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The map label for this gene is rsbT [H]

Identifier: 23098081

GI number: 23098081

Start: 653476

End: 653877

Strand: Direct

Name: rsbT [H]

Synonym: OB0626

Alternate gene names: 23098081

Gene position: 653476-653877 (Clockwise)

Preceding gene: 23098080

Following gene: 23098082

Centisome position: 18.0

GC content: 39.8

Gene sequence:

>402_bases
ATGGATCCACAATCCTGCGTGAATATAAAAAAAGAGTGGGATATTGTTGGGGCAAGACAACTTGGTCGTGAGATGGCAAA
GCAAGTAGGTTTCGGAACGGTTGACCAGGCGAGAGTTGCAACAGCAATATCAGAATTAGCTCGTAACATATACTTATACG
CTGAGCACGGTAAGATTTGTTTTGAAGTTATTAAAGGTGAAAAGAAACAAGGTTTATGCATGATTGCTTTAGATAACGGA
CCTGGAATAAGTGATATTAGTCGTGCTATGCAAGATGGTTATACTACTTCCGGAGGGTTAGGAGCAGGACTCCCAGGTGT
GAAAAGGTTAATGGATGACTTTGATATTGAATCCGAAATAGGAAAAGGTACAAGAATAAAAGCTGTGAAGTGGATAAGAT
AA

Upstream 100 bases:

>100_bases
TGACTTTAATTGATTTAGGTATCCATATGCAAAATGTCCCAACAGCATTAGATTTAGAACAAGGATTAGTTAAGCTTCAA
CAGGAACTGGAGGTATAATG

Downstream 100 bases:

>100_bases
AGATAGCCTACATCACAGTAAAAACTAGTATAATTTTCCTCTAATTATAAATTACGGGGGATAATCAAATGGAAAAGACG
ATAAAAAATAATACAAAAAG

Product: positive regulator of sigma-B activity

Products: NA

Alternate protein names: Anti-sigma-B factor rsbT; Switch protein/serine kinase [H]

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MDPQSCVNIKKEWDIVGARQLGREMAKQVGFGTVDQARVATAISELARNIYLYAEHGKICFEVIKGEKKQGLCMIALDNG
PGISDISRAMQDGYTTSGGLGAGLPGVKRLMDDFDIESEIGKGTRIKAVKWIR

Sequences:

>Translated_133_residues
MDPQSCVNIKKEWDIVGARQLGREMAKQVGFGTVDQARVATAISELARNIYLYAEHGKICFEVIKGEKKQGLCMIALDNG
PGISDISRAMQDGYTTSGGLGAGLPGVKRLMDDFDIESEIGKGTRIKAVKWIR
>Mature_133_residues
MDPQSCVNIKKEWDIVGARQLGREMAKQVGFGTVDQARVATAISELARNIYLYAEHGKICFEVIKGEKKQGLCMIALDNG
PGISDISRAMQDGYTTSGGLGAGLPGVKRLMDDFDIESEIGKGTRIKAVKWIR

Specific function: Provides the crucial link between the upstream module (communication of environmental stress) and the downstream module (integration of the environmental signals with signals of energy stress) that compose the signal transduction pathway controlling the s

COG id: COG2172

COG function: function code T; Anti-sigma regulatory factor (Ser/Thr protein kinase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594 [H]

Pfam domain/function: PF02518 HATPase_c [H]

EC number: =2.7.11.1 [H]

Molecular weight: Translated: 14504; Mature: 14504

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPQSCVNIKKEWDIVGARQLGREMAKQVGFGTVDQARVATAISELARNIYLYAEHGKIC
CCCHHHHCCHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEEECCCHHH
FEVIKGEKKQGLCMIALDNGPGISDISRAMQDGYTTSGGLGAGLPGVKRLMDDFDIESEI
HHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHC
GKGTRIKAVKWIR
CCCCEEEEEECCC
>Mature Secondary Structure
MDPQSCVNIKKEWDIVGARQLGREMAKQVGFGTVDQARVATAISELARNIYLYAEHGKIC
CCCHHHHCCHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEEEECCCHHH
FEVIKGEKKQGLCMIALDNGPGISDISRAMQDGYTTSGGLGAGLPGVKRLMDDFDIESEI
HHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHC
GKGTRIKAVKWIR
CCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8002610; 9384377; 8002609; 8824586; 9786195 [H]