 657582-659756 (Clockwise)

Preceding gene: 23098086

Following gene: 23098089

Centisome position: 18.11

GC content: 37.06

Gene sequence:

>2175_bases
ATGTCTGAAATAGATAAAAGTTTGTTAAAAATCGTAACGAATGAAACTGGAGTGGCAACAACTACTGTTGAAAAAGTCAT
TGCATTACTAGATGAAGGAAATACGGTTCCTTTCATCGCAAGGTATCGTAAAGAAGTAACCGGTGGATTAGATGAAGTAA
AAATTAAGTCAATTCAAGACAAATGGAATTATGTAGTTAACCTTTCTGAACGTAAGCAAGAAGTTCTACGAATCATTGAA
GAACAAGGAAAACTTACGAAAGAGCTAGAAAATGATATAAAAGCAGCTACGCAATTACAACGAGTAGAAGATTTATATCG
CCCGTATAAGCAAAAGCGCAGGACGAGAGCTACTATTGCGAAAGAAAAAGGATTAGAACCTTTGGCGCTTCTCGTTTGGT
CACAAGAGAAGGATATTGATTTACAAGAAGAGGCAAAGCAATATTTCTCTGAAGAACATGAATTACATACAACGGAGGAT
GTATTGCAAGGTATAAATGATATTATCGCAGAATGGATATCTGACGATGCCAAATACCGTGACTACATCCGTGATATTAC
CTTTAAGCGTGGACTCATTCAATCGGAAGTGAAAAAACAAGAGGACGATGAAAAAGGCATATATGAAATGTACTATTCAT
ATAGCGAAGCAGTGCGCTCATTAGTATCTCATCGTATTTTGGCATTGAACAGAGGGGAAAAAGAAAAAATACTAAAAGTA
CAAATTGAACCTCCTGTTGAACAAATTACATCCTATTTAGAGAAGCAAACGATTAAAAATAATAGTAATGAACAAATTAC
CAATTCTTTGAAAGCGGCAGTCGAGGATAGCTATAAACGACTTATCCAGCCATCTATCGAACGAGAGATTCGTAATGAAC
TCACAGAGAAAGCAGAAGCACAAGCTATTGAAGTGTTCTCTGTTAATCTGAAAAACCTATTATTACAGCCACCGTTAAAA
GGGAAAGTTGTCTTAAGCGTTGACCCTGCATTTAGAACGGGTTGTAAACTAGCTGTAGTAGACGAGACTGGAAAAGTTCA
TCATATTGGGGTGATCTATCCAACAGCTCCGAAAAATGATGTCAAAGGTGCAGAAAAAGTTGTTTTACAACTCATTGAAC
AGTTTAGTGTAGAATTAATAGCTATTGGAAATGGGACGGCTTCTCGTGAAACAGAGCAATTTATTTCCGATGTTATCCGA
AATAAAGAGTTAGATTTACCATATATTATTGTTAACGAAGCTGGTGCAAGTGTTTATTCCGCATCTCCTCTTGCTAGAGA
AGAGTTCCCAGATCTCCAAGTTGAAGAAAGAAGTGCGGTGTCTATTGCCAGGCGTGTACAGGATCCTTTAGCAGAACTTG
TAAAGATTGATCCGAAATCGATCGGAGTAGGTCAATACCAACATGATGTGAGTCAAAAAGAGTTATCCGGTTCGTTGTCA
TTCGTAGTAGAAACAGCGGTTAACCAAGTTGGTGTAAATGTAAATACTGCTTCTTCTTCATTATTGCAATATGTATCGGG
ATTAAGTAAAACAGTAGCGAATAATATGGTAAAGCAGCGTAATGAGGAAGGGAAATTTACGAACCGTAAGCAATTAAAGA
AAATACCAAGACTTGGAGCGAAAACCTATGAGCAAGCAATAGGGTTCTTGAGAATTCCTGATGGAGACACTATTCTTGAT
CGCACTCCAATTCACCCGGAAAGCTATGATCAAACAAAAAATCTACTACAAATGTTAGGCTATACAGAGAATGATATCGG
TAGTGAAAAGTTACAACAGGATCTAAATAATATAGATAAAAAAGCTACTGCTGAGAAATTAGAGATAGGGTTACCGACAT
TAGAAGATATAATGGAAGCTCTAGGGAAACCTGGAAGGGATCCACGTGATGACTTCCCTCAACCATTGTTAAAAAAGAAT
GTCATGAATATGGAAGATTTAAAATCAGGTATGGAACTACAAGGAACAGTGAGAAATGTAGTTGATTTTGGCGTATTTGT
TGATATTGGTGTTAAGCAAGATGGACTTGTGCATATTTCGAAGATGTCAAAGCAATTCGTTAAACATCCAATGGATATTG
CTTCAGTTGGAGATGTGGTGACAGTCTGGGTTGATCAAGTCGATGTACAAAAAGGTAGAATTGCCTTAACGATGGTTGGA
AATGATGGTAAATAA

Upstream 100 bases:

>100_bases
TGGGCTTTTGTTTTATTGGAACGGAAGTCATTACCTATCCAAATTAGGATTAAGGTGAAGTTTTTGATAAAATAGATAGT
ATATTCAAGGAGGAGTAGTA

Downstream 100 bases:

>100_bases
AAAGCATGGCTCTTAAAACAAGAGCCATGCTTTACTATTAATCAAGAATTATTTTACGCTTTCTGGAACTTGTAACCCAA
GACCTTGAGCTACGCGCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 724; Mature: 723

Protein sequence:

>724_residues
MSEIDKSLLKIVTNETGVATTTVEKVIALLDEGNTVPFIARYRKEVTGGLDEVKIKSIQDKWNYVVNLSERKQEVLRIIE
EQGKLTKELENDIKAATQLQRVEDLYRPYKQKRRTRATIAKEKGLEPLALLVWSQEKDIDLQEEAKQYFSEEHELHTTED
VLQGINDIIAEWISDDAKYRDYIRDITFKRGLIQSEVKKQEDDEKGIYEMYYSYSEAVRSLVSHRILALNRGEKEKILKV
QIEPPVEQITSYLEKQTIKNNSNEQITNSLKAAVEDSYKRLIQPSIEREIRNELTEKAEAQAIEVFSVNLKNLLLQPPLK
GKVVLSVDPAFRTGCKLAVVDETGKVHHIGVIYPTAPKNDVKGAEKVVLQLIEQFSVELIAIGNGTASRETEQFISDVIR
NKELDLPYIIVNEAGASVYSASPLAREEFPDLQVEERSAVSIARRVQDPLAELVKIDPKSIGVGQYQHDVSQKELSGSLS
FVVETAVNQVGVNVNTASSSLLQYVSGLSKTVANNMVKQRNEEGKFTNRKQLKKIPRLGAKTYEQAIGFLRIPDGDTILD
RTPIHPESYDQTKNLLQMLGYTENDIGSEKLQQDLNNIDKKATAEKLEIGLPTLEDIMEALGKPGRDPRDDFPQPLLKKN
VMNMEDLKSGMELQGTVRNVVDFGVFVDIGVKQDGLVHISKMSKQFVKHPMDIASVGDVVTVWVDQVDVQKGRIALTMVG
NDGK

Sequences:

>Translated_724_residues
MSEIDKSLLKIVTNETGVATTTVEKVIALLDEGNTVPFIARYRKEVTGGLDEVKIKSIQDKWNYVVNLSERKQEVLRIIE
EQGKLTKELENDIKAATQLQRVEDLYRPYKQKRRTRATIAKEKGLEPLALLVWSQEKDIDLQEEAKQYFSEEHELHTTED
VLQGINDIIAEWISDDAKYRDYIRDITFKRGLIQSEVKKQEDDEKGIYEMYYSYSEAVRSLVSHRILALNRGEKEKILKV
QIEPPVEQITSYLEKQTIKNNSNEQITNSLKAAVEDSYKRLIQPSIEREIRNELTEKAEAQAIEVFSVNLKNLLLQPPLK
GKVVLSVDPAFRTGCKLAVVDETGKVHHIGVIYPTAPKNDVKGAEKVVLQLIEQFSVELIAIGNGTASRETEQFISDVIR
NKELDLPYIIVNEAGASVYSASPLAREEFPDLQVEERSAVSIARRVQDPLAELVKIDPKSIGVGQYQHDVSQKELSGSLS
FVVETAVNQVGVNVNTASSSLLQYVSGLSKTVANNMVKQRNEEGKFTNRKQLKKIPRLGAKTYEQAIGFLRIPDGDTILD
RTPIHPESYDQTKNLLQMLGYTENDIGSEKLQQDLNNIDKKATAEKLEIGLPTLEDIMEALGKPGRDPRDDFPQPLLKKN
VMNMEDLKSGMELQGTVRNVVDFGVFVDIGVKQDGLVHISKMSKQFVKHPMDIASVGDVVTVWVDQVDVQKGRIALTMVG
NDGK
>Mature_723_residues
SEIDKSLLKIVTNETGVATTTVEKVIALLDEGNTVPFIARYRKEVTGGLDEVKIKSIQDKWNYVVNLSERKQEVLRIIEE
QGKLTKELENDIKAATQLQRVEDLYRPYKQKRRTRATIAKEKGLEPLALLVWSQEKDIDLQEEAKQYFSEEHELHTTEDV
LQGINDIIAEWISDDAKYRDYIRDITFKRGLIQSEVKKQEDDEKGIYEMYYSYSEAVRSLVSHRILALNRGEKEKILKVQ
IEPPVEQITSYLEKQTIKNNSNEQITNSLKAAVEDSYKRLIQPSIEREIRNELTEKAEAQAIEVFSVNLKNLLLQPPLKG
KVVLSVDPAFRTGCKLAVVDETGKVHHIGVIYPTAPKNDVKGAEKVVLQLIEQFSVELIAIGNGTASRETEQFISDVIRN
KELDLPYIIVNEAGASVYSASPLAREEFPDLQVEERSAVSIARRVQDPLAELVKIDPKSIGVGQYQHDVSQKELSGSLSF
VVETAVNQVGVNVNTASSSLLQYVSGLSKTVANNMVKQRNEEGKFTNRKQLKKIPRLGAKTYEQAIGFLRIPDGDTILDR
TPIHPESYDQTKNLLQMLGYTENDIGSEKLQQDLNNIDKKATAEKLEIGLPTLEDIMEALGKPGRDPRDDFPQPLLKKNV
MNMEDLKSGMELQGTVRNVVDFGVFVDIGVKQDGLVHISKMSKQFVKHPMDIASVGDVVTVWVDQVDVQKGRIALTMVGN
DGK

Specific function: Unknown

COG id: COG2183

COG function: function code K; Transcriptional accessory protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Homo sapiens, GI221136781, Length=792, Percent_Identity=33.9646464646465, Blast_Score=429, Evalue=1e-120,
Organism=Homo sapiens, GI27597090, Length=598, Percent_Identity=24.7491638795987, Blast_Score=89, Evalue=2e-17,
Organism=Escherichia coli, GI87082262, Length=729, Percent_Identity=44.9931412894376, Blast_Score=570, Evalue=1e-163,
Organism=Escherichia coli, GI1787140, Length=75, Percent_Identity=45.3333333333333, Blast_Score=74, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17511129, Length=754, Percent_Identity=30.5039787798408, Blast_Score=270, Evalue=3e-72,
Organism=Caenorhabditis elegans, GI17552892, Length=313, Percent_Identity=24.9201277955272, Blast_Score=75, Evalue=2e-13,
Organism=Drosophila melanogaster, GI62484314, Length=746, Percent_Identity=33.3780160857909, Blast_Score=392, Evalue=1e-109,
Organism=Drosophila melanogaster, GI24640080, Length=510, Percent_Identity=22.7450980392157, Blast_Score=81, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR022967
- InterPro:   IPR018974
- InterPro:   IPR023097 [H]

Pfam domain/function: PF00575 S1; PF09371 Tex_N [H]

EC number: NA

Molecular weight: Translated: 81511; Mature: 81380

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEIDKSLLKIVTNETGVATTTVEKVIALLDEGNTVPFIARYRKEVTGGLDEVKIKSIQD
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHH
KWNYVVNLSERKQEVLRIIEEQGKLTKELENDIKAATQLQRVEDLYRPYKQKRRTRATIA
HHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEKGLEPLALLVWSQEKDIDLQEEAKQYFSEEHELHTTEDVLQGINDIIAEWISDDAKYR
HHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHH
DYIRDITFKRGLIQSEVKKQEDDEKGIYEMYYSYSEAVRSLVSHRILALNRGEKEKILKV
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
QIEPPVEQITSYLEKQTIKNNSNEQITNSLKAAVEDSYKRLIQPSIEREIRNELTEKAEA
EECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
QAIEVFSVNLKNLLLQPPLKGKVVLSVDPAFRTGCKLAVVDETGKVHHIGVIYPTAPKND
HHHHHEEECHHHHHCCCCCCCCEEEEECHHHHCCCEEEEEECCCCEEEEEEEECCCCCCC
VKGAEKVVLQLIEQFSVELIAIGNGTASRETEQFISDVIRNKELDLPYIIVNEAGASVYS
CCHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCC
ASPLAREEFPDLQVEERSAVSIARRVQDPLAELVKIDPKSIGVGQYQHDVSQKELSGSLS
CCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHH
FVVETAVNQVGVNVNTASSSLLQYVSGLSKTVANNMVKQRNEEGKFTNRKQLKKIPRLGA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCH
KTYEQAIGFLRIPDGDTILDRTPIHPESYDQTKNLLQMLGYTENDIGSEKLQQDLNNIDK
HHHHHHCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
KATAEKLEIGLPTLEDIMEALGKPGRDPRDDFPQPLLKKNVMNMEDLKSGMELQGTVRNV
HHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCHHHHHCCCHHHHHHHHH
VDFGVFVDIGVKQDGLVHISKMSKQFVKHPMDIASVGDVVTVWVDQVDVQKGRIALTMVG
HHHHHEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHCCCCCCEEEEEEC
NDGK
CCCC
>Mature Secondary Structure 
SEIDKSLLKIVTNETGVATTTVEKVIALLDEGNTVPFIARYRKEVTGGLDEVKIKSIQD
CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHH
KWNYVVNLSERKQEVLRIIEEQGKLTKELENDIKAATQLQRVEDLYRPYKQKRRTRATIA
HHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEKGLEPLALLVWSQEKDIDLQEEAKQYFSEEHELHTTEDVLQGINDIIAEWISDDAKYR
HHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHH
DYIRDITFKRGLIQSEVKKQEDDEKGIYEMYYSYSEAVRSLVSHRILALNRGEKEKILKV
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
QIEPPVEQITSYLEKQTIKNNSNEQITNSLKAAVEDSYKRLIQPSIEREIRNELTEKAEA
EECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
QAIEVFSVNLKNLLLQPPLKGKVVLSVDPAFRTGCKLAVVDETGKVHHIGVIYPTAPKND
HHHHHEEECHHHHHCCCCCCCCEEEEECHHHHCCCEEEEEECCCCEEEEEEEECCCCCCC
VKGAEKVVLQLIEQFSVELIAIGNGTASRETEQFISDVIRNKELDLPYIIVNEAGASVYS
CCHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCC
ASPLAREEFPDLQVEERSAVSIARRVQDPLAELVKIDPKSIGVGQYQHDVSQKELSGSLS
CCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHH
FVVETAVNQVGVNVNTASSSLLQYVSGLSKTVANNMVKQRNEEGKFTNRKQLKKIPRLGA
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCH
KTYEQAIGFLRIPDGDTILDRTPIHPESYDQTKNLLQMLGYTENDIGSEKLQQDLNNIDK
HHHHHHCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
KATAEKLEIGLPTLEDIMEALGKPGRDPRDDFPQPLLKKNVMNMEDLKSGMELQGTVRNV
HHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCHHHHHCCCHHHHHHHHH
VDFGVFVDIGVKQDGLVHISKMSKQFVKHPMDIASVGDVVTVWVDQVDVQKGRIALTMVG
HHHHHEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHCCCCCCEEEEEEC
NDGK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]