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The map label for this gene is recR

Identifier: 23097486

GI number: 23097486

Start: 35698

End: 36294

Strand: Direct

Name: recR

Synonym: OB0031

Alternate gene names: 23097486

Gene position: 35698-36294 (Clockwise)

Preceding gene: 23097485

Following gene: 23097487

Centisome position: 0.98

GC content: 39.2

Gene sequence:

>597_bases
ATGTATTATCCAGAACCTATCACGAAATTAATAGATAGCTTCTCTAAATTGCCAGGAATCGGCCCCAAAACGGCCGCTCG
TTTGGCTTTCTTTGTGTTGAATATGAAAGAAGATGACGTATTAAATTTTGCGAATGCACTAGTTAGTGCAAAACGAGAAT
TATCTCATTGTTCCGTATGTGGCCATATAACGGATCAAGATCCATGTGCAATCTGTACGGATACGAGCCGTGATGGATCA
CTTATTTGTGTTGTTCAGGATCCAAAAGATGTCATTGCAATGGAAAAGATGAAAGAATTCCACGGGAAATACCATGTGTT
ACATGGAGCGATTTCACCTATGGATGGAATTGGACCAGAGGATATCAATGTTCCTGACTTAATTAACCGTTTAAAGGATG
AGGAAGTAGAAGAACTTATACTTGCAACGAATCCCAATATCGAAGGTGAAGCAACTGCAATGTATATTTCACGATTAGTA
AAACCATCTGGAATTCGAACGACAAGGATTGCTCATGGTTTGCCAGTAGGTGGAGATCTAGAGTATGCAGATGAAGTAAC
CTTATCAAAAGCATTAGAAGGTAGAAGAGACGTTTAA

Upstream 100 bases:

>100_bases
AAGTACAATTCTTTCTTTTTGCATAATTGCAGTAGATATTGGTTATTAACCAAGGAGTTCAACCATAAATCAACATTGTG
GTTGTGTAGGAGGAAACATC

Downstream 100 bases:

>100_bases
TAATAATGCAGGAATGTAGGGGCTAGGTGAAGGGTAATGGGGAAAAAGTTAAGAAAAAGAGATGTAGATGAAGAATTATT
AAATTCTCTGTACCATGTAG

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MYYPEPITKLIDSFSKLPGIGPKTAARLAFFVLNMKEDDVLNFANALVSAKRELSHCSVCGHITDQDPCAICTDTSRDGS
LICVVQDPKDVIAMEKMKEFHGKYHVLHGAISPMDGIGPEDINVPDLINRLKDEEVEELILATNPNIEGEATAMYISRLV
KPSGIRTTRIAHGLPVGGDLEYADEVTLSKALEGRRDV

Sequences:

>Translated_198_residues
MYYPEPITKLIDSFSKLPGIGPKTAARLAFFVLNMKEDDVLNFANALVSAKRELSHCSVCGHITDQDPCAICTDTSRDGS
LICVVQDPKDVIAMEKMKEFHGKYHVLHGAISPMDGIGPEDINVPDLINRLKDEEVEELILATNPNIEGEATAMYISRLV
KPSGIRTTRIAHGLPVGGDLEYADEVTLSKALEGRRDV
>Mature_198_residues
MYYPEPITKLIDSFSKLPGIGPKTAARLAFFVLNMKEDDVLNFANALVSAKRELSHCSVCGHITDQDPCAICTDTSRDGS
LICVVQDPKDVIAMEKMKEFHGKYHVLHGAISPMDGIGPEDINVPDLINRLKDEEVEELILATNPNIEGEATAMYISRLV
KPSGIRTTRIAHGLPVGGDLEYADEVTLSKALEGRRDV

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=193, Percent_Identity=45.5958549222798, Blast_Score=186, Evalue=9e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_OCEIH (Q8EU58)

Other databases:

- EMBL:   BA000028
- RefSeq:   NP_690952.1
- ProteinModelPortal:   Q8EU58
- SMR:   Q8EU58
- GeneID:   1015065
- GenomeReviews:   BA000028_GR
- KEGG:   oih:OB0031
- NMPDR:   fig|221109.1.peg.31
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- ProtClustDB:   PRK00076
- BioCyc:   OIHE221109:OB0031-MONOMER
- HAMAP:   MF_00017
- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00278
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 21707; Mature: 21707

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYYPEPITKLIDSFSKLPGIGPKTAARLAFFVLNMKEDDVLNFANALVSAKRELSHCSVC
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
GHITDQDPCAICTDTSRDGSLICVVQDPKDVIAMEKMKEFHGKYHVLHGAISPMDGIGPE
CCCCCCCCCEEEECCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCC
DINVPDLINRLKDEEVEELILATNPNIEGEATAMYISRLVKPSGIRTTRIAHGLPVGGDL
CCCHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCC
EYADEVTLSKALEGRRDV
CHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MYYPEPITKLIDSFSKLPGIGPKTAARLAFFVLNMKEDDVLNFANALVSAKRELSHCSVC
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
GHITDQDPCAICTDTSRDGSLICVVQDPKDVIAMEKMKEFHGKYHVLHGAISPMDGIGPE
CCCCCCCCCEEEECCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCC
DINVPDLINRLKDEEVEELILATNPNIEGEATAMYISRLVKPSGIRTTRIAHGLPVGGDL
CCCHHHHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCC
EYADEVTLSKALEGRRDV
CHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12235376