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The map label for this gene is yrvN [H]

Identifier: 229918427

GI number: 229918427

Start: 2684564

End: 2685880

Strand: Reverse

Name: yrvN [H]

Synonym: EAT1b_2714

Alternate gene names: 229918427

Gene position: 2685880-2684564 (Counterclockwise)

Preceding gene: 229918432

Following gene: 229918424

Centisome position: 89.53

GC content: 53.99

Gene sequence:

>1317_bases
ATGCCTGATTTGTTTCATCAATCGAATGGTGGACCGCTCGCGAACCGCATGCGCCCCGAAACGTTAGATGACGTGATCGG
ACAGCGCCATATCATCGGCGAGGGCAAGCTGCTTCGCCGTGCCATCGAAGCCGACCGACTCGGTACGATTATCTTATATG
GTCCACCGGGCACCGGGAAGACGACACTCGCCCGTGTCATTTCGAATTACACGAAAGCGACATTCGTCCAATTGAACGCC
GTCACGGCCAAACTCGATGAATTGCGGAACGTCATTCGTGAAGCGGAGTCCCGGTATGATTATGAGGACGAACGGACGAT
TCTCTTTTTAGATGAGATTCACCGGTTCAATAAGCTCCAGCAGGATGCGCTCCTCCCGGCCCTTGAGTCCGGCAAGCTCG
TCCTCATCGGAGCGACGACCGAAAACCCAAGCTTTGAAGTGAACGCCGCCCTCTTGTCACGGGCGACCGTATTTCGACTT
GAGCCACCTCGTGCCGAGGAGTTACGTACCGTCCTTGAGCGAGCGCTACACGACTCACGTGGTCTCGGAAATTATCCCGT
CAAGATGGATGAAGCTGCTGCAGACCATTATATCAAAATGGCGGATGGTGACTACCGTGTCTTATTGAACGCACTCGAAC
TTGCCGTCTTGACAACGCCTGAGGTGGAAGGACAGATTCATATCACACTTGAGGTCGCGGAAGAGTCGATTCAACAGAAG
TCGATCAAATACGATAAGACGGGTGACCGACATTATGACGTCATCTCGGCGTTCATCAAATCGATTCGTGGGTCTGACCC
GGATGCGGCGCTATACTGGTTAGCCGTCATGATCGAGGCTGGCGAATCGCCACGCTTCATCATGCGTCGCCTTTACGTCC
ATGCCGCCGAAGATATCGGAATGAGCGATCCGAACGCGCTACTCATCGTCGATGCGGCGGCTCGTGCGAGCGAATATATC
GGTTTCCCGGAAGCCCGCATCCCGATTGCCGAGGCTGTTCTCTATTTGGCGACCGCACCGAAATCGAACGCGGTCATCAC
CGCGATTGACAAGGCGCTCCATCACGTCCGGACAGTTGAGGGTGGGCCTGTACCCGTACACCTGCGTGACGCCCATAGTC
CAGGAGCACATGAACTCGGAAACGGGGTCGGATACAAATATCCACATGACGAAAAAGACGGGTTCGTTCCTCAGAACTAC
TGGCCAGAGAATTTGGCTAGAAAACGACCAAATTACTATAAACCGACGCCACGTGGATTCGAGCAACAAATCCAAAAGCG
GCTCGACTATTGGGAAAAACGACGCGACTCGAAATGA

Upstream 100 bases:

>100_bases
TGATCGTTAAGCCATAGCGGCCCTTTGTAGATATTTTCATCTTCAAGTCTCCTTCTGTTATACTAATCGAACAAACGTTT
GTCGAAAGGAATGGTTACGT

Downstream 100 bases:

>100_bases
GCCCGCGTCGTTTTATTTTTGGATGCGATTGATTTCGACGCCCGCTTTTTCAAGCAAGTCGTTAATGACATAGCCGGCAG
CGACAAGCCCTGCAACCGAT

Product: ATPase AAA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 437

Protein sequence:

>438_residues
MPDLFHQSNGGPLANRMRPETLDDVIGQRHIIGEGKLLRRAIEADRLGTIILYGPPGTGKTTLARVISNYTKATFVQLNA
VTAKLDELRNVIREAESRYDYEDERTILFLDEIHRFNKLQQDALLPALESGKLVLIGATTENPSFEVNAALLSRATVFRL
EPPRAEELRTVLERALHDSRGLGNYPVKMDEAAADHYIKMADGDYRVLLNALELAVLTTPEVEGQIHITLEVAEESIQQK
SIKYDKTGDRHYDVISAFIKSIRGSDPDAALYWLAVMIEAGESPRFIMRRLYVHAAEDIGMSDPNALLIVDAAARASEYI
GFPEARIPIAEAVLYLATAPKSNAVITAIDKALHHVRTVEGGPVPVHLRDAHSPGAHELGNGVGYKYPHDEKDGFVPQNY
WPENLARKRPNYYKPTPRGFEQQIQKRLDYWEKRRDSK

Sequences:

>Translated_438_residues
MPDLFHQSNGGPLANRMRPETLDDVIGQRHIIGEGKLLRRAIEADRLGTIILYGPPGTGKTTLARVISNYTKATFVQLNA
VTAKLDELRNVIREAESRYDYEDERTILFLDEIHRFNKLQQDALLPALESGKLVLIGATTENPSFEVNAALLSRATVFRL
EPPRAEELRTVLERALHDSRGLGNYPVKMDEAAADHYIKMADGDYRVLLNALELAVLTTPEVEGQIHITLEVAEESIQQK
SIKYDKTGDRHYDVISAFIKSIRGSDPDAALYWLAVMIEAGESPRFIMRRLYVHAAEDIGMSDPNALLIVDAAARASEYI
GFPEARIPIAEAVLYLATAPKSNAVITAIDKALHHVRTVEGGPVPVHLRDAHSPGAHELGNGVGYKYPHDEKDGFVPQNY
WPENLARKRPNYYKPTPRGFEQQIQKRLDYWEKRRDSK
>Mature_437_residues
PDLFHQSNGGPLANRMRPETLDDVIGQRHIIGEGKLLRRAIEADRLGTIILYGPPGTGKTTLARVISNYTKATFVQLNAV
TAKLDELRNVIREAESRYDYEDERTILFLDEIHRFNKLQQDALLPALESGKLVLIGATTENPSFEVNAALLSRATVFRLE
PPRAEELRTVLERALHDSRGLGNYPVKMDEAAADHYIKMADGDYRVLLNALELAVLTTPEVEGQIHITLEVAEESIQQKS
IKYDKTGDRHYDVISAFIKSIRGSDPDAALYWLAVMIEAGESPRFIMRRLYVHAAEDIGMSDPNALLIVDAAARASEYIG
FPEARIPIAEAVLYLATAPKSNAVITAIDKALHHVRTVEGGPVPVHLRDAHSPGAHELGNGVGYKYPHDEKDGFVPQNYW
PENLARKRPNYYKPTPRGFEQQIQKRLDYWEKRRDSK

Specific function: Unknown

COG id: COG2256

COG function: function code L; ATPase related to the helicase subunit of the Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AAA ATPase family [H]

Homologues:

Organism=Homo sapiens, GI18426902, Length=434, Percent_Identity=42.6267281105991, Blast_Score=317, Evalue=1e-86,
Organism=Homo sapiens, GI18426904, Length=434, Percent_Identity=38.9400921658986, Blast_Score=268, Evalue=6e-72,
Organism=Homo sapiens, GI6677723, Length=218, Percent_Identity=28.8990825688073, Blast_Score=67, Evalue=4e-11,
Organism=Escherichia coli, GI1787119, Length=429, Percent_Identity=44.7552447552448, Blast_Score=339, Evalue=2e-94,
Organism=Saccharomyces cerevisiae, GI6324111, Length=429, Percent_Identity=37.5291375291375, Blast_Score=280, Evalue=4e-76,
Organism=Saccharomyces cerevisiae, GI6324039, Length=272, Percent_Identity=29.0441176470588, Blast_Score=84, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR008824
- InterPro:   IPR021886 [H]

Pfam domain/function: PF12002 MgsA_C; PF05496 RuvB_N [H]

EC number: NA

Molecular weight: Translated: 49162; Mature: 49031

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDLFHQSNGGPLANRMRPETLDDVIGQRHIIGEGKLLRRAIEADRLGTIILYGPPGTGK
CCCCCCCCCCCCCHHCCCCHHHHHHHCCCEECCCHHHHHHHHHHHCCCEEEEECCCCCCH
TTLARVISNYTKATFVQLNAVTAKLDELRNVIREAESRYDYEDERTILFLDEIHRFNKLQ
HHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHH
QDALLPALESGKLVLIGATTENPSFEVNAALLSRATVFRLEPPRAEELRTVLERALHDSR
HHHHCCCCCCCCEEEEEECCCCCCEEEHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHCC
GLGNYPVKMDEAAADHYIKMADGDYRVLLNALELAVLTTPEVEGQIHITLEVAEESIQQK
CCCCCCCCCCCHHCCCEEEECCCCHHHHHHHHHHHEEECCCCCCEEEEEEEHHHHHHHHH
SIKYDKTGDRHYDVISAFIKSIRGSDPDAALYWLAVMIEAGESPRFIMRRLYVHAAEDIG
CCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
MSDPNALLIVDAAARASEYIGFPEARIPIAEAVLYLATAPKSNAVITAIDKALHHVRTVE
CCCCCEEEEEECHHHHHHHCCCCCCCCCHHHHHHHHEECCCCCCCHHHHHHHHHHHHHCC
GGPVPVHLRDAHSPGAHELGNGVGYKYPHDEKDGFVPQNYWPENLARKRPNYYKPTPRGF
CCCEEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCH
EQQIQKRLDYWEKRRDSK
HHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PDLFHQSNGGPLANRMRPETLDDVIGQRHIIGEGKLLRRAIEADRLGTIILYGPPGTGK
CCCCCCCCCCCCHHCCCCHHHHHHHCCCEECCCHHHHHHHHHHHCCCEEEEECCCCCCH
TTLARVISNYTKATFVQLNAVTAKLDELRNVIREAESRYDYEDERTILFLDEIHRFNKLQ
HHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHH
QDALLPALESGKLVLIGATTENPSFEVNAALLSRATVFRLEPPRAEELRTVLERALHDSR
HHHHCCCCCCCCEEEEEECCCCCCEEEHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHCC
GLGNYPVKMDEAAADHYIKMADGDYRVLLNALELAVLTTPEVEGQIHITLEVAEESIQQK
CCCCCCCCCCCHHCCCEEEECCCCHHHHHHHHHHHEEECCCCCCEEEEEEEHHHHHHHHH
SIKYDKTGDRHYDVISAFIKSIRGSDPDAALYWLAVMIEAGESPRFIMRRLYVHAAEDIG
CCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
MSDPNALLIVDAAARASEYIGFPEARIPIAEAVLYLATAPKSNAVITAIDKALHHVRTVE
CCCCCEEEEEECHHHHHHHCCCCCCCCCHHHHHHHHEECCCCCCCHHHHHHHHHHHHHCC
GGPVPVHLRDAHSPGAHELGNGVGYKYPHDEKDGFVPQNYWPENLARKRPNYYKPTPRGF
CCCEEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCH
EQQIQKRLDYWEKRRDSK
HHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]