| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is ywcF [H]
Identifier: 229918469
GI number: 229918469
Start: 2727572
End: 2728738
Strand: Reverse
Name: ywcF [H]
Synonym: EAT1b_2756
Alternate gene names: 229918469
Gene position: 2728738-2727572 (Counterclockwise)
Preceding gene: 229918472
Following gene: 229918465
Centisome position: 90.96
GC content: 47.99
Gene sequence:
>1167_bases ATGAACCGTATACAATCATATTTTAAAAGTTTAGATACGACACTGTTGACCATCGTCTTCCTATTGATGATCATCAGTCT CGGTGCAATCTATACCGCTCAACCGATGTTGCCAACGCGACTTCAACATATCAACTTCGCTCTTGAACAAGGCATTCGTT ATGTCATCGGCTTTTTTGCGATGTTCGCGATCATGACGATCGAATATGAGCAACTCCGGAAAATCCATTGGTACTTATAC GCATTCGGTCTACTTCTGCTCGTCGGTCTGATTCCACTTCGTGACACGTCGCTCGTGCCGAACATCAATGGGGCGTATGG ATGGTATAATGTGCCTGGCTTCAGTTTCCAGCCGGCCGAATTCATGAAGCTCTTTTTACTGATTTCCATGTCGACTATCG TCTATGAGCACAATAAACGTTATGGCTCGTCACAACTCGATACGTGGCTCCTCGTGAAATTGGTATTAGTGGCCATCCCG CCGCTCGGTCTGATTGTGACACAACCGGACTTAGGGACCGGGCTCGTCTTGATGACGATGCTCGGCGCCATCATCATCGT CTCGGGAATCGGTTGGAAGTGGCTTCTCGGTCTCTTCAGCGCCGCGGCTTTGACCATCGGCACGTTCATGTATCTGTTCT TTGCCCATTTCGAAGTCTTGCAAGCGTTCGTACCTGGACATGCGCTCAACCGCTTCAAGGCCTGGATATATCCATACGAA TATTCAGATGACTTGGCATTCCAATTGATCAAATCACTACAGGCGATTGGTTCTGGACAGATGTTCGGGGCGGGATACGG TCAAGGACTCGTCTATTTACCGGAATCTCAAACGGACTTCATATTTGCTGTTATCGCAGAACACTATGGGTTCATCGGCG CAGCTCTCGTGATCATCGTCTTCTTCCTATTCCTCTATCGGATGATTCACATTGCATTAGAGTCTAGTAGCGCGTTCGGA AGTTATATCGTCACCGGCGTCATCGCCATGTTCACGTTCCAGGTGTTCCAAAACATCGGTATGACGATCGGTGTCTTGCC AATCACCGGACTCACCCTTCCGTTCGTCAGTTACGGGGGGACAGGGATTATCATGAACATGATTGCCATCGGTCTCGTCA TGAACGTGGCCTCTAAATCAAAAACCTATATGTTTGATGATGATTGA
Upstream 100 bases:
>100_bases CAGAAAGGTTTCTGTTTTGTCAACCGACTCGTTACGTATTGCGATTTTTTTAAGTTGCGGTAAGATAAAATACGTATAGA AAGGGTGATTCGACTCCGTT
Downstream 100 bases:
>100_bases CAAAATCCCTCAAGGTCTAACCTTGAGGGATTTCTTTATACAGTTCGAAAATCTTCCGGAATCGGCGCCTCAATCTGAAT CGTATCCCCTGTCATCGGGT
Product: cell cycle protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MNRIQSYFKSLDTTLLTIVFLLMIISLGAIYTAQPMLPTRLQHINFALEQGIRYVIGFFAMFAIMTIEYEQLRKIHWYLY AFGLLLLVGLIPLRDTSLVPNINGAYGWYNVPGFSFQPAEFMKLFLLISMSTIVYEHNKRYGSSQLDTWLLVKLVLVAIP PLGLIVTQPDLGTGLVLMTMLGAIIIVSGIGWKWLLGLFSAAALTIGTFMYLFFAHFEVLQAFVPGHALNRFKAWIYPYE YSDDLAFQLIKSLQAIGSGQMFGAGYGQGLVYLPESQTDFIFAVIAEHYGFIGAALVIIVFFLFLYRMIHIALESSSAFG SYIVTGVIAMFTFQVFQNIGMTIGVLPITGLTLPFVSYGGTGIIMNMIAIGLVMNVASKSKTYMFDDD
Sequences:
>Translated_388_residues MNRIQSYFKSLDTTLLTIVFLLMIISLGAIYTAQPMLPTRLQHINFALEQGIRYVIGFFAMFAIMTIEYEQLRKIHWYLY AFGLLLLVGLIPLRDTSLVPNINGAYGWYNVPGFSFQPAEFMKLFLLISMSTIVYEHNKRYGSSQLDTWLLVKLVLVAIP PLGLIVTQPDLGTGLVLMTMLGAIIIVSGIGWKWLLGLFSAAALTIGTFMYLFFAHFEVLQAFVPGHALNRFKAWIYPYE YSDDLAFQLIKSLQAIGSGQMFGAGYGQGLVYLPESQTDFIFAVIAEHYGFIGAALVIIVFFLFLYRMIHIALESSSAFG SYIVTGVIAMFTFQVFQNIGMTIGVLPITGLTLPFVSYGGTGIIMNMIAIGLVMNVASKSKTYMFDDD >Mature_388_residues MNRIQSYFKSLDTTLLTIVFLLMIISLGAIYTAQPMLPTRLQHINFALEQGIRYVIGFFAMFAIMTIEYEQLRKIHWYLY AFGLLLLVGLIPLRDTSLVPNINGAYGWYNVPGFSFQPAEFMKLFLLISMSTIVYEHNKRYGSSQLDTWLLVKLVLVAIP PLGLIVTQPDLGTGLVLMTMLGAIIIVSGIGWKWLLGLFSAAALTIGTFMYLFFAHFEVLQAFVPGHALNRFKAWIYPYE YSDDLAFQLIKSLQAIGSGQMFGAGYGQGLVYLPESQTDFIFAVIAEHYGFIGAALVIIVFFLFLYRMIHIALESSSAFG SYIVTGVIAMFTFQVFQNIGMTIGVLPITGLTLPFVSYGGTGIIMNMIAIGLVMNVASKSKTYMFDDD
Specific function: This Is A Septum-Peptidoglycan Biosynthetic Protein, Involved In Cell Wall Formation. Plays A Role In The Stabilization Of The Ftsz Ring During Cell Division. [C]
COG id: COG0772
COG function: function code D; Bacterial cell division membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ftsW/rodA/spoVE family [H]
Homologues:
Organism=Escherichia coli, GI1786277, Length=388, Percent_Identity=29.1237113402062, Blast_Score=126, Evalue=3e-30, Organism=Escherichia coli, GI1786853, Length=310, Percent_Identity=30.9677419354839, Blast_Score=115, Evalue=6e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001182 - InterPro: IPR018365 [H]
Pfam domain/function: PF01098 FTSW_RODA_SPOVE [H]
EC number: NA
Molecular weight: Translated: 43318; Mature: 43318
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRIQSYFKSLDTTLLTIVFLLMIISLGAIYTAQPMLPTRLQHINFALEQGIRYVIGFFA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH MFAIMTIEYEQLRKIHWYLYAFGLLLLVGLIPLRDTSLVPNINGAYGWYNVPGFSFQPAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHH FMKLFLLISMSTIVYEHNKRYGSSQLDTWLLVKLVLVAIPPLGLIVTQPDLGTGLVLMTM HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHH LGAIIIVSGIGWKWLLGLFSAAALTIGTFMYLFFAHFEVLQAFVPGHALNRFKAWIYPYE HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEECCC YSDDLAFQLIKSLQAIGSGQMFGAGYGQGLVYLPESQTDFIFAVIAEHYGFIGAALVIIV CCCHHHHHHHHHHHHHCCCCEECCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH FFLFLYRMIHIALESSSAFGSYIVTGVIAMFTFQVFQNIGMTIGVLPITGLTLPFVSYGG HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHCHHHHHHHCCC TGIIMNMIAIGLVMNVASKSKTYMFDDD HHHHHHHHHHHHHHHHHCCCCCEECCCC >Mature Secondary Structure MNRIQSYFKSLDTTLLTIVFLLMIISLGAIYTAQPMLPTRLQHINFALEQGIRYVIGFFA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH MFAIMTIEYEQLRKIHWYLYAFGLLLLVGLIPLRDTSLVPNINGAYGWYNVPGFSFQPAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHH FMKLFLLISMSTIVYEHNKRYGSSQLDTWLLVKLVLVAIPPLGLIVTQPDLGTGLVLMTM HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHH LGAIIIVSGIGWKWLLGLFSAAALTIGTFMYLFFAHFEVLQAFVPGHALNRFKAWIYPYE HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEECCC YSDDLAFQLIKSLQAIGSGQMFGAGYGQGLVYLPESQTDFIFAVIAEHYGFIGAALVIIV CCCHHHHHHHHHHHHHCCCCEECCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH FFLFLYRMIHIALESSSAFGSYIVTGVIAMFTFQVFQNIGMTIGVLPITGLTLPFVSYGG HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHCHHHHHHHCCC TGIIMNMIAIGLVMNVASKSKTYMFDDD HHHHHHHHHHHHHHHHHCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7934828; 9384377 [H]