Click here to switch to the map view.

The map label for this gene is fliP [H]

Identifier: 229918642

GI number: 229918642

Start: 2888630

End: 2889295

Strand: Direct

Name: fliP [H]

Synonym: EAT1b_2929

Alternate gene names: 229918642

Gene position: 2888630-2889295 (Clockwise)

Preceding gene: 229918641

Following gene: 229918643

Centisome position: 96.29

GC content: 44.74

Gene sequence:

>666_bases
ATGACGACGTTTGAGCAATTGATCAATTTAGAAACACCGGACAGCACGTCGACATCCATCAAGCTTTTGATTTTGTTGAC
ATTGCTGACGCTCGCACCATCCTTTTTAATCTTGATGACTTGCTTTACTCGGGTCGTGGTCGTCTTGTCATTCATTCGAC
CGGCACTCGGTACACAGCAAACGCCACCGAACCAATTGATTGTCGGGTTGGCACTATTCATCACACTATTCGTCATGTCT
CCGGTTCTTTCGGATTTGAACGAGAACGCATTAAAACCATACCTCGATGACAAGATCTCACAAGATGAGGCGTTCGATGA
GGCAAGTGGGACGATGAAGGAGTTCATGTCGAAATATACAAGACAAGAAGATTTACAACTGTTCTTAAAGTATGGGAATT
ACGAGCAGCCGGAGACGCTTGATGATGTGCCGCTCCTCGCTTTGGTACCTGCTTACGCGATCAGTGAGTTGAAGACCGCT
TTCCAAATCGGCTTCATGATTTTCTTACCGTTTTTGATCATTGATATGGTAGTCGCAAGTGTCCTCATGTCGATGGGGAT
GATGATGCTTCCACCGGTCATGATTGCATTGCCGTTTAAATTATTGTTGTTTGTATTGGTCGATGGCTGGCACTTGATTG
TGGAATCATTGCTTAGAAGTATGTAG

Upstream 100 bases:

>100_bases
AGCAAACGGAATCCTTGTCACTCCGAACGTCAAATTCGAATGCATTTTTAGACACCTTTAAGAAACAACTCGCTCAGCTA
GAAGAAGTGAGGAAGAAATC

Downstream 100 bases:

>100_bases
GGGGAACGGACATGACACAAGAAATGGTCATCTATTTGGCGACAGAGAGTGTGTGGACCTTATTAAAAATATCAATGCCA
CTTCTGCTCATCTCACTGAT

Product: flagellar biosynthetic protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MTTFEQLINLETPDSTSTSIKLLILLTLLTLAPSFLILMTCFTRVVVVLSFIRPALGTQQTPPNQLIVGLALFITLFVMS
PVLSDLNENALKPYLDDKISQDEAFDEASGTMKEFMSKYTRQEDLQLFLKYGNYEQPETLDDVPLLALVPAYAISELKTA
FQIGFMIFLPFLIIDMVVASVLMSMGMMMLPPVMIALPFKLLLFVLVDGWHLIVESLLRSM

Sequences:

>Translated_221_residues
MTTFEQLINLETPDSTSTSIKLLILLTLLTLAPSFLILMTCFTRVVVVLSFIRPALGTQQTPPNQLIVGLALFITLFVMS
PVLSDLNENALKPYLDDKISQDEAFDEASGTMKEFMSKYTRQEDLQLFLKYGNYEQPETLDDVPLLALVPAYAISELKTA
FQIGFMIFLPFLIIDMVVASVLMSMGMMMLPPVMIALPFKLLLFVLVDGWHLIVESLLRSM
>Mature_220_residues
TTFEQLINLETPDSTSTSIKLLILLTLLTLAPSFLILMTCFTRVVVVLSFIRPALGTQQTPPNQLIVGLALFITLFVMSP
VLSDLNENALKPYLDDKISQDEAFDEASGTMKEFMSKYTRQEDLQLFLKYGNYEQPETLDDVPLLALVPAYAISELKTAF
QIGFMIFLPFLIIDMVVASVLMSMGMMMLPPVMIALPFKLLLFVLVDGWHLIVESLLRSM

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=207, Percent_Identity=52.1739130434783, Blast_Score=223, Evalue=9e-60,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 24824; Mature: 24693

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: PS01060 FLIP_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTFEQLINLETPDSTSTSIKLLILLTLLTLAPSFLILMTCFTRVVVVLSFIRPALGTQQ
CCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TPPNQLIVGLALFITLFVMSPVLSDLNENALKPYLDDKISQDEAFDEASGTMKEFMSKYT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHH
RQEDLQLFLKYGNYEQPETLDDVPLLALVPAYAISELKTAFQIGFMIFLPFLIIDMVVAS
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLMSMGMMMLPPVMIALPFKLLLFVLVDGWHLIVESLLRSM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
>Mature Secondary Structure 
TTFEQLINLETPDSTSTSIKLLILLTLLTLAPSFLILMTCFTRVVVVLSFIRPALGTQQ
CCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TPPNQLIVGLALFITLFVMSPVLSDLNENALKPYLDDKISQDEAFDEASGTMKEFMSKYT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHH
RQEDLQLFLKYGNYEQPETLDDVPLLALVPAYAISELKTAFQIGFMIFLPFLIIDMVVAS
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLMSMGMMMLPPVMIALPFKLLLFVLVDGWHLIVESLLRSM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1597417; 9384377 [H]