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The map label for this gene is yrrB [H]

Identifier: 229918431

GI number: 229918431

Start: 2688635

End: 2689294

Strand: Direct

Name: yrrB [H]

Synonym: EAT1b_2718

Alternate gene names: 229918431

Gene position: 2688635-2689294 (Clockwise)

Preceding gene: 229918430

Following gene: 229918433

Centisome position: 89.62

GC content: 54.24

Gene sequence:

>660_bases
ATGAACGCAAACGAACAAGGCATCCAAGCGATGCAGCAAGGTGAATTCGAACAGGCAGCCAAACATTTCAACGAGGCGAT
TGAAGCGAACCCGACGGACCCGACTGGTTTCGTCAACATGGGGACGTTGCTTCAGGCGATCAACGATTACGATCGTGCCG
TCATCTTCTATGACAAAGCGATTGAACTCGATGGATCGTTCGGTGCCGCGCACTATGCGAAAGGTGCCCTTGCCTATGAA
CTTGAGCAATTGGAGTCAGCGGAGGCGTCGCTTCGCCAAGCGCTCCTTTCGGGGATGGACGATGCCGATCTTCACTTCAT
GCTCGGCTTGACGTACAAGGCGATGGGTGACTTCGTTCGTGCGATGCCACGCTTGCGTGAAGCGAAGAAACAATCGCCGG
AAGACGTGGAGATTACATTCCAGTACGGACTTGCCCTCGCGCAAAGTGAACAACTCGAAGAGGCGGTCGTCGCGTTAGAA
GAGACGCTCGACCTTGATGCGAGCCATACGGATGCCCGTTACAACCTAGCAATCGCATATGCGTTCTTGGGTGACCAGGA
ACGGACGTATGCTGAGTTGCAACGCGTCTTAGAGATGCAACCGGATCACGAACTTGCACGTGACGCCGTCGCGAAGATGG
ATGCACTGCTTGGAAACTGA

Upstream 100 bases:

>100_bases
GTCGTCTTTTATGACGGCGACGTCTGTCTCGGTGGGGCAACGATTGACGAAGCGTACCGCAACGGCAAACGACTCGACTA
TATCGGATGAGGTGATTGAT

Downstream 100 bases:

>100_bases
TTACTTGAATAGGAAAGTGCCATCGCTCCATTGCGATGGCACTTTTTTTGTTGACGCGATTAGAGTTGTTTCGTTGTGAT
TTTGACGGGTTCTCCGGCAA

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MNANEQGIQAMQQGEFEQAAKHFNEAIEANPTDPTGFVNMGTLLQAINDYDRAVIFYDKAIELDGSFGAAHYAKGALAYE
LEQLESAEASLRQALLSGMDDADLHFMLGLTYKAMGDFVRAMPRLREAKKQSPEDVEITFQYGLALAQSEQLEEAVVALE
ETLDLDASHTDARYNLAIAYAFLGDQERTYAELQRVLEMQPDHELARDAVAKMDALLGN

Sequences:

>Translated_219_residues
MNANEQGIQAMQQGEFEQAAKHFNEAIEANPTDPTGFVNMGTLLQAINDYDRAVIFYDKAIELDGSFGAAHYAKGALAYE
LEQLESAEASLRQALLSGMDDADLHFMLGLTYKAMGDFVRAMPRLREAKKQSPEDVEITFQYGLALAQSEQLEEAVVALE
ETLDLDASHTDARYNLAIAYAFLGDQERTYAELQRVLEMQPDHELARDAVAKMDALLGN
>Mature_219_residues
MNANEQGIQAMQQGEFEQAAKHFNEAIEANPTDPTGFVNMGTLLQAINDYDRAVIFYDKAIELDGSFGAAHYAKGALAYE
LEQLESAEASLRQALLSGMDDADLHFMLGLTYKAMGDFVRAMPRLREAKKQSPEDVEITFQYGLALAQSEQLEEAVVALE
ETLDLDASHTDARYNLAIAYAFLGDQERTYAELQRVLEMQPDHELARDAVAKMDALLGN

Specific function: Could be an interacting mediator in the complex formation among RNA sulfuration components, RNA processing components, and aminoacyl-tRNA synthetases [H]

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 6 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 24273; Mature: 24273

Theoretical pI: Translated: 4.09; Mature: 4.09

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNANEQGIQAMQQGEFEQAAKHFNEAIEANPTDPTGFVNMGTLLQAINDYDRAVIFYDKA
CCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECE
IELDGSFGAAHYAKGALAYELEQLESAEASLRQALLSGMDDADLHFMLGLTYKAMGDFVR
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
AMPRLREAKKQSPEDVEITFQYGLALAQSEQLEEAVVALEETLDLDASHTDARYNLAIAY
HHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEEEE
AFLGDQERTYAELQRVLEMQPDHELARDAVAKMDALLGN
EECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNANEQGIQAMQQGEFEQAAKHFNEAIEANPTDPTGFVNMGTLLQAINDYDRAVIFYDKA
CCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECE
IELDGSFGAAHYAKGALAYELEQLESAEASLRQALLSGMDDADLHFMLGLTYKAMGDFVR
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
AMPRLREAKKQSPEDVEITFQYGLALAQSEQLEEAVVALEETLDLDASHTDARYNLAIAY
HHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEEEE
AFLGDQERTYAELQRVLEMQPDHELARDAVAKMDALLGN
EECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]