| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229918462
Identifier: 229918462
GI number: 229918462
Start: 2720579
End: 2721634
Strand: Direct
Name: 229918462
Synonym: EAT1b_2749
Alternate gene names: NA
Gene position: 2720579-2721634 (Clockwise)
Preceding gene: 229918461
Following gene: 229918463
Centisome position: 90.69
GC content: 47.44
Gene sequence:
>1056_bases ATGCGGTTTGCAATCGATCGGGAAGGGGATATCATTGATTCCTTTACATTAAATCGGATGCAAGCAGAGCAACTTGCTCC TTTTCGATGTCCGACTTGTCAGGAAGTATTGATTGTAAAGCAAGGTGTGAAGCGACGGCTGCATTTTGCGCATATCCACA CCTGTGGGAGGGCTGAATCGGTCACGCACCATCAGGATAAATGGGCGGTGTGCCAGTGGCTTCAAGAGAAAGGCTATCCA GTCGAGCAGGAGGTAACGATCAAGAATCGTCGAGCTGACGTACTCACGAACATGGACGGGCAGCACACCGTGTTCGAAAT TCAGGCATCTCCCTTGCGACCGGAAGAATACGCCGAGCGAACGATTGATTATCGACGAGCGGGGCTTGATGTCATTTGGA TCGCGAGCGGTCTCGATTTGAGAAGCAATCAATCGTTTCAACCATGGATGCGTCTAGAACTGTTTCAGAGACATCGGTTG TTGACGGTGAAAAATGGGAGATTGTTACGCTTCAATGGATTTCCGATTTCGATTAAGTATGGAATCGGAAGCTGGGAAAC CTCATCTTCCGTGAACACGTCACCGTACGAAGCTTACTACCGGTTCGATGCTTTTGAATGGACAGAGATGATTCGTCGTA AGCGTATGTCGCCTCTTTATCCATATCCGTTAAATCGACGGCTCATATTGAATCGGCTCTATCCACTTGGTCTGTTACCC GCATTATTACCGACCGCCTGTTACCTTCCGCTATCATCGCTTTGGGGAATTCGTGTGCATCCGATTGATTTTCAAACCGT TCTTTATTTGAATCGCTACGAGTCACCTCACGATTCCGTGGAATGGAGTATTCAAAAAACTTGTCGACAATTTGGGGTGA CACCGACAAGCGACTTTTCCCAGTCATTTCATGTACAATGGAAACAACTCTTGAATGCGAGTCGTCTATCCTGTGATGTC AGGTCATGGCCGCATCCGAAGCATTACGAGGAGGCCAGACATCACGATACACGTTTGTTTCAAGGACTTCAGCGATTGAT CTTACAATCGACTTAA
Upstream 100 bases:
>100_bases CGAACTCGTATTAGAAGAGTTCGCGAAACGGTCATTCTTTATCAAACTCGTTGAATCATTAGCTAGAATGTTTTCACCAT TGCTATGAGGAGGGAGCAAG
Downstream 100 bases:
>100_bases TCATCGAAAAGGAAGTGGACGTATGTCAGAGGTATTGACTAGACAACAAGTTCCAGTGGAAGAAACATGGAACTTAGAGA CCATCTACAGCAATGACGAG
Product: Competence CoiA family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MRFAIDREGDIIDSFTLNRMQAEQLAPFRCPTCQEVLIVKQGVKRRLHFAHIHTCGRAESVTHHQDKWAVCQWLQEKGYP VEQEVTIKNRRADVLTNMDGQHTVFEIQASPLRPEEYAERTIDYRRAGLDVIWIASGLDLRSNQSFQPWMRLELFQRHRL LTVKNGRLLRFNGFPISIKYGIGSWETSSSVNTSPYEAYYRFDAFEWTEMIRRKRMSPLYPYPLNRRLILNRLYPLGLLP ALLPTACYLPLSSLWGIRVHPIDFQTVLYLNRYESPHDSVEWSIQKTCRQFGVTPTSDFSQSFHVQWKQLLNASRLSCDV RSWPHPKHYEEARHHDTRLFQGLQRLILQST
Sequences:
>Translated_351_residues MRFAIDREGDIIDSFTLNRMQAEQLAPFRCPTCQEVLIVKQGVKRRLHFAHIHTCGRAESVTHHQDKWAVCQWLQEKGYP VEQEVTIKNRRADVLTNMDGQHTVFEIQASPLRPEEYAERTIDYRRAGLDVIWIASGLDLRSNQSFQPWMRLELFQRHRL LTVKNGRLLRFNGFPISIKYGIGSWETSSSVNTSPYEAYYRFDAFEWTEMIRRKRMSPLYPYPLNRRLILNRLYPLGLLP ALLPTACYLPLSSLWGIRVHPIDFQTVLYLNRYESPHDSVEWSIQKTCRQFGVTPTSDFSQSFHVQWKQLLNASRLSCDV RSWPHPKHYEEARHHDTRLFQGLQRLILQST >Mature_351_residues MRFAIDREGDIIDSFTLNRMQAEQLAPFRCPTCQEVLIVKQGVKRRLHFAHIHTCGRAESVTHHQDKWAVCQWLQEKGYP VEQEVTIKNRRADVLTNMDGQHTVFEIQASPLRPEEYAERTIDYRRAGLDVIWIASGLDLRSNQSFQPWMRLELFQRHRL LTVKNGRLLRFNGFPISIKYGIGSWETSSSVNTSPYEAYYRFDAFEWTEMIRRKRMSPLYPYPLNRRLILNRLYPLGLLP ALLPTACYLPLSSLWGIRVHPIDFQTVLYLNRYESPHDSVEWSIQKTCRQFGVTPTSDFSQSFHVQWKQLLNASRLSCDV RSWPHPKHYEEARHHDTRLFQGLQRLILQST
Specific function: Unknown
COG id: COG4469
COG function: function code R; Competence protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41391; Mature: 41391
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFAIDREGDIIDSFTLNRMQAEQLAPFRCPTCQEVLIVKQGVKRRLHFAHIHTCGRAES CCEECCCCCCEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC VTHHQDKWAVCQWLQEKGYPVEQEVTIKNRRADVLTNMDGQHTVFEIQASPLRPEEYAER CCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHCCCCCCEEEEEEECCCCCHHHHHHH TIDYRRAGLDVIWIASGLDLRSNQSFQPWMRLELFQRHRLLTVKNGRLLRFNGFPISIKY HHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCEEEEECCEEEEECCEEEEEEE GIGSWETSSSVNTSPYEAYYRFDAFEWTEMIRRKRMSPLYPYPLNRRLILNRLYPLGLLP CCCCCCCCCCCCCCCCHHEEEECHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCHHHHHH ALLPTACYLPLSSLWGIRVHPIDFQTVLYLNRYESPHDSVEWSIQKTCRQFGVTPTSDFS HHHHHHHHHHHHHHCCCEEECCCHHEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCHHH QSFHVQWKQLLNASRLSCDVRSWPHPKHYEEARHHDTRLFQGLQRLILQST HHHHHHHHHHHCHHHCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRFAIDREGDIIDSFTLNRMQAEQLAPFRCPTCQEVLIVKQGVKRRLHFAHIHTCGRAES CCEECCCCCCEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC VTHHQDKWAVCQWLQEKGYPVEQEVTIKNRRADVLTNMDGQHTVFEIQASPLRPEEYAER CCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHCCCCCCEEEEEEECCCCCHHHHHHH TIDYRRAGLDVIWIASGLDLRSNQSFQPWMRLELFQRHRLLTVKNGRLLRFNGFPISIKY HHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCEEEEECCEEEEECCEEEEEEE GIGSWETSSSVNTSPYEAYYRFDAFEWTEMIRRKRMSPLYPYPLNRRLILNRLYPLGLLP CCCCCCCCCCCCCCCCHHEEEECHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCHHHHHH ALLPTACYLPLSSLWGIRVHPIDFQTVLYLNRYESPHDSVEWSIQKTCRQFGVTPTSDFS HHHHHHHHHHHHHHCCCEEECCCHHEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCHHH QSFHVQWKQLLNASRLSCDVRSWPHPKHYEEARHHDTRLFQGLQRLILQST HHHHHHHHHHHCHHHCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA