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The map label for this gene is qcrB [H]

Identifier: 229918718

GI number: 229918718

Start: 2965424

End: 2966095

Strand: Direct

Name: qcrB [H]

Synonym: EAT1b_3005

Alternate gene names: 229918718

Gene position: 2965424-2966095 (Clockwise)

Preceding gene: 229918717

Following gene: 229918719

Centisome position: 98.85

GC content: 49.11

Gene sequence:

>672_bases
ATGTTACAAAAAATTTATGACTGGGTCGATGAACGCGTAGACATCACACCGCTCTGGCGCGATATCGCAGACCATGAAGT
ACCGGAACACGTCAACCCTGCTCATCACTTCTCTGCATTTGTCTATTGTTTTGGCGGTTTGACGTTCTTTACAATCGTCA
TCCAGATCCTTTCAGGGATGTTCTTGACGATGTATTACGTACCAGATATCATCAACGCGCACGCGTCGGTGTATTACTTG
CAAAATGAGATCGCACACGGACAAATCGTTCGTGGGATGCACCACTGGGGCGCATCTGTAGCCATCGTCATGTTATTCTT
ACATACGCTCCGCGTGTTCTTCACGGGATCGTATAAGAAGCCACGTGAGCTCAACTGGGTCGTCGGTGTTCTCTTGTTCT
TCGTCGTCTTGGCGCTCGGACTCACAGGATACTTGCTTCCATGGGACATGAAGGCATTGTTCGCAACAAAAGTTACGCTT
CAAATCGCTGAAAGTGTACCGGTTATCGGTGGTATTGCGAAGACACTTCTCGCTGGTGGTGAGATTGTCGGGGCGAGCAC
ACTCGCACGATTCTTCGCAATTCACGTCTTCTTCTTACCGGCGGCATTGTTCGGACTGTTGGGAGCCCACTTCTTGATGA
TTCGTAAACAAGGGGTTTCTGGACCGCTATAA

Upstream 100 bases:

>100_bases
CCACCGACAGCACCGCTTGCACGTTATGAAAAAGAAGAAAAAGACGGCTTCCTATATTTAGGTAGTCCAGTCGCTCAGTA
ATGAGAGGGGGAACTAGCCG

Downstream 100 bases:

>100_bases
GCCGATTCGAGGAGAAAAAGGAGGAGAAACGATATGCATCGCGGTAAAGGGATGAAATTTGTAACCGACTCTCGAGTAGG
AATCTCGAATCGGAAACAAA

Product: cytochrome b6

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MLQKIYDWVDERVDITPLWRDIADHEVPEHVNPAHHFSAFVYCFGGLTFFTIVIQILSGMFLTMYYVPDIINAHASVYYL
QNEIAHGQIVRGMHHWGASVAIVMLFLHTLRVFFTGSYKKPRELNWVVGVLLFFVVLALGLTGYLLPWDMKALFATKVTL
QIAESVPVIGGIAKTLLAGGEIVGASTLARFFAIHVFFLPAALFGLLGAHFLMIRKQGVSGPL

Sequences:

>Translated_223_residues
MLQKIYDWVDERVDITPLWRDIADHEVPEHVNPAHHFSAFVYCFGGLTFFTIVIQILSGMFLTMYYVPDIINAHASVYYL
QNEIAHGQIVRGMHHWGASVAIVMLFLHTLRVFFTGSYKKPRELNWVVGVLLFFVVLALGLTGYLLPWDMKALFATKVTL
QIAESVPVIGGIAKTLLAGGEIVGASTLARFFAIHVFFLPAALFGLLGAHFLMIRKQGVSGPL
>Mature_223_residues
MLQKIYDWVDERVDITPLWRDIADHEVPEHVNPAHHFSAFVYCFGGLTFFTIVIQILSGMFLTMYYVPDIINAHASVYYL
QNEIAHGQIVRGMHHWGASVAIVMLFLHTLRVFFTGSYKKPRELNWVVGVLLFFVVLALGLTGYLLPWDMKALFATKVTL
QIAESVPVIGGIAKTLLAGGEIVGASTLARFFAIHVFFLPAALFGLLGAHFLMIRKQGVSGPL

Specific function: Component of the menaquinol-cytochrome c reductase complex [H]

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b family [H]

Homologues:

Organism=Homo sapiens, GI251831119, Length=182, Percent_Identity=32.4175824175824, Blast_Score=105, Evalue=4e-23,
Organism=Saccharomyces cerevisiae, GI6226529, Length=202, Percent_Identity=29.2079207920792, Blast_Score=91, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6226532, Length=202, Percent_Identity=29.2079207920792, Blast_Score=91, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6226531, Length=159, Percent_Identity=28.9308176100629, Blast_Score=70, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6226530, Length=123, Percent_Identity=32.520325203252, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00033 Cytochrom_B_N [H]

EC number: 1.10.2.-

Molecular weight: Translated: 24920; Mature: 24920

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: PS51002 CYTB_NTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQKIYDWVDERVDITPLWRDIADHEVPEHVNPAHHFSAFVYCFGGLTFFTIVIQILSGM
CHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLTMYYVPDIINAHASVYYLQNEIAHGQIVRGMHHWGASVAIVMLFLHTLRVFFTGSYKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PRELNWVVGVLLFFVVLALGLTGYLLPWDMKALFATKVTLQIAESVPVIGGIAKTLLAGG
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
EIVGASTLARFFAIHVFFLPAALFGLLGAHFLMIRKQGVSGPL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLQKIYDWVDERVDITPLWRDIADHEVPEHVNPAHHFSAFVYCFGGLTFFTIVIQILSGM
CHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLTMYYVPDIINAHASVYYLQNEIAHGQIVRGMHHWGASVAIVMLFLHTLRVFFTGSYKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PRELNWVVGVLLFFVVLALGLTGYLLPWDMKALFATKVTLQIAESVPVIGGIAKTLLAGG
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
EIVGASTLARFFAIHVFFLPAALFGLLGAHFLMIRKQGVSGPL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7592464; 8760912; 9384377 [H]