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The map label for this gene is 229918528

Identifier: 229918528

GI number: 229918528

Start: 2782852

End: 2783466

Strand: Direct

Name: 229918528

Synonym: EAT1b_2815

Alternate gene names: NA

Gene position: 2782852-2783466 (Clockwise)

Preceding gene: 229918527

Following gene: 229918529

Centisome position: 92.76

GC content: 49.27

Gene sequence:

>615_bases
ATGAAACGGAATAGCTATTTGACGGTCGGTTTGACCGTCTTGACGCTTGTCGTCATCGGAGTAGCCGTGTATTTTGTTTT
CTTCAATCAAGACGACCTACCCGTCATTCAAGAGCCAACCCCGTTCACATTGACGAACGCATTAAATGAAGAGACCTATG
ATTCCGATAACGGGAAAGTGAAGATCGTGACGTTCTTCTATACGAACTGTCCAGATATTTGTCCGCTCACGTTACGTGAT
TTCATGAAGCTCGAAAAAGAATTGAAAAAAGAGAACTTATACGGATCGGACGTAGAACTCGTTGCGATCACGGTTGACCC
GGAGGTGGATACCGTGCCCGTTCTGAAAAATTACGGGGAAGCATTCCAAGCGGAGCCGACTGGATGGAAGATGTTGACGG
GAGACCAGGTAGACATCGATCGGATCACGCGCCAGCTACAGTTCTATTATTCGAAGGCGAACAGCGGACTCGTGACGCAT
GCGACGACGATGTACGTCATCGACCGCCATCATGATGTCCGGGCTGTCGCGCAGATGGCAACGGCAGGGGATGAACCGGT
CGATATCGAATCTATCATGGAGGACGTTAAAGTGCTCGCGAATGAAAAGGAGTGA

Upstream 100 bases:

>100_bases
GACGGTTTACATTCTTCTCTATGTGGCATATGACCCGGGTGAAACGACGAACGTATTCCGCGCGATAATCGGAGGATGAT
CCATAGAGAGGGAGAGCTGT

Downstream 100 bases:

>100_bases
TCACCATGAACGATACGATGGCTGTGATTGGGAATGACTATTCATACGGAGACGTGACGATTGCGGAACGGGCGATTGAA
GATTTGATCGCGTGTAGTGC

Product: electron transport protein SCO1/SenC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MKRNSYLTVGLTVLTLVVIGVAVYFVFFNQDDLPVIQEPTPFTLTNALNEETYDSDNGKVKIVTFFYTNCPDICPLTLRD
FMKLEKELKKENLYGSDVELVAITVDPEVDTVPVLKNYGEAFQAEPTGWKMLTGDQVDIDRITRQLQFYYSKANSGLVTH
ATTMYVIDRHHDVRAVAQMATAGDEPVDIESIMEDVKVLANEKE

Sequences:

>Translated_204_residues
MKRNSYLTVGLTVLTLVVIGVAVYFVFFNQDDLPVIQEPTPFTLTNALNEETYDSDNGKVKIVTFFYTNCPDICPLTLRD
FMKLEKELKKENLYGSDVELVAITVDPEVDTVPVLKNYGEAFQAEPTGWKMLTGDQVDIDRITRQLQFYYSKANSGLVTH
ATTMYVIDRHHDVRAVAQMATAGDEPVDIESIMEDVKVLANEKE
>Mature_204_residues
MKRNSYLTVGLTVLTLVVIGVAVYFVFFNQDDLPVIQEPTPFTLTNALNEETYDSDNGKVKIVTFFYTNCPDICPLTLRD
FMKLEKELKKENLYGSDVELVAITVDPEVDTVPVLKNYGEAFQAEPTGWKMLTGDQVDIDRITRQLQFYYSKANSGLVTH
ATTMYVIDRHHDVRAVAQMATAGDEPVDIESIMEDVKVLANEKE

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SCO1/2 family [H]

Homologues:

Organism=Homo sapiens, GI4759068, Length=133, Percent_Identity=30.8270676691729, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003782
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF02630 SCO1-SenC [H]

EC number: NA

Molecular weight: Translated: 23040; Mature: 23040

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRNSYLTVGLTVLTLVVIGVAVYFVFFNQDDLPVIQEPTPFTLTNALNEETYDSDNGKV
CCCCCEEEHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCEEHHHHCCCCCCCCCCCEE
KIVTFFYTNCPDICPLTLRDFMKLEKELKKENLYGSDVELVAITVDPEVDTVPVLKNYGE
EEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHCCH
AFQAEPTGWKMLTGDQVDIDRITRQLQFYYSKANSGLVTHATTMYVIDRHHDVRAVAQMA
HHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCHHHHHHHHH
TAGDEPVDIESIMEDVKVLANEKE
HCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKRNSYLTVGLTVLTLVVIGVAVYFVFFNQDDLPVIQEPTPFTLTNALNEETYDSDNGKV
CCCCCEEEHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCEEHHHHCCCCCCCCCCCEE
KIVTFFYTNCPDICPLTLRDFMKLEKELKKENLYGSDVELVAITVDPEVDTVPVLKNYGE
EEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHCCH
AFQAEPTGWKMLTGDQVDIDRITRQLQFYYSKANSGLVTHATTMYVIDRHHDVRAVAQMA
HHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCHHHHHHHHH
TAGDEPVDIESIMEDVKVLANEKE
HCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA