Click here to switch to the map view.

The map label for this gene is ybaR [H]

Identifier: 23097819

GI number: 23097819

Start: 386790

End: 388241

Strand: Reverse

Name: ybaR [H]

Synonym: OB0364

Alternate gene names: 23097819

Gene position: 388241-386790 (Counterclockwise)

Preceding gene: 23097835

Following gene: 28563905

Centisome position: 10.69

GC content: 36.91

Gene sequence:

>1452_bases
ATGGAACAAACATGGAAGGAACAGTGGTTTGGAAACATCAAAGGAGATATATTAGCTGGTGTCGTTGTCGCACTCGCTTT
AATACCAGAAGCGATTGCTTTTTCTATTATTGCAGGTGTAGATCCAATGGTTGGTCTTTATGCATCTTTTTGTATTGCTG
TGGTAATTTCATTTGTTGGTGGACGCCCTGGAATGATTTCTGCAGCAACTGGTGCAATGGCATTAGTAATGGTAACTTTA
GTAGCTAATCACGGAATTGAATATTTGTTAGCAGCTACAATTTTAACGGGAGTTCTTCAAATCTTATTTGGCATTTTTAA
ATTAGCACGCTTTATGAAGTTTGTCCCTAGAACTGTCATGACAGGATTTGTTAATGCGTTAGCAATCCTTATTTTCACAT
CGCAATTACAGCATTTTGTAGGCGAAACTTGGATGATGTATGCTTTAGTAGCTTTAACTCTAGCAATAATCTACATCTTC
CCTCGAATAACGAAAGCTGTGCCATCTACTTTAGTGGCAATTATTGTTGTTACAATTATGGTATTAACAATGAATATAGG
TGTACGAAATGTTGGTGATATGGGAGAGTTAACACAGACTTTACCTATGTTTGCTCTACCTAATATTCCTCTTAACCTTG
AAACTTTAATGATTATCTTTCCATATGCACTCGCTTTATCAATTGTCGGTATTTTAGAATCATTACTAACCGCCAATATT
ATCGATGATATGACAGATACGGAAAGTAATAAAAACAGAGAAACGCGAGGACAAGGAATTGCTAACATTGTAGCAGGTTG
CTTCGGAGGTATGGCTGGATGTGCTATGATCGGACAATCCGTTATTAATGTCAAGTCTGGTGGAAGAGGACGACTCTCTG
CATTCGTTGCTGGTTTGTTCTTAATGTTCCTTATTTTGATTTTAGGTGATATCGTTGTTCAAATTCCGATGGCAGCTTTA
GCGGGAGTAATGATTATGGTATCAATAAGTACTTTTGATTGGAAATCAGTATTACACATTCACCGAATTCCTCGTACCGA
TGCTATAGTAATGATTGTTACTGTTGGTACAGTCGTATTAACTCATAACCTTGCTTATGGAGTTCTTGCAGGGGTGCTTT
TCAGTATGATATTCTTTGCTGCAAAAAATTCAAAGGTAAAAGTAAGTACAACAGTAAGTTATGATACACGTTATTATAAA
GTACAGGGACCGCTATTCTTTGCATCTGTTACCGATTTATTATCCCAAATTGATTTTCATGACCATAGAAGTAATGTAGA
AATTGACCTAAGTAGATCGCATATATGGGATGATTCTGCAGTGGGAGCTCTAGACAAGATTAAAACAAAGTTTGAGGATA
ACGATATTACCGTGCGATTTAAAGGAATGAATAAAGAGAGTACGCAGCTTGTCCAGTCGATGGAAAAACTCTCGAATAAT
TCCATGCACTAG

Upstream 100 bases:

>100_bases
TATGTTAAATAATATCTTGTACATTGTTTCTATTTGTTATAAATTATTATGGTGTTTATTTTTGAATTATTTATTTTAAT
AGATTGAAAGAGGTATAATT

Downstream 100 bases:

>100_bases
CATAGAAAAACGCATATCCTTTTAGTCGGATATGCGTTTTAGTTATAACATCTTCTCGTAGCGGCAGTGTTCGTGGTTAG
TGCCTTTATAATCATAACCA

Product: sulfate permease

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 483; Mature: 483

Protein sequence:

>483_residues
MEQTWKEQWFGNIKGDILAGVVVALALIPEAIAFSIIAGVDPMVGLYASFCIAVVISFVGGRPGMISAATGAMALVMVTL
VANHGIEYLLAATILTGVLQILFGIFKLARFMKFVPRTVMTGFVNALAILIFTSQLQHFVGETWMMYALVALTLAIIYIF
PRITKAVPSTLVAIIVVTIMVLTMNIGVRNVGDMGELTQTLPMFALPNIPLNLETLMIIFPYALALSIVGILESLLTANI
IDDMTDTESNKNRETRGQGIANIVAGCFGGMAGCAMIGQSVINVKSGGRGRLSAFVAGLFLMFLILILGDIVVQIPMAAL
AGVMIMVSISTFDWKSVLHIHRIPRTDAIVMIVTVGTVVLTHNLAYGVLAGVLFSMIFFAAKNSKVKVSTTVSYDTRYYK
VQGPLFFASVTDLLSQIDFHDHRSNVEIDLSRSHIWDDSAVGALDKIKTKFEDNDITVRFKGMNKESTQLVQSMEKLSNN
SMH

Sequences:

>Translated_483_residues
MEQTWKEQWFGNIKGDILAGVVVALALIPEAIAFSIIAGVDPMVGLYASFCIAVVISFVGGRPGMISAATGAMALVMVTL
VANHGIEYLLAATILTGVLQILFGIFKLARFMKFVPRTVMTGFVNALAILIFTSQLQHFVGETWMMYALVALTLAIIYIF
PRITKAVPSTLVAIIVVTIMVLTMNIGVRNVGDMGELTQTLPMFALPNIPLNLETLMIIFPYALALSIVGILESLLTANI
IDDMTDTESNKNRETRGQGIANIVAGCFGGMAGCAMIGQSVINVKSGGRGRLSAFVAGLFLMFLILILGDIVVQIPMAAL
AGVMIMVSISTFDWKSVLHIHRIPRTDAIVMIVTVGTVVLTHNLAYGVLAGVLFSMIFFAAKNSKVKVSTTVSYDTRYYK
VQGPLFFASVTDLLSQIDFHDHRSNVEIDLSRSHIWDDSAVGALDKIKTKFEDNDITVRFKGMNKESTQLVQSMEKLSNN
SMH
>Mature_483_residues
MEQTWKEQWFGNIKGDILAGVVVALALIPEAIAFSIIAGVDPMVGLYASFCIAVVISFVGGRPGMISAATGAMALVMVTL
VANHGIEYLLAATILTGVLQILFGIFKLARFMKFVPRTVMTGFVNALAILIFTSQLQHFVGETWMMYALVALTLAIIYIF
PRITKAVPSTLVAIIVVTIMVLTMNIGVRNVGDMGELTQTLPMFALPNIPLNLETLMIIFPYALALSIVGILESLLTANI
IDDMTDTESNKNRETRGQGIANIVAGCFGGMAGCAMIGQSVINVKSGGRGRLSAFVAGLFLMFLILILGDIVVQIPMAAL
AGVMIMVSISTFDWKSVLHIHRIPRTDAIVMIVTVGTVVLTHNLAYGVLAGVLFSMIFFAAKNSKVKVSTTVSYDTRYYK
VQGPLFFASVTDLLSQIDFHDHRSNVEIDLSRSHIWDDSAVGALDKIKTKFEDNDITVRFKGMNKESTQLVQSMEKLSNN
SMH

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Homo sapiens, GI45827800, Length=473, Percent_Identity=22.4101479915433, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI39752683, Length=473, Percent_Identity=22.4101479915433, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI45827802, Length=426, Percent_Identity=22.0657276995305, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI94721259, Length=477, Percent_Identity=20.9643605870021, Blast_Score=83, Evalue=5e-16,
Organism=Homo sapiens, GI94721255, Length=477, Percent_Identity=20.9643605870021, Blast_Score=83, Evalue=7e-16,
Organism=Homo sapiens, GI94721253, Length=477, Percent_Identity=20.9643605870021, Blast_Score=82, Evalue=8e-16,
Organism=Homo sapiens, GI94721257, Length=476, Percent_Identity=21.0084033613445, Blast_Score=82, Evalue=8e-16,
Organism=Homo sapiens, GI269784651, Length=361, Percent_Identity=21.606648199446, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI16418457, Length=373, Percent_Identity=22.7882037533512, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI301601599, Length=373, Percent_Identity=22.7882037533512, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI47131207, Length=504, Percent_Identity=22.6190476190476, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI20336272, Length=504, Percent_Identity=22.6190476190476, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI262206105, Length=138, Percent_Identity=30.4347826086957, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI262206075, Length=138, Percent_Identity=30.4347826086957, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI262206069, Length=138, Percent_Identity=30.4347826086957, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI262206063, Length=138, Percent_Identity=30.4347826086957, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI100913030, Length=460, Percent_Identity=22.1739130434783, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI16306483, Length=383, Percent_Identity=20.88772845953, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI20336282, Length=383, Percent_Identity=20.88772845953, Blast_Score=67, Evalue=4e-11,
Organism=Escherichia coli, GI87081859, Length=500, Percent_Identity=27.2, Blast_Score=156, Evalue=3e-39,
Organism=Caenorhabditis elegans, GI17566848, Length=477, Percent_Identity=23.0607966457023, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI86565215, Length=564, Percent_Identity=20.3900709219858, Blast_Score=81, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6325260, Length=444, Percent_Identity=20.9459459459459, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24649801, Length=515, Percent_Identity=23.495145631068, Blast_Score=96, Evalue=5e-20,
Organism=Drosophila melanogaster, GI24651449, Length=437, Percent_Identity=25.629290617849, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI85815873, Length=417, Percent_Identity=24.9400479616307, Blast_Score=90, Evalue=4e-18,
Organism=Drosophila melanogaster, GI21358229, Length=138, Percent_Identity=36.9565217391304, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI19922482, Length=455, Percent_Identity=22.8571428571429, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI21358633, Length=500, Percent_Identity=21.8, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI21355087, Length=136, Percent_Identity=26.4705882352941, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24647160, Length=136, Percent_Identity=26.4705882352941, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018045
- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 52460; Mature: 52460

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: PS50801 STAS ; PS01130 SLC26A

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQTWKEQWFGNIKGDILAGVVVALALIPEAIAFSIIAGVDPMVGLYASFCIAVVISFVG
CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
GRPGMISAATGAMALVMVTLVANHGIEYLLAATILTGVLQILFGIFKLARFMKFVPRTVM
CCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGFVNALAILIFTSQLQHFVGETWMMYALVALTLAIIYIFPRITKAVPSTLVAIIVVTIM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLTMNIGVRNVGDMGELTQTLPMFALPNIPLNLETLMIIFPYALALSIVGILESLLTANI
HHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDDMTDTESNKNRETRGQGIANIVAGCFGGMAGCAMIGQSVINVKSGGRGRLSAFVAGLF
HHHHCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LMFLILILGDIVVQIPMAALAGVMIMVSISTFDWKSVLHIHRIPRTDAIVMIVTVGTVVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHCCCCCCCEEEHHHHHHHHH
THNLAYGVLAGVLFSMIFFAAKNSKVKVSTTVSYDTRYYKVQGPLFFASVTDLLSQIDFH
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCEEEEEECCCHHHHHHHHHHHCCCC
DHRSNVEIDLSRSHIWDDSAVGALDKIKTKFEDNDITVRFKGMNKESTQLVQSMEKLSNN
CCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCC
SMH
CCC
>Mature Secondary Structure
MEQTWKEQWFGNIKGDILAGVVVALALIPEAIAFSIIAGVDPMVGLYASFCIAVVISFVG
CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
GRPGMISAATGAMALVMVTLVANHGIEYLLAATILTGVLQILFGIFKLARFMKFVPRTVM
CCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGFVNALAILIFTSQLQHFVGETWMMYALVALTLAIIYIFPRITKAVPSTLVAIIVVTIM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLTMNIGVRNVGDMGELTQTLPMFALPNIPLNLETLMIIFPYALALSIVGILESLLTANI
HHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDDMTDTESNKNRETRGQGIANIVAGCFGGMAGCAMIGQSVINVKSGGRGRLSAFVAGLF
HHHHCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LMFLILILGDIVVQIPMAALAGVMIMVSISTFDWKSVLHIHRIPRTDAIVMIVTVGTVVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHCCCCCCCEEEHHHHHHHHH
THNLAYGVLAGVLFSMIFFAAKNSKVKVSTTVSYDTRYYKVQGPLFFASVTDLLSQIDFH
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCEEEEEECCCHHHHHHHHHHHCCCC
DHRSNVEIDLSRSHIWDDSAVGALDKIKTKFEDNDITVRFKGMNKESTQLVQSMEKLSNN
CCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCC
SMH
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9274029; 9384377 [H]