| Definition | Oceanobacillus iheyensis HTE831, complete genome. |
|---|---|
| Accession | NC_004193 |
| Length | 3,630,528 |
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The map label for this gene is nprA [H]
Identifier: 23097805
GI number: 23097805
Start: 370802
End: 372088
Strand: Reverse
Name: nprA [H]
Synonym: OB0350
Alternate gene names: 23097805
Gene position: 372088-370802 (Counterclockwise)
Preceding gene: 23097809
Following gene: 23097801
Centisome position: 10.25
GC content: 31.16
Gene sequence:
>1287_bases ATGAATAATATTGGGGATATCATTAAACTAGAACGACTAAAGCAGCAAATTAAACAAACTCAATTAGCAAAAGGTATTTG TTCCACATCCTATTTAAGTAAAATTGAAAACAATACAACTACAGCAAGTGATGAGGTTATTAACCTCTTACTACAGAAAT TGAATATTGAGCTTTCTGACCAAGAAAAAAATGAAGAGGCTTTTATTGAAGAAATACGCGCTATTTCTAAACGAGCTCGC ATATATCGAGAATCTAAATTTATCGAAGAAAAAATAAATGAATTGCAATACATGAAAAATATCTACCGTAAAACGACATT TTTAGAACTGCAATTATTAATTTTTCGATTAACACTTTTCTTTGAAGATAAAGAGCGTAGTACTTTTTATCTAGATTACT TAGAACAAGAAAAAGAAAACTTTACACCAAACCAACAGTTTTTATTTTTACAATGCAAAGCAATTTTCCATCATACGTAT GCAGATATTCATCAGGCATTAACGTATTTTAAAGAGGCTTTAGTAATTTCAGATGATATCGTATTAGAAGGTTGGGAGAG AGCTGATCATCAATACATGCTTGCTATTGCATATAATTCCTGTGATGAAGTAATTAATACCATAGAATACGGGAAACTTT CCTTAAAGTATTTTCAACGTGCCTTCATTATCAATCGAACCATTGATTGTTATCTACTAATTGGTATTGCTTATAAGAAG GGAAATAACCTTGAAGAAGCACTTAAATCTTATGAGCTAGCTTTAAAAATGACAAATGAAACTCGAATGTTAGAAGAAGT TGAACTCTTAAAAGGAGTAATTTATCAAAATCTCGGTTCATTAAGTTCTCATTTACAACCAGAAAAAGTCATTCCATATT ATAAAAAAAGCTTATCCTATAAACAAAAAGCAAACAACAAACTGGTTACGATATTCTCTATCGTAATTGAATATGCAAAA TATGAGCAATGGGATAAGGTTACTTATTGGATAGATCAGGGATTTGCCGTGATAAAAAGCGCACCGGAAGCTCATCCTAA ATACACGCATCATTTAAAAGTGTATCAAGATCTTGCCGATTATCAATATATAACGGAAGAGGTAGGTGTCGCTGCAATTA ATTACTTTGATGGAATACAAGACCTCAGACATTGTCTAAAATATTCCGGATGGCTTGCTAATGGATTCAAAGCAAGAGGA AAGTATAAACTCGCTTCTATATACTTTCAAATGTCTCAAAAATATCTGTTAAAACGTATGAACATTGAATATATTGGTGA CTTATAG
Upstream 100 bases:
>100_bases GTTCAATTATAGTATTACCGTTAAACTAATAATAACAGACAATTCTAATTAATATACAAAAATAATCATACTATAGATAC GGGCAAGGTGGGGGAGAAAT
Downstream 100 bases:
>100_bases CTTGTACATAAAAAAGAGTAAACATGTGAGTGGGGGGAAGCTTTTATGCTAATACCACATGTTTACTTTTTCTACTTTAA TCATATCATTGATAATATTA
Product: transcriptional activator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MNNIGDIIKLERLKQQIKQTQLAKGICSTSYLSKIENNTTTASDEVINLLLQKLNIELSDQEKNEEAFIEEIRAISKRAR IYRESKFIEEKINELQYMKNIYRKTTFLELQLLIFRLTLFFEDKERSTFYLDYLEQEKENFTPNQQFLFLQCKAIFHHTY ADIHQALTYFKEALVISDDIVLEGWERADHQYMLAIAYNSCDEVINTIEYGKLSLKYFQRAFIINRTIDCYLLIGIAYKK GNNLEEALKSYELALKMTNETRMLEEVELLKGVIYQNLGSLSSHLQPEKVIPYYKKSLSYKQKANNKLVTIFSIVIEYAK YEQWDKVTYWIDQGFAVIKSAPEAHPKYTHHLKVYQDLADYQYITEEVGVAAINYFDGIQDLRHCLKYSGWLANGFKARG KYKLASIYFQMSQKYLLKRMNIEYIGDL
Sequences:
>Translated_428_residues MNNIGDIIKLERLKQQIKQTQLAKGICSTSYLSKIENNTTTASDEVINLLLQKLNIELSDQEKNEEAFIEEIRAISKRAR IYRESKFIEEKINELQYMKNIYRKTTFLELQLLIFRLTLFFEDKERSTFYLDYLEQEKENFTPNQQFLFLQCKAIFHHTY ADIHQALTYFKEALVISDDIVLEGWERADHQYMLAIAYNSCDEVINTIEYGKLSLKYFQRAFIINRTIDCYLLIGIAYKK GNNLEEALKSYELALKMTNETRMLEEVELLKGVIYQNLGSLSSHLQPEKVIPYYKKSLSYKQKANNKLVTIFSIVIEYAK YEQWDKVTYWIDQGFAVIKSAPEAHPKYTHHLKVYQDLADYQYITEEVGVAAINYFDGIQDLRHCLKYSGWLANGFKARG KYKLASIYFQMSQKYLLKRMNIEYIGDL >Mature_428_residues MNNIGDIIKLERLKQQIKQTQLAKGICSTSYLSKIENNTTTASDEVINLLLQKLNIELSDQEKNEEAFIEEIRAISKRAR IYRESKFIEEKINELQYMKNIYRKTTFLELQLLIFRLTLFFEDKERSTFYLDYLEQEKENFTPNQQFLFLQCKAIFHHTY ADIHQALTYFKEALVISDDIVLEGWERADHQYMLAIAYNSCDEVINTIEYGKLSLKYFQRAFIINRTIDCYLLIGIAYKK GNNLEEALKSYELALKMTNETRMLEEVELLKGVIYQNLGSLSSHLQPEKVIPYYKKSLSYKQKANNKLVTIFSIVIEYAK YEQWDKVTYWIDQGFAVIKSAPEAHPKYTHHLKVYQDLADYQYITEEVGVAAINYFDGIQDLRHCLKYSGWLANGFKARG KYKLASIYFQMSQKYLLKRMNIEYIGDL
Specific function: Activates the transcription of nprS by about five fold. May bind to the upstream region of nprS promoter [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 4 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001387 - InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF01381 HTH_3; PF00515 TPR_1 [H]
EC number: NA
Molecular weight: Translated: 50496; Mature: 50496
Theoretical pI: Translated: 7.26; Mature: 7.26
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION ; PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNIGDIIKLERLKQQIKQTQLAKGICSTSYLSKIENNTTTASDEVINLLLQKLNIELSD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC QEKNEEAFIEEIRAISKRARIYRESKFIEEKINELQYMKNIYRKTTFLELQLLIFRLTLF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FEDKERSTFYLDYLEQEKENFTPNQQFLFLQCKAIFHHTYADIHQALTYFKEALVISDDI EECCCCCEEEHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VLEGWERADHQYMLAIAYNSCDEVINTIEYGKLSLKYFQRAFIINRTIDCYLLIGIAYKK EECCCCCCCCEEEEEEEHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEEEEEEEEECC GNNLEEALKSYELALKMTNETRMLEEVELLKGVIYQNLGSLSSHLQPEKVIPYYKKSLSY CCCHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCH KQKANNKLVTIFSIVIEYAKYEQWDKVTYWIDQGFAVIKSAPEAHPKYTHHLKVYQDLAD HHHCCCCHHHHHHHHHHHHHHHCHHHEEEEHHCCHHHHHCCCCCCCCHHHHHHHHHHHHH YQYITEEVGVAAINYFDGIQDLRHCLKYSGWLANGFKARGKYKLASIYFQMSQKYLLKRM HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHC NIEYIGDL CCHHCCCC >Mature Secondary Structure MNNIGDIIKLERLKQQIKQTQLAKGICSTSYLSKIENNTTTASDEVINLLLQKLNIELSD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCC QEKNEEAFIEEIRAISKRARIYRESKFIEEKINELQYMKNIYRKTTFLELQLLIFRLTLF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FEDKERSTFYLDYLEQEKENFTPNQQFLFLQCKAIFHHTYADIHQALTYFKEALVISDDI EECCCCCEEEHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VLEGWERADHQYMLAIAYNSCDEVINTIEYGKLSLKYFQRAFIINRTIDCYLLIGIAYKK EECCCCCCCCEEEEEEEHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEEEEEEEEECC GNNLEEALKSYELALKMTNETRMLEEVELLKGVIYQNLGSLSSHLQPEKVIPYYKKSLSY CCCHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCH KQKANNKLVTIFSIVIEYAKYEQWDKVTYWIDQGFAVIKSAPEAHPKYTHHLKVYQDLAD HHHCCCCHHHHHHHHHHHHHHHCHHHEEEEHHCCHHHHHCCCCCCCCHHHHHHHHHHHHH YQYITEEVGVAAINYFDGIQDLRHCLKYSGWLANGFKARGKYKLASIYFQMSQKYLLKRM HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHC NIEYIGDL CCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2203733 [H]