Click here to switch to the map view.

The map label for this gene is 23097783

Identifier: 23097783

GI number: 23097783

Start: 352608

End: 353255

Strand: Reverse

Name: 23097783

Synonym: OB0328

Alternate gene names: NA

Gene position: 353255-352608 (Counterclockwise)

Preceding gene: 23097785

Following gene: 23097782

Centisome position: 9.73

GC content: 32.1

Gene sequence:

>648_bases
ATGGACGTTTCCAATAAAACAGGTTTGAGAGAAAAAAATAAAAACAAGCGCTATCAAAGTATTGTTAAAACTGCAGAACG
ATTATTCGCCGAATCAGGTTTAGAAAGTATAAAGATGCAGAATATAGCTGACGAAGAAGGGATTGGCGTAGCGACATTAT
TTCGATACTTTCCGAGGAAAGATAAACTTATCGTTGCCGTTGCAACTTCCATTATGGAAGAAGAACTTTATCAGTTTCAA
TTAATTATCAATAACGGCGAAAATGCATATAAAAAAATTGAACAAATATTTAACTTCCTAAGTCAAATTGTTACACATGC
TTCTAAAAACTCTACAACGTTTATTGATGCATTTGAAAACTATGTTGCTATTTCTAAAGAACCCTTAGAAGATATAGGTT
TATACGATGCAGTTAGAGAAAAGATCTATATTTTAATGTCTACACTTATCCAAGAGGGATCAAGTGACGGTTCGATTCGT
AAGGATATAGATATTAAAGAAACAATGATATCTTTCATAAACAACTTTGGTTTATTTGCGCGTAAATTAGCATTAATGAA
AGCTGTTAACTATTATGATGTAGAGGTGGAGCCACGGCGTCAGTTAGAAATTATGAAAGAGCTATATTTATCACATATAA
AAGCTTAA

Upstream 100 bases:

>100_bases
GACTATCATTAATTAAATTGTATACGAATTCTGATATAATTGCAAAACAAATTGATTCCCTGTATAAATTAACTATAGAT
TTATCAAGAAGGAGATTGTT

Downstream 100 bases:

>100_bases
TTTGAAAGTTATACAGCGGGGTTTACAGAATGTACCTTCTTAAAAGGAATGGGGGAAATATATTGACAAGTTTTCAATCT
TCAGATCAACTAAACCACTT

Product: transcriptional regulator

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator; Transcriptional Regulator; Regulatory Protein TetR

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MDVSNKTGLREKNKNKRYQSIVKTAERLFAESGLESIKMQNIADEEGIGVATLFRYFPRKDKLIVAVATSIMEEELYQFQ
LIINNGENAYKKIEQIFNFLSQIVTHASKNSTTFIDAFENYVAISKEPLEDIGLYDAVREKIYILMSTLIQEGSSDGSIR
KDIDIKETMISFINNFGLFARKLALMKAVNYYDVEVEPRRQLEIMKELYLSHIKA

Sequences:

>Translated_215_residues
MDVSNKTGLREKNKNKRYQSIVKTAERLFAESGLESIKMQNIADEEGIGVATLFRYFPRKDKLIVAVATSIMEEELYQFQ
LIINNGENAYKKIEQIFNFLSQIVTHASKNSTTFIDAFENYVAISKEPLEDIGLYDAVREKIYILMSTLIQEGSSDGSIR
KDIDIKETMISFINNFGLFARKLALMKAVNYYDVEVEPRRQLEIMKELYLSHIKA
>Mature_215_residues
MDVSNKTGLREKNKNKRYQSIVKTAERLFAESGLESIKMQNIADEEGIGVATLFRYFPRKDKLIVAVATSIMEEELYQFQ
LIINNGENAYKKIEQIFNFLSQIVTHASKNSTTFIDAFENYVAISKEPLEDIGLYDAVREKIYILMSTLIQEGSSDGSIR
KDIDIKETMISFINNFGLFARKLALMKAVNYYDVEVEPRRQLEIMKELYLSHIKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24760; Mature: 24760

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVSNKTGLREKNKNKRYQSIVKTAERLFAESGLESIKMQNIADEEGIGVATLFRYFPRK
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC
DKLIVAVATSIMEEELYQFQLIINNGENAYKKIEQIFNFLSQIVTHASKNSTTFIDAFEN
CCCHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
YVAISKEPLEDIGLYDAVREKIYILMSTLIQEGSSDGSIRKDIDIKETMISFINNFGLFA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
RKLALMKAVNYYDVEVEPRRQLEIMKELYLSHIKA
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDVSNKTGLREKNKNKRYQSIVKTAERLFAESGLESIKMQNIADEEGIGVATLFRYFPRK
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC
DKLIVAVATSIMEEELYQFQLIINNGENAYKKIEQIFNFLSQIVTHASKNSTTFIDAFEN
CCCHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
YVAISKEPLEDIGLYDAVREKIYILMSTLIQEGSSDGSIRKDIDIKETMISFINNFGLFA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
RKLALMKAVNYYDVEVEPRRQLEIMKELYLSHIKA
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA