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The map label for this gene is ykrA [H]

Identifier: 229918493

GI number: 229918493

Start: 2745677

End: 2746465

Strand: Reverse

Name: ykrA [H]

Synonym: EAT1b_2780

Alternate gene names: 229918493

Gene position: 2746465-2745677 (Counterclockwise)

Preceding gene: 229918496

Following gene: 229918487

Centisome position: 91.55

GC content: 49.43

Gene sequence:

>789_bases
ATGGTGAATCAAATGGAAGATCAAAAGGTTGTTTTCTTCGACATTGACGGCACGCTTTTACATGAAGGTAGTTATATCCC
GCCTTCCACGATTTCAGCGATTCAAGCACTTCAGGCAAACGGCGTCGAGACGTTCATCGCGACGGGACGAGGACCGGCCA
TGCTATCCGACATCCCAGAACGTGTCGGGATTGATAGTCTCGTTTGTTACAACGGTCAGATTGTCGTGCACAAAGGTGAA
ATTGTCTATCGTAACACGCTCTCGAAAGATGCACTCGGTCGCTTGACGACGCACGCTTCTTCAAATGACCATACACTCGT
CTATTTGGGTCAGGACCGTGGTGGTGCTTCAAGACCGAATGACGCCATCGTTGAACAATCGCTCGGCGAACTCGACATGC
CGATCCCTTCATTCGAACCGAACTTCCACGCAGAAGAGGATGTGTATCAGACGTTACTGTATTGCACGCCTGAAGACGAG
CATCATTACATCAATGCTTATCGTGAGTTCGATTTTATCCGTTGGCACCCTCATGCGATGGACGTGATCAATAAAGGAGC
CAGTAAAGCAGACGGCATCCGTCACTTTATTGAGACCAACGGCTACCGTCTGGAGAATACGTATGCTTTCGGAGATGCAT
TGAACGACTTGGCCATGCTTCAGTATGTAGGGACAGGAATCGCCATGGGCAATGGTCGCACCGAAGCGAAAGACGTGGCG
GATTTCGTCACGAAATCCATCCTTGAAGATGGGATTGAGTACGGCCTAAAGGCGATGAAGCTCATCTAA

Upstream 100 bases:

>100_bases
CAATATTTCACTAACGATGTGATATTCGTGGTAGTTTCCCTATTTCGTGTTATCCTTTTAGTGGGTTCAGAAAACATATT
TTTTTAGATAAAGAGAAAGA

Downstream 100 bases:

>100_bases
AAAAAGACCCTCGGAGTCAAACCGTCGAGTTGGATCAATCGATTCAACGATCGCGGCATCGCTCCAAAGGTCTTTTCTTT
TATCTCGAACGAAGAGTGCG

Product: Cof-like hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MVNQMEDQKVVFFDIDGTLLHEGSYIPPSTISAIQALQANGVETFIATGRGPAMLSDIPERVGIDSLVCYNGQIVVHKGE
IVYRNTLSKDALGRLTTHASSNDHTLVYLGQDRGGASRPNDAIVEQSLGELDMPIPSFEPNFHAEEDVYQTLLYCTPEDE
HHYINAYREFDFIRWHPHAMDVINKGASKADGIRHFIETNGYRLENTYAFGDALNDLAMLQYVGTGIAMGNGRTEAKDVA
DFVTKSILEDGIEYGLKAMKLI

Sequences:

>Translated_262_residues
MVNQMEDQKVVFFDIDGTLLHEGSYIPPSTISAIQALQANGVETFIATGRGPAMLSDIPERVGIDSLVCYNGQIVVHKGE
IVYRNTLSKDALGRLTTHASSNDHTLVYLGQDRGGASRPNDAIVEQSLGELDMPIPSFEPNFHAEEDVYQTLLYCTPEDE
HHYINAYREFDFIRWHPHAMDVINKGASKADGIRHFIETNGYRLENTYAFGDALNDLAMLQYVGTGIAMGNGRTEAKDVA
DFVTKSILEDGIEYGLKAMKLI
>Mature_262_residues
MVNQMEDQKVVFFDIDGTLLHEGSYIPPSTISAIQALQANGVETFIATGRGPAMLSDIPERVGIDSLVCYNGQIVVHKGE
IVYRNTLSKDALGRLTTHASSNDHTLVYLGQDRGGASRPNDAIVEQSLGELDMPIPSFEPNFHAEEDVYQTLLYCTPEDE
HHYINAYREFDFIRWHPHAMDVINKGASKADGIRHFIETNGYRLENTYAFGDALNDLAMLQYVGTGIAMGNGRTEAKDVA
DFVTKSILEDGIEYGLKAMKLI

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=273, Percent_Identity=27.8388278388278, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1786982, Length=262, Percent_Identity=25.5725190839695, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI48994981, Length=245, Percent_Identity=24.4897959183673, Blast_Score=68, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 29046; Mature: 29046

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNQMEDQKVVFFDIDGTLLHEGSYIPPSTISAIQALQANGVETFIATGRGPAMLSDIPE
CCCCCCCCEEEEEECCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHH
RVGIDSLVCYNGQIVVHKGEIVYRNTLSKDALGRLTTHASSNDHTLVYLGQDRGGASRPN
HCCCCEEEEECCEEEEECCCEEEECCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCC
DAIVEQSLGELDMPIPSFEPNFHAEEDVYQTLLYCTPEDEHHYINAYREFDFIRWHPHAM
HHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHEEECCCCCCHHHHHHHHCCEEEECCHHH
DVINKGASKADGIRHFIETNGYRLENTYAFGDALNDLAMLQYVGTGIAMGNGRTEAKDVA
HHHHCCCCHHHHHHHHHHCCCEEEECEEEHHHHHHHHHHHHHHHCCEEECCCCCHHHHHH
DFVTKSILEDGIEYGLKAMKLI
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVNQMEDQKVVFFDIDGTLLHEGSYIPPSTISAIQALQANGVETFIATGRGPAMLSDIPE
CCCCCCCCEEEEEECCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHH
RVGIDSLVCYNGQIVVHKGEIVYRNTLSKDALGRLTTHASSNDHTLVYLGQDRGGASRPN
HCCCCEEEEECCEEEEECCCEEEECCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCC
DAIVEQSLGELDMPIPSFEPNFHAEEDVYQTLLYCTPEDEHHYINAYREFDFIRWHPHAM
HHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHEEECCCCCCHHHHHHHHCCEEEECCHHH
DVINKGASKADGIRHFIETNGYRLENTYAFGDALNDLAMLQYVGTGIAMGNGRTEAKDVA
HHHHCCCCHHHHHHHHHHCCCEEEECEEEHHHHHHHHHHHHHHHCCEEECCCCCHHHHHH
DFVTKSILEDGIEYGLKAMKLI
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]