| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229918373
Identifier: 229918373
GI number: 229918373
Start: 2628998
End: 2630218
Strand: Direct
Name: 229918373
Synonym: EAT1b_2658
Alternate gene names: NA
Gene position: 2628998-2630218 (Clockwise)
Preceding gene: 229918369
Following gene: 229918374
Centisome position: 87.64
GC content: 51.35
Gene sequence:
>1221_bases ATGAAGCGGTATGGGATGCATCTTATCATTTTGATTGGACTCGTCGTACTCGTGACATTACCGACGATCGGACTCGTCAA TTATTTAGACGCGTCCGCTGAGTCGAGTGCTACATATAAAGAAAACACGACGGTCGCGGGTGTCGACGTGTCAGGGATGA CGAAAGAAGAAGCGAACGTTCGTCTTGATAATGCGATTAAAGATTTTAATACGGCACCCTTTTCAATCAATTTAATGGAT GGGACGGTCATGGAGGTTGGCAAAGAGGTCGTGACGTTCGATGTATCGAATACGTTAGACTCCATCAAAGATAAAGGTGC CTATCCTCTATTGACATCTGTAGATGAAACGAAAGTCGAGCCTTATCTCGAAGGTCAGCCTGTGACGTTGACGATGATTG CCCCGGCGTTGATGGATGCCGCATCGATGTTGGAGTCATCTGTGACATTAGAGCAAGTCGCGGCGGAAAGCGAGGTTGTC GCCTCGTTCACCGTGAGCCCGACACCAGCCATGCAGTCAGCACTTGATCGGATGAACGGATTCGAGATGGCGGCGGGAGA TATCTTCAGTCTTAAATCGTTCGGAGAAGATTACGAGGCGCTCACGACACTCGGGTCTTCATTCTACCGCATGTTTGCGG CGACACCGTTCGCCATTCTTGAACGTGTACCGCATGAAACACTTCCTTCCGGGGTGGAACTGGGCTATGACACGAAGGTC GATGAGCGTTCGAACTTTGCTGTTCAAAACCGAGAAGACACATCGTACGCCATCCTCGTCTTGAATGAAGGGGGTTCTGT GACGGTCCAATTGCTCGGGCAACCGTTTGACGCCGCTTTCGAGGCGAGAGTGGAAGAAGTGAAGGCGGTACCGCATCAAA AAGTCGTCCGTTTCTCATCATCGCTCCCATCAGGAAGTTCATCGGTCACCCAGTCAGGTCAAGATGGACAGTCAGGTAAG CTGTATCGTGTCACGGTGACTGAAGAAGGGGAGACGATGGAATTACTCGGGTTTGATTTTTATGCCCCGACACCGGAAAT CGTGACGAAGAGTTCCGTGCCGCTTCCGCCACCAGATCCGGTCGAACCGGTCATTCCGACATTCCCGGATGAGGACGAGG AGGAAGAAGACCCGTTCCCGAATGATTCGAACGACGACCCGTTTGAGGCAGAACCGCCAGTATTAGAAGAAGAACCTGCA GAAGAGGAGGCAGTCGGATGA
Upstream 100 bases:
>100_bases TGAATTAAATGTTATTTTTTGTACAATACATATTATACTAAAGTTATACGCTGAACGGATATATAGAATAGAAGTCGGAT TAGACACGGGGGGATTTTAC
Downstream 100 bases:
>100_bases TCGGCTATTTGATTTTACTCGGCTTTTGGGTACTCGCCACACTGACGCTGTTCGCCTTATCCGTTCCGATGATGCGAAAA CGTGAAACGAAACTTGTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MKRYGMHLIILIGLVVLVTLPTIGLVNYLDASAESSATYKENTTVAGVDVSGMTKEEANVRLDNAIKDFNTAPFSINLMD GTVMEVGKEVVTFDVSNTLDSIKDKGAYPLLTSVDETKVEPYLEGQPVTLTMIAPALMDAASMLESSVTLEQVAAESEVV ASFTVSPTPAMQSALDRMNGFEMAAGDIFSLKSFGEDYEALTTLGSSFYRMFAATPFAILERVPHETLPSGVELGYDTKV DERSNFAVQNREDTSYAILVLNEGGSVTVQLLGQPFDAAFEARVEEVKAVPHQKVVRFSSSLPSGSSSVTQSGQDGQSGK LYRVTVTEEGETMELLGFDFYAPTPEIVTKSSVPLPPPDPVEPVIPTFPDEDEEEEDPFPNDSNDDPFEAEPPVLEEEPA EEEAVG
Sequences:
>Translated_406_residues MKRYGMHLIILIGLVVLVTLPTIGLVNYLDASAESSATYKENTTVAGVDVSGMTKEEANVRLDNAIKDFNTAPFSINLMD GTVMEVGKEVVTFDVSNTLDSIKDKGAYPLLTSVDETKVEPYLEGQPVTLTMIAPALMDAASMLESSVTLEQVAAESEVV ASFTVSPTPAMQSALDRMNGFEMAAGDIFSLKSFGEDYEALTTLGSSFYRMFAATPFAILERVPHETLPSGVELGYDTKV DERSNFAVQNREDTSYAILVLNEGGSVTVQLLGQPFDAAFEARVEEVKAVPHQKVVRFSSSLPSGSSSVTQSGQDGQSGK LYRVTVTEEGETMELLGFDFYAPTPEIVTKSSVPLPPPDPVEPVIPTFPDEDEEEEDPFPNDSNDDPFEAEPPVLEEEPA EEEAVG >Mature_406_residues MKRYGMHLIILIGLVVLVTLPTIGLVNYLDASAESSATYKENTTVAGVDVSGMTKEEANVRLDNAIKDFNTAPFSINLMD GTVMEVGKEVVTFDVSNTLDSIKDKGAYPLLTSVDETKVEPYLEGQPVTLTMIAPALMDAASMLESSVTLEQVAAESEVV ASFTVSPTPAMQSALDRMNGFEMAAGDIFSLKSFGEDYEALTTLGSSFYRMFAATPFAILERVPHETLPSGVELGYDTKV DERSNFAVQNREDTSYAILVLNEGGSVTVQLLGQPFDAAFEARVEEVKAVPHQKVVRFSSSLPSGSSSVTQSGQDGQSGK LYRVTVTEEGETMELLGFDFYAPTPEIVTKSSVPLPPPDPVEPVIPTFPDEDEEEEDPFPNDSNDDPFEAEPPVLEEEPA EEEAVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43870; Mature: 43870
Theoretical pI: Translated: 3.83; Mature: 3.83
Prosite motif: PS51109 G5
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRYGMHLIILIGLVVLVTLPTIGLVNYLDASAESSATYKENTTVAGVDVSGMTKEEANV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCE RLDNAIKDFNTAPFSINLMDGTVMEVGKEVVTFDVSNTLDSIKDKGAYPLLTSVDETKVE EHHHHHHHCCCCCEEEEECCCHHHHCCCEEEEEEHHHHHHHHHHCCCCCEEECCCHHCCC PYLEGQPVTLTMIAPALMDAASMLESSVTLEQVAAESEVVASFTVSPTPAMQSALDRMNG CEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCC FEMAAGDIFSLKSFGEDYEALTTLGSSFYRMFAATPFAILERVPHETLPSGVELGYDTKV CEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHCCCCCCCCCCCCC DERSNFAVQNREDTSYAILVLNEGGSVTVQLLGQPFDAAFEARVEEVKAVPHQKVVRFSS CCCCCCEEECCCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHC SLPSGSSSVTQSGQDGQSGKLYRVTVTEEGETMELLGFDFYAPTPEIVTKSSVPLPPPDP CCCCCCCHHHCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCHHHEECCCCCCCCCCC VEPVIPTFPDEDEEEEDPFPNDSNDDPFEAEPPVLEEEPAEEEAVG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCC >Mature Secondary Structure MKRYGMHLIILIGLVVLVTLPTIGLVNYLDASAESSATYKENTTVAGVDVSGMTKEEANV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCE RLDNAIKDFNTAPFSINLMDGTVMEVGKEVVTFDVSNTLDSIKDKGAYPLLTSVDETKVE EHHHHHHHCCCCCEEEEECCCHHHHCCCEEEEEEHHHHHHHHHHCCCCCEEECCCHHCCC PYLEGQPVTLTMIAPALMDAASMLESSVTLEQVAAESEVVASFTVSPTPAMQSALDRMNG CEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCC FEMAAGDIFSLKSFGEDYEALTTLGSSFYRMFAATPFAILERVPHETLPSGVELGYDTKV CEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHCCCCCCCCCCCCC DERSNFAVQNREDTSYAILVLNEGGSVTVQLLGQPFDAAFEARVEEVKAVPHQKVVRFSS CCCCCCEEECCCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHC SLPSGSSSVTQSGQDGQSGKLYRVTVTEEGETMELLGFDFYAPTPEIVTKSSVPLPPPDP CCCCCCCHHHCCCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCHHHEECCCCCCCCCCC VEPVIPTFPDEDEEEEDPFPNDSNDDPFEAEPPVLEEEPAEEEAVG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA