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The map label for this gene is yycB [H]

Identifier: 23097723

GI number: 23097723

Start: 300235

End: 301452

Strand: Direct

Name: yycB [H]

Synonym: OB0268

Alternate gene names: 23097723

Gene position: 300235-301452 (Clockwise)

Preceding gene: 23097720

Following gene: 23097724

Centisome position: 8.27

GC content: 37.36

Gene sequence:

>1218_bases
ATGGTAGAGACTCAAGAGCATCAAAAGAGCAACAATCAGCTTCAATTTGTACTGTTAGTTATCGGAATAATTGTTGTAGC
ATTTAATCTACGACCGGCTATAACATCGGTAGGTCCATTGATCAGTCTTATCCGAGAAGATATTGATATTTCAAATGGTT
TGGCAGGGTTATTAACGAGTTTGCCGTTGATAGCATTTGCAGTTATTTCACCAATGGTGCCGAACGTTGCTCATAAATTT
ACAAGAGAAAAAGTATTAATTTATGGACTTATTTTAATTATAATTGGAATGTCAGTCCGGTCTATTTCGGTATTTATTTT
ATTACTAATAGGAACATTAATCATTGGTACAGGGATAGCAATTTGTAATGTATTACTACCAAGTCTTATTAAGAGTCACT
TTCCTTTAAAAGTGGCGTTGATGACAAGCATCTATACTACAGTCATGAATATTTTTGCAGCAGCTGGCTCTGGTTTAAGT
AATCCCCTTGCGAAAGATCTAAACTTAGGTTGGGAGATTTCTTTACTTATTTGGGCACTACCTGCTGTATTTGCTGTTCT
AATTTGGGTAGTTATCATAAGAAAAGATACAACAAAGCAAGAAACTATCACACCTTCTAAAAAGGGAATTCTTTCAGGTA
ATCGTATGTGGAGAATTCCACTTGCATGGATTGTTGCATCATTTTTAGGTCTACAATCAACGCTTTTTTACGTTACGATT
TCTTGGCTTCCAGAAATTCTGCATGATTTTGGTATGAGTATGGCGACTGCCGGATGGCTCCTCTCTATTACACAAATTAT
CGGGTTACCAGCGAGCTTTGCCATTCCAATCTTGGCAGGTAAGTTACAAAAGCAATCCTTTATTGCTTGTTCGATTGGTA
TACTCTCATTGATTGGCTACGGTGGATTGCTATTAGGAGATTCATGGGCAACGATAATATTCAGTTTGATTTTCATTGGA
ATTGCATTAGGCGGAGGATTTGCTTTGGCTTTAACTTTCATAGGTCTCCGGTCTAAGGATGCAGAACAAGCAACGGAGCT
TTCGGGAATGGCACAATCTGTCGGTTATTTATTTGCTGCTATAGGTCCATTTGCGATAGGTTCTATTTATGATGTTACTG
CGAGCTGGACGTTACCACTGTTAACATTGATGGTAGTAGCGGTGTTAATGATAATTACTGGATATCAAGTTGGTAAGGAT
AGGTATGTAATTGATTAA

Upstream 100 bases:

>100_bases
AAGCGCTTTTTTCCTTGTAAGAGAGGTTGCTATATTTATATATGAGGCGTATATTTAGTTGATAAAGAATGGTATTGCCT
AAGAAAGAAGGTTCATCATC

Downstream 100 bases:

>100_bases
GTTAATGGAGGGGGCTGTGTTTGTATTTCAGCATTTAATTGGAAGAAATGGTTGTTTTTATTACTGTTGATTTTCCTTGT
AGGAAGTTTCATCTTACTTA

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MVETQEHQKSNNQLQFVLLVIGIIVVAFNLRPAITSVGPLISLIREDIDISNGLAGLLTSLPLIAFAVISPMVPNVAHKF
TREKVLIYGLILIIIGMSVRSISVFILLLIGTLIIGTGIAICNVLLPSLIKSHFPLKVALMTSIYTTVMNIFAAAGSGLS
NPLAKDLNLGWEISLLIWALPAVFAVLIWVVIIRKDTTKQETITPSKKGILSGNRMWRIPLAWIVASFLGLQSTLFYVTI
SWLPEILHDFGMSMATAGWLLSITQIIGLPASFAIPILAGKLQKQSFIACSIGILSLIGYGGLLLGDSWATIIFSLIFIG
IALGGGFALALTFIGLRSKDAEQATELSGMAQSVGYLFAAIGPFAIGSIYDVTASWTLPLLTLMVVAVLMIITGYQVGKD
RYVID

Sequences:

>Translated_405_residues
MVETQEHQKSNNQLQFVLLVIGIIVVAFNLRPAITSVGPLISLIREDIDISNGLAGLLTSLPLIAFAVISPMVPNVAHKF
TREKVLIYGLILIIIGMSVRSISVFILLLIGTLIIGTGIAICNVLLPSLIKSHFPLKVALMTSIYTTVMNIFAAAGSGLS
NPLAKDLNLGWEISLLIWALPAVFAVLIWVVIIRKDTTKQETITPSKKGILSGNRMWRIPLAWIVASFLGLQSTLFYVTI
SWLPEILHDFGMSMATAGWLLSITQIIGLPASFAIPILAGKLQKQSFIACSIGILSLIGYGGLLLGDSWATIIFSLIFIG
IALGGGFALALTFIGLRSKDAEQATELSGMAQSVGYLFAAIGPFAIGSIYDVTASWTLPLLTLMVVAVLMIITGYQVGKD
RYVID
>Mature_405_residues
MVETQEHQKSNNQLQFVLLVIGIIVVAFNLRPAITSVGPLISLIREDIDISNGLAGLLTSLPLIAFAVISPMVPNVAHKF
TREKVLIYGLILIIIGMSVRSISVFILLLIGTLIIGTGIAICNVLLPSLIKSHFPLKVALMTSIYTTVMNIFAAAGSGLS
NPLAKDLNLGWEISLLIWALPAVFAVLIWVVIIRKDTTKQETITPSKKGILSGNRMWRIPLAWIVASFLGLQSTLFYVTI
SWLPEILHDFGMSMATAGWLLSITQIIGLPASFAIPILAGKLQKQSFIACSIGILSLIGYGGLLLGDSWATIIFSLIFIG
IALGGGFALALTFIGLRSKDAEQATELSGMAQSVGYLFAAIGPFAIGSIYDVTASWTLPLLTLMVVAVLMIITGYQVGKD
RYVID

Specific function: Unknown

COG id: COG2807

COG function: function code P; Cyanate permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Cyanate porter (TC 2.A.1.17) family [H]

Homologues:

Organism=Escherichia coli, GI1788092, Length=387, Percent_Identity=39.7932816537468, Blast_Score=230, Evalue=1e-61,
Organism=Escherichia coli, GI1786536, Length=374, Percent_Identity=24.331550802139, Blast_Score=94, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004747
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43540; Mature: 43540

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVETQEHQKSNNQLQFVLLVIGIIVVAFNLRPAITSVGPLISLIREDIDISNGLAGLLTS
CCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LPLIAFAVISPMVPNVAHKFTREKVLIYGLILIIIGMSVRSISVFILLLIGTLIIGTGIA
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ICNVLLPSLIKSHFPLKVALMTSIYTTVMNIFAAAGSGLSNPLAKDLNLGWEISLLIWAL
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHH
PAVFAVLIWVVIIRKDTTKQETITPSKKGILSGNRMWRIPLAWIVASFLGLQSTLFYVTI
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
SWLPEILHDFGMSMATAGWLLSITQIIGLPASFAIPILAGKLQKQSFIACSIGILSLIGY
HHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GGLLLGDSWATIIFSLIFIGIALGGGFALALTFIGLRSKDAEQATELSGMAQSVGYLFAA
CCCEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
IGPFAIGSIYDVTASWTLPLLTLMVVAVLMIITGYQVGKDRYVID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCC
>Mature Secondary Structure
MVETQEHQKSNNQLQFVLLVIGIIVVAFNLRPAITSVGPLISLIREDIDISNGLAGLLTS
CCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LPLIAFAVISPMVPNVAHKFTREKVLIYGLILIIIGMSVRSISVFILLLIGTLIIGTGIA
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ICNVLLPSLIKSHFPLKVALMTSIYTTVMNIFAAAGSGLSNPLAKDLNLGWEISLLIWAL
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHH
PAVFAVLIWVVIIRKDTTKQETITPSKKGILSGNRMWRIPLAWIVASFLGLQSTLFYVTI
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
SWLPEILHDFGMSMATAGWLLSITQIIGLPASFAIPILAGKLQKQSFIACSIGILSLIGY
HHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GGLLLGDSWATIIFSLIFIGIALGGGFALALTFIGLRSKDAEQATELSGMAQSVGYLFAA
CCCEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
IGPFAIGSIYDVTASWTLPLLTLMVVAVLMIITGYQVGKDRYVID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]