| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is cheY [H]
Identifier: 229918640
GI number: 229918640
Start: 2887777
End: 2888142
Strand: Direct
Name: cheY [H]
Synonym: EAT1b_2927
Alternate gene names: 229918640
Gene position: 2887777-2888142 (Clockwise)
Preceding gene: 229918639
Following gene: 229918641
Centisome position: 96.26
GC content: 46.17
Gene sequence:
>366_bases ATGAGTGCAAAAGTATTAGTAGTGGATGACGCAGCGTTCATGCGTATGATGATCAAGGACATTTTGACAAAGAATGGATA TGACGTAGTAGGTGAGGCAGAAAACGGCGCGGACGCCGTCGCGAAATACCGTGAACTCACACCGGATCTCGTTACACTTG ATATCACGATGCCTGAGATGGATGGACTCGCAGCATTGAAAGAAATTCGTAGTTTCGACTCGAATGCGAAAATCATCATG TGTTCAGCGATGGGACAACAAGCGATGGTCATCGATGCCATTCAAGCTGGAGCAAAAGACTTCATCGTCAAGCCTTTCAA TGCAGAACGTGTCATCGAAGCAGTTTCTAAAACGGTCGCACAATGA
Upstream 100 bases:
>100_bases AGAGGAGAAGTCGTTGTCATTGAAGAAAACTTTGGGGTACGTGTAACAGAAATTATTCAACCGCATGAGCGGATCGGAAT CGTTTAAGGAGGAATTTAGA
Downstream 100 bases:
>100_bases AGAAATGGTGGTTGATTATTCTCCTCGTGGTCGGGCTCTCTGCTCCGGCCACGGTTGAGGCCGCCACCGTAGACCAACAA TTCGAGCAACAACAGACAGA
Product: response regulator receiver protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MSAKVLVVDDAAFMRMMIKDILTKNGYDVVGEAENGADAVAKYRELTPDLVTLDITMPEMDGLAALKEIRSFDSNAKIIM CSAMGQQAMVIDAIQAGAKDFIVKPFNAERVIEAVSKTVAQ
Sequences:
>Translated_121_residues MSAKVLVVDDAAFMRMMIKDILTKNGYDVVGEAENGADAVAKYRELTPDLVTLDITMPEMDGLAALKEIRSFDSNAKIIM CSAMGQQAMVIDAIQAGAKDFIVKPFNAERVIEAVSKTVAQ >Mature_120_residues SAKVLVVDDAAFMRMMIKDILTKNGYDVVGEAENGADAVAKYRELTPDLVTLDITMPEMDGLAALKEIRSFDSNAKIIMC SAMGQQAMVIDAIQAGAKDFIVKPFNAERVIEAVSKTVAQ
Specific function: Has a central controlling role in chemotaxis. Although it is homologous to the CheY protein of other bacteria, it is thought to function in a different manner [H]
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788550, Length=108, Percent_Identity=34.2592592592593, Blast_Score=79, Evalue=7e-17, Organism=Escherichia coli, GI1788191, Length=116, Percent_Identity=39.6551724137931, Blast_Score=79, Evalue=1e-16, Organism=Escherichia coli, GI1786599, Length=114, Percent_Identity=32.4561403508772, Blast_Score=71, Evalue=2e-14, Organism=Escherichia coli, GI1790437, Length=117, Percent_Identity=31.6239316239316, Blast_Score=67, Evalue=3e-13, Organism=Escherichia coli, GI1787375, Length=109, Percent_Identity=32.1100917431193, Blast_Score=66, Evalue=6e-13, Organism=Escherichia coli, GI1790299, Length=117, Percent_Identity=32.4786324786325, Blast_Score=66, Evalue=7e-13, Organism=Escherichia coli, GI1788222, Length=112, Percent_Identity=35.7142857142857, Blast_Score=64, Evalue=3e-12, Organism=Escherichia coli, GI1789809, Length=112, Percent_Identity=34.8214285714286, Blast_Score=63, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 13101; Mature: 12970
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 7.4 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 6.7 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAKVLVVDDAAFMRMMIKDILTKNGYDVVGEAENGADAVAKYRELTPDLVTLDITMPEM CCCEEEEEECHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCEEEEEEECCCC DGLAALKEIRSFDSNAKIIMCSAMGQQAMVIDAIQAGAKDFIVKPFNAERVIEAVSKTVA CHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHC Q C >Mature Secondary Structure SAKVLVVDDAAFMRMMIKDILTKNGYDVVGEAENGADAVAKYRELTPDLVTLDITMPEM CCEEEEEECHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCEEEEEEECCCC DGLAALKEIRSFDSNAKIIMCSAMGQQAMVIDAIQAGAKDFIVKPFNAERVIEAVSKTVA CHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHC Q C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1905718; 9384377; 1447979; 1597417; 8755892 [H]