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The map label for this gene is ykoJ [H]

Identifier: 23098052

GI number: 23098052

Start: 624298

End: 624882

Strand: Direct

Name: ykoJ [H]

Synonym: OB0597

Alternate gene names: 23098052

Gene position: 624298-624882 (Clockwise)

Preceding gene: 23098051

Following gene: 23098058

Centisome position: 17.2

GC content: 34.87

Gene sequence:

>585_bases
ATGAAAAAGAAATTGGCAGTACTAGTAGGAGCATTAACAATATCAACAGCGATTGGGGTAGGGTTTTCACAATCGGATCA
AGCAGCTTCAGCTTCGGAAAATAACAAACAGCCAACGTTATCTTCGGAGGATATCACTTCTATCGTTAATGAACAGTATG
AGGGTGATATTACTGATTTTGAATTAGACAGAGATGACAATCAAACTCATTACGAAGTAGAGGTAATCAATGACGACGAA
GAATATGACTTGGAAATTGATGCAGAAACAGGAGAAATTATTAAAGAAAACGTAGAGAAATTTCAACTAGAAAATAAACA
GGGGACTAAAAATTCTAACGTGGATAGCTCAAACTTCATTGGTGATAAAAAAGCAAAAGAAATTGCTTTAGAACAATTTT
CTGGTAAAGTTGTAGAATTTGAGTTAGATGAAGATGATGGTAAGTATGTATATGAAATCGAAGTAAGAGACGGAAATAAA
GAAGCAGATTTTGAAATTGACGCGGTAACAGGAAATGTGTTGGAAATGGATATAGAAACTGACGACGATGATGACGATGA
CGATGACGATCGTTATGATGATTAA

Upstream 100 bases:

>100_bases
ACCTTTCTATAAATTCTCATGAATTTCTAATCTTTATCAAAGAGTCTTATAATCCTTGTTGGATATGATGTAGTTAACAA
CAAAAAGGAGGTAATTTTAA

Downstream 100 bases:

>100_bases
TTAAAATTCCTGAAATACGGTGAATAATATAAAAGTAGTCTTCTAAAATAGATCATAATGTAAAAGGGATTGGGGCAAAA
GTATTCAGGAAAAAGACAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MKKKLAVLVGALTISTAIGVGFSQSDQAASASENNKQPTLSSEDITSIVNEQYEGDITDFELDRDDNQTHYEVEVINDDE
EYDLEIDAETGEIIKENVEKFQLENKQGTKNSNVDSSNFIGDKKAKEIALEQFSGKVVEFELDEDDGKYVYEIEVRDGNK
EADFEIDAVTGNVLEMDIETDDDDDDDDDDRYDD

Sequences:

>Translated_194_residues
MKKKLAVLVGALTISTAIGVGFSQSDQAASASENNKQPTLSSEDITSIVNEQYEGDITDFELDRDDNQTHYEVEVINDDE
EYDLEIDAETGEIIKENVEKFQLENKQGTKNSNVDSSNFIGDKKAKEIALEQFSGKVVEFELDEDDGKYVYEIEVRDGNK
EADFEIDAVTGNVLEMDIETDDDDDDDDDDRYDD
>Mature_194_residues
MKKKLAVLVGALTISTAIGVGFSQSDQAASASENNKQPTLSSEDITSIVNEQYEGDITDFELDRDDNQTHYEVEVINDDE
EYDLEIDAETGEIIKENVEKFQLENKQGTKNSNVDSSNFIGDKKAKEIALEQFSGKVVEFELDEDDGKYVYEIEVRDGNK
EADFEIDAVTGNVLEMDIETDDDDDDDDDDRYDD

Specific function: Unknown

COG id: COG3212

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005075 [H]

Pfam domain/function: PF03413 PepSY [H]

EC number: NA

Molecular weight: Translated: 21790; Mature: 21790

Theoretical pI: Translated: 3.65; Mature: 3.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKLAVLVGALTISTAIGVGFSQSDQAASASENNKQPTLSSEDITSIVNEQYEGDITDF
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEE
ELDRDDNQTHYEVEVINDDEEYDLEIDAETGEIIKENVEKFQLENKQGTKNSNVDSSNFI
EECCCCCCEEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCC
GDKKAKEIALEQFSGKVVEFELDEDDGKYVYEIEVRDGNKEADFEIDAVTGNVLEMDIET
CCHHHHHHHHHHHCCEEEEEEECCCCCCEEEEEEECCCCCCCCEEEEEEECCEEEEEECC
DDDDDDDDDDRYDD
CCCCCCCCCCCCCC
>Mature Secondary Structure
MKKKLAVLVGALTISTAIGVGFSQSDQAASASENNKQPTLSSEDITSIVNEQYEGDITDF
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEE
ELDRDDNQTHYEVEVINDDEEYDLEIDAETGEIIKENVEKFQLENKQGTKNSNVDSSNFI
EECCCCCCEEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCC
GDKKAKEIALEQFSGKVVEFELDEDDGKYVYEIEVRDGNKEADFEIDAVTGNVLEMDIET
CCHHHHHHHHHHHCCEEEEEEECCCCCCEEEEEEECCCCCCCCEEEEEEECCEEEEEECC
DDDDDDDDDDRYDD
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]