| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229918316
Identifier: 229918316
GI number: 229918316
Start: 2570471
End: 2571994
Strand: Direct
Name: 229918316
Synonym: EAT1b_2601
Alternate gene names: NA
Gene position: 2570471-2571994 (Clockwise)
Preceding gene: 229918315
Following gene: 229918322
Centisome position: 85.69
GC content: 33.14
Gene sequence:
>1524_bases ATGAATGAAATTACTGAAGTTACATTAACAGTTACCGAAGGTGTTTTTAAAGGATTAGCTAAACAAAATCTACTATTCCA TCAATGTATTATTGAATTGACTGATAATGCGATTGCTGCCTCAATTCCTAATAATAGTTTTCATATCGACATACAGTTAC TTAAAACAGAAGAAAGTGATGAGTTAATTGATTTGTATATAGGGGATAGAGGAAGAGGGATGAACATTGAAGTACTGTCA AAAGCATTGCAATTGGGGAAATCTGCTACGGAGGATAACAGACTAAACGAGCATGGTTTTGGTCTGAAAAATGCATTAGC CACTTTAACTGGAGGTCATAGAAAATTTAAGATTTGGACAACGAGTAATAAAAACGAAGTCCACAGTGTGGATGGACCAT TTCGTCATCAAATGCAAATAATAACAAAGAATACATGTATGCCTGATATACCTAAATTAGGTAATGATTATAGTACCATT ATATTTGCACAAGTGAGTAGAGAATTTCTTAAAACGCTTCAAGGTAGAGGAGCAAAAACTCAGAATCTCTCTCCTTTAAG ACTATGGCTTATCGAACATCTTGGTGTAACTTATCGTGGATATTTAAATATAAATCAAGATACAGGTCTTCCCTATGGTA ATATATTTGTTTATATCGATGAGGATAGGAAAAGAGTGCCTTCAATAAAATTACCGTTGGCCAATGGTTATACGGAACGC TTTAATATTGAATTAGACGGAATAGAGTATGAACTTCTTTACAGGTATGGAACTCTGGATAAATACGAAACCCGAAAAAT GTTATTTGGTGGAAAGTTGAAGTATTATTATCAAGGAAATCAATCCACTCAAGGTATTGATATACAATTAGGTAAACGTA CAATTGCTACTAGACAATTTGAAAATATATGGAGGAGACAAACGAAAAATCTAGAACTTTTAGATGAACCAATTAGCAGG CACAATAGCTATAATGATTTTATTGGTGAACTAATTATTCCTGACTTACCACGGAATGTACTTACTACAGTGAATAATAA AACAGACTTTAATTTAGATGATCCAGATTGGATAAAAATCTTTAACAAACTTAATGAGTTTAGGCCAATTAAAAATGTGA GAGAGACTACTGAAAAGGAATTAGTAGCAAAGTTAGCTGATCGAATAGTTTCAATTCCATCTGGCGACTCGGTTAGTACT GAAACGAGTGTTTGGTATAGTGGGACTCAAATAGATTTATATCATAAGAAAAAATCTGGAGAGATAATAATATATGAGGT GAAAATTGGAAAAGGTGCGCCGCTAGATGTTTATCAATTAAAGATGTATTGGGATGGACTACTAAACGAAGGAGTCCAAC CTGATGAGGGGTATTTACTTGTTGAGTCCAAAGACTCTAATTTAGAAAGGATGGTTGATGACATAAATAAACTTTTTTCT CCTATGGCTCCAAGAAACACAACTCAACATAAACCTTATAATCTAAAAATAATAACTCATCATGAAATAGGTTTGGATAG ATGA
Upstream 100 bases:
>100_bases TTCATAGTTGAAAGATACACTAGTTTTAAGAGAAATTCTGTGTAAAATATTTTTCTTTTCTAGGGTATATATAAATATTC CATGTAGGAGGAAGGAAATC
Downstream 100 bases:
>100_bases ACGTATACATGAGATATATTTGTTTGAAGAATGTTAGTGAAGATAATAAAGTAATTAAAAAGGGGATGAATGTCCAATTT ATGACATTCATCCCCTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 507; Mature: 507
Protein sequence:
>507_residues MNEITEVTLTVTEGVFKGLAKQNLLFHQCIIELTDNAIAASIPNNSFHIDIQLLKTEESDELIDLYIGDRGRGMNIEVLS KALQLGKSATEDNRLNEHGFGLKNALATLTGGHRKFKIWTTSNKNEVHSVDGPFRHQMQIITKNTCMPDIPKLGNDYSTI IFAQVSREFLKTLQGRGAKTQNLSPLRLWLIEHLGVTYRGYLNINQDTGLPYGNIFVYIDEDRKRVPSIKLPLANGYTER FNIELDGIEYELLYRYGTLDKYETRKMLFGGKLKYYYQGNQSTQGIDIQLGKRTIATRQFENIWRRQTKNLELLDEPISR HNSYNDFIGELIIPDLPRNVLTTVNNKTDFNLDDPDWIKIFNKLNEFRPIKNVRETTEKELVAKLADRIVSIPSGDSVST ETSVWYSGTQIDLYHKKKSGEIIIYEVKIGKGAPLDVYQLKMYWDGLLNEGVQPDEGYLLVESKDSNLERMVDDINKLFS PMAPRNTTQHKPYNLKIITHHEIGLDR
Sequences:
>Translated_507_residues MNEITEVTLTVTEGVFKGLAKQNLLFHQCIIELTDNAIAASIPNNSFHIDIQLLKTEESDELIDLYIGDRGRGMNIEVLS KALQLGKSATEDNRLNEHGFGLKNALATLTGGHRKFKIWTTSNKNEVHSVDGPFRHQMQIITKNTCMPDIPKLGNDYSTI IFAQVSREFLKTLQGRGAKTQNLSPLRLWLIEHLGVTYRGYLNINQDTGLPYGNIFVYIDEDRKRVPSIKLPLANGYTER FNIELDGIEYELLYRYGTLDKYETRKMLFGGKLKYYYQGNQSTQGIDIQLGKRTIATRQFENIWRRQTKNLELLDEPISR HNSYNDFIGELIIPDLPRNVLTTVNNKTDFNLDDPDWIKIFNKLNEFRPIKNVRETTEKELVAKLADRIVSIPSGDSVST ETSVWYSGTQIDLYHKKKSGEIIIYEVKIGKGAPLDVYQLKMYWDGLLNEGVQPDEGYLLVESKDSNLERMVDDINKLFS PMAPRNTTQHKPYNLKIITHHEIGLDR >Mature_507_residues MNEITEVTLTVTEGVFKGLAKQNLLFHQCIIELTDNAIAASIPNNSFHIDIQLLKTEESDELIDLYIGDRGRGMNIEVLS KALQLGKSATEDNRLNEHGFGLKNALATLTGGHRKFKIWTTSNKNEVHSVDGPFRHQMQIITKNTCMPDIPKLGNDYSTI IFAQVSREFLKTLQGRGAKTQNLSPLRLWLIEHLGVTYRGYLNINQDTGLPYGNIFVYIDEDRKRVPSIKLPLANGYTER FNIELDGIEYELLYRYGTLDKYETRKMLFGGKLKYYYQGNQSTQGIDIQLGKRTIATRQFENIWRRQTKNLELLDEPISR HNSYNDFIGELIIPDLPRNVLTTVNNKTDFNLDDPDWIKIFNKLNEFRPIKNVRETTEKELVAKLADRIVSIPSGDSVST ETSVWYSGTQIDLYHKKKSGEIIIYEVKIGKGAPLDVYQLKMYWDGLLNEGVQPDEGYLLVESKDSNLERMVDDINKLFS PMAPRNTTQHKPYNLKIITHHEIGLDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58181; Mature: 58181
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEITEVTLTVTEGVFKGLAKQNLLFHQCIIELTDNAIAASIPNNSFHIDIQLLKTEESD CCCCEEEEEEEHHHHHHHHHHCCHHHHHHHHHHCCCEEEEECCCCCEEEEEEEEECCCCC ELIDLYIGDRGRGMNIEVLSKALQLGKSATEDNRLNEHGFGLKNALATLTGGHRKFKIWT CEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEE TSNKNEVHSVDGPFRHQMQIITKNTCMPDIPKLGNDYSTIIFAQVSREFLKTLQGRGAKT CCCCCCEECCCCCHHHEEEEEECCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCC QNLSPLRLWLIEHLGVTYRGYLNINQDTGLPYGNIFVYIDEDRKRVPSIKLPLANGYTER CCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCEE FNIELDGIEYELLYRYGTLDKYETRKMLFGGKLKYYYQGNQSTQGIDIQLGKRTIATRQF EEEEECCCEEEEEEEECCCCCHHHHHHHCCCEEEEEEECCCCCCCEEEEECCHHHHHHHH ENIWRRQTKNLELLDEPISRHNSYNDFIGELIIPDLPRNVLTTVNNKTDFNLDDPDWIKI HHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCHHHHHH FNKLNEFRPIKNVRETTEKELVAKLADRIVSIPSGDSVSTETSVWYSGTQIDLYHKKKSG HHHHHHCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEEECCCEEEEEEECCCC EIIIYEVKIGKGAPLDVYQLKMYWDGLLNEGVQPDEGYLLVESKDSNLERMVDDINKLFS CEEEEEEEECCCCCCCCEEHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHC PMAPRNTTQHKPYNLKIITHHEIGLDR CCCCCCCCCCCCEEEEEEEECCCCCCC >Mature Secondary Structure MNEITEVTLTVTEGVFKGLAKQNLLFHQCIIELTDNAIAASIPNNSFHIDIQLLKTEESD CCCCEEEEEEEHHHHHHHHHHCCHHHHHHHHHHCCCEEEEECCCCCEEEEEEEEECCCCC ELIDLYIGDRGRGMNIEVLSKALQLGKSATEDNRLNEHGFGLKNALATLTGGHRKFKIWT CEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEE TSNKNEVHSVDGPFRHQMQIITKNTCMPDIPKLGNDYSTIIFAQVSREFLKTLQGRGAKT CCCCCCEECCCCCHHHEEEEEECCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCC QNLSPLRLWLIEHLGVTYRGYLNINQDTGLPYGNIFVYIDEDRKRVPSIKLPLANGYTER CCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCEE FNIELDGIEYELLYRYGTLDKYETRKMLFGGKLKYYYQGNQSTQGIDIQLGKRTIATRQF EEEEECCCEEEEEEEECCCCCHHHHHHHCCCEEEEEEECCCCCCCEEEEECCHHHHHHHH ENIWRRQTKNLELLDEPISRHNSYNDFIGELIIPDLPRNVLTTVNNKTDFNLDDPDWIKI HHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCHHHHHH FNKLNEFRPIKNVRETTEKELVAKLADRIVSIPSGDSVSTETSVWYSGTQIDLYHKKKSG HHHHHHCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEEECCCEEEEEEECCCC EIIIYEVKIGKGAPLDVYQLKMYWDGLLNEGVQPDEGYLLVESKDSNLERMVDDINKLFS CEEEEEEEECCCCCCCCEEHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHC PMAPRNTTQHKPYNLKIITHHEIGLDR CCCCCCCCCCCCEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA