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The map label for this gene is gerD [H]

Identifier: 23097652

GI number: 23097652

Start: 211304

End: 211948

Strand: Reverse

Name: gerD [H]

Synonym: OB0197

Alternate gene names: 23097652

Gene position: 211948-211304 (Counterclockwise)

Preceding gene: 23097654

Following gene: 23097649

Centisome position: 5.84

GC content: 39.38

Gene sequence:

>645_bases
ATGGTACGACGACAACTATGTACTGTACTCCTTAGCTTATCCTTCTTCATAATTTTAACCGCTTGTGGAGGCGGTGGTGG
TAACAGCGAAAGCGAAGGTGAATACGATTCAACCAAAAAAATGGTTGTTGATATACTTCAAACCGAAGACGGTAAAAAAG
CGCTTCGAGAAATCATGCATGATGAAGAGCTTAAAAACTTATTAGTGATGGAATCAGACACCGTGAAAAATGCTGTTAAT
GAAGCACTTACTTCAGAAGAAAGCAAAAAATCCTGGGAAAAAATGTTCGAAGATCCGGAGTTCGTTAAGACATATGCGCA
ATCCATATCTGACGAACAAAAGAATTTAATGAAAGATCTCATGAACGACAGTCAATTTCAAAAACAGATGATTGAACTGC
TAAACAACCCGGAAGTTACCGAACAAATGCTATCGGTTGTGAAAAGCCAACAATTCCGTGCTCATTTAGAAGAAACGATC
CAACAAACCTTACAATCACCTATTTTCCAAGCCAAAATTGAGGAAATCCTACTCAAGGCTTCCCAAGAGCAAAGTAAATC
AAGTGGTTCTTCAAGTGAGTCCGGACAAGAAAGCCAATCTGGCGAATCGCAATCTGATTCAGGTAGTAGCGATTCAGGCA
ATTAA

Upstream 100 bases:

>100_bases
CCTCAATATTTTACCATGATACGGCATTTATTTCTCTTGTGTATGTGCATATTTTAATTATTTATCAAGCATATTAAGTA
TATAGAAAGGAGGATTATAA

Downstream 100 bases:

>100_bases
ACAAATATCCTATGGTTATACAAGAGAATAGGGTGCCCGAATAACCAGGACACCCTAATTCTTTATTCTTCCATTTTGGC
AATTACTTTAGCTGCTATCT

Product: spore germination protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MVRRQLCTVLLSLSFFIILTACGGGGGNSESEGEYDSTKKMVVDILQTEDGKKALREIMHDEELKNLLVMESDTVKNAVN
EALTSEESKKSWEKMFEDPEFVKTYAQSISDEQKNLMKDLMNDSQFQKQMIELLNNPEVTEQMLSVVKSQQFRAHLEETI
QQTLQSPIFQAKIEEILLKASQEQSKSSGSSSESGQESQSGESQSDSGSSDSGN

Sequences:

>Translated_214_residues
MVRRQLCTVLLSLSFFIILTACGGGGGNSESEGEYDSTKKMVVDILQTEDGKKALREIMHDEELKNLLVMESDTVKNAVN
EALTSEESKKSWEKMFEDPEFVKTYAQSISDEQKNLMKDLMNDSQFQKQMIELLNNPEVTEQMLSVVKSQQFRAHLEETI
QQTLQSPIFQAKIEEILLKASQEQSKSSGSSSESGQESQSGESQSDSGSSDSGN
>Mature_214_residues
MVRRQLCTVLLSLSFFIILTACGGGGGNSESEGEYDSTKKMVVDILQTEDGKKALREIMHDEELKNLLVMESDTVKNAVN
EALTSEESKKSWEKMFEDPEFVKTYAQSISDEQKNLMKDLMNDSQFQKQMIELLNNPEVTEQMLSVVKSQQFRAHLEETI
QQTLQSPIFQAKIEEILLKASQEQSKSSGSSSESGQESQSGESQSDSGSSDSGN

Specific function: May be involved in fructose recognition during germination [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23851; Mature: 23851

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRRQLCTVLLSLSFFIILTACGGGGGNSESEGEYDSTKKMVVDILQTEDGKKALREIMH
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
DEELKNLLVMESDTVKNAVNEALTSEESKKSWEKMFEDPEFVKTYAQSISDEQKNLMKDL
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
MNDSQFQKQMIELLNNPEVTEQMLSVVKSQQFRAHLEETIQQTLQSPIFQAKIEEILLKA
HCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQEQSKSSGSSSESGQESQSGESQSDSGSSDSGN
HHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVRRQLCTVLLSLSFFIILTACGGGGGNSESEGEYDSTKKMVVDILQTEDGKKALREIMH
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
DEELKNLLVMESDTVKNAVNEALTSEESKKSWEKMFEDPEFVKTYAQSISDEQKNLMKDL
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
MNDSQFQKQMIELLNNPEVTEQMLSVVKSQQFRAHLEETIQQTLQSPIFQAKIEEILLKA
HCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQEQSKSSGSSSESGQESQSGESQSDSGSSDSGN
HHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2517635; 8969501; 9384377; 8576055; 7559346 [H]