| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is cwlO [H]
Identifier: 229918283
GI number: 229918283
Start: 2525974
End: 2527269
Strand: Direct
Name: cwlO [H]
Synonym: EAT1b_2566
Alternate gene names: 229918283
Gene position: 2525974-2527269 (Clockwise)
Preceding gene: 229918282
Following gene: 229918287
Centisome position: 84.2
GC content: 48.3
Gene sequence:
>1296_bases TTGGGTAACTTGAAGAAATTTGCAGCTACAGTCACTCTAGGCGCACTCTTGATCGGCGGAACGTCACCGACTTATGCAGC CTCACTTACAGAGAAGCAGAAGAAAGTACAAGAACAACGACAAAAGAATAGCAGTGAACAGTCGAAAGCAAACTCTTCGA TTCAATCACGTGAGCAAGCCATCAGCAAAGAGCAGCAAGAGATCAACAAGTTAGATGCTGAACTCCAAGACGTCATCAAC GATGTCGCTCAGAAAAAAGCTGAGATTCGTGCAACTGAAGAAAAAATTAAAAAGCTTCAAGCACAAATTAAAAAGTACGA AGCGAAAATGAAGGCACAAGAAGATCTTATGAAAGATCGTATGGCGACGATGCAAAAGAACGGCGGCTCGTCAGTCAACT GGGCTGAGTTCATCTTCGGTTCTAAAGACTTCGGTGATTTGATCACACGCATGATCACAGCTGGTACGATTCAAGAGAAC GACCAACAGATCTTCGAAGAGTATGAAGCAACGAAAGAAAAACTTGCGAAAGCGCAAGCTGATTTGAAAGCAGAGCGCGA TTCACTCGTGAAGCAAAAAGAAGATCTTGAAAAACGTCAGAAAGAGCTCGATCAAAAAATGAAAGAGCGCGCTGCGAAAA TCAAGAAACTTGAAGCTGAAAAAGTGAAGTTCGAATCAAAACTTATGAGCCTTCAAGAGATGGAAGATACGCTCAAAGCT CAAGAACAAGCCATTCAAGCAGAAATCGAAGCGCAACGTCGTGCTGAAGAAGAAGCACGTCGTGCAGCGGCAGCAGCTGC GGCAGCGAAAAAACAACAAGGTTCAAGCTCGAACAGCGGTTCAAGTGCTTCAACAGCACCGGTAGCGTCTGCACCAGCAA GCGGTGGTATGTTCCAACGCCCAGCAAGCGGTCGCCTCTCACAAGGATGGGGTCCAGCAAGCGGTGCGAACGGCTACTCG TTCCACAACGGTCTTGATATCGCAGGTCCAGTCGGTACACCGATCTATGCAGCACAAACTGGTACGGTCCTCCGTGCAGG TTGGGGTGGCGCATACGGAAACCACGTCATGATTGCACACGTGATCAACGGGCAAGTATGGACGACAGTATACGCTCACA TGAGCTCGGTATCCGTTTCTGCGGGTCAACGCGTGTCACAAGGACAAAACCTTGGCGGCATGGGTAGCACAGGGAACTCG ACAGGTTCACACCTTCACTTCGAGATTCACCGTGGCGGCTACTCGTACTCTTCATCGAGCGCGGGAAGCACAGTCAACCC AGCATCATTCTTCTAA
Upstream 100 bases:
>100_bases ATGAGTCACAGAGCGAACGAAATGTCGCGACTTATCTTATTAAAAAATTACTGCACGACTATAGATAAAAACTACACGGG AATCAGCGGAGGGAAGCACA
Downstream 100 bases:
>100_bases ACACAAAGACAGTGATCGACGAACGCGTCGATCACTTTTTTGTTGCCTGATAGACGATGAACGTCAAAAGGGCGGCACCG ATGACACTGAGCCATAGCGT
Product: peptidase M23
Products: NA
Alternate protein names: D-gamma-glutamyl-meso-diaminopimelyl DL-endopeptidase [H]
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MGNLKKFAATVTLGALLIGGTSPTYAASLTEKQKKVQEQRQKNSSEQSKANSSIQSREQAISKEQQEINKLDAELQDVIN DVAQKKAEIRATEEKIKKLQAQIKKYEAKMKAQEDLMKDRMATMQKNGGSSVNWAEFIFGSKDFGDLITRMITAGTIQEN DQQIFEEYEATKEKLAKAQADLKAERDSLVKQKEDLEKRQKELDQKMKERAAKIKKLEAEKVKFESKLMSLQEMEDTLKA QEQAIQAEIEAQRRAEEEARRAAAAAAAAKKQQGSSSNSGSSASTAPVASAPASGGMFQRPASGRLSQGWGPASGANGYS FHNGLDIAGPVGTPIYAAQTGTVLRAGWGGAYGNHVMIAHVINGQVWTTVYAHMSSVSVSAGQRVSQGQNLGGMGSTGNS TGSHLHFEIHRGGYSYSSSSAGSTVNPASFF
Sequences:
>Translated_431_residues MGNLKKFAATVTLGALLIGGTSPTYAASLTEKQKKVQEQRQKNSSEQSKANSSIQSREQAISKEQQEINKLDAELQDVIN DVAQKKAEIRATEEKIKKLQAQIKKYEAKMKAQEDLMKDRMATMQKNGGSSVNWAEFIFGSKDFGDLITRMITAGTIQEN DQQIFEEYEATKEKLAKAQADLKAERDSLVKQKEDLEKRQKELDQKMKERAAKIKKLEAEKVKFESKLMSLQEMEDTLKA QEQAIQAEIEAQRRAEEEARRAAAAAAAAKKQQGSSSNSGSSASTAPVASAPASGGMFQRPASGRLSQGWGPASGANGYS FHNGLDIAGPVGTPIYAAQTGTVLRAGWGGAYGNHVMIAHVINGQVWTTVYAHMSSVSVSAGQRVSQGQNLGGMGSTGNS TGSHLHFEIHRGGYSYSSSSAGSTVNPASFF >Mature_430_residues GNLKKFAATVTLGALLIGGTSPTYAASLTEKQKKVQEQRQKNSSEQSKANSSIQSREQAISKEQQEINKLDAELQDVIND VAQKKAEIRATEEKIKKLQAQIKKYEAKMKAQEDLMKDRMATMQKNGGSSVNWAEFIFGSKDFGDLITRMITAGTIQEND QQIFEEYEATKEKLAKAQADLKAERDSLVKQKEDLEKRQKELDQKMKERAAKIKKLEAEKVKFESKLMSLQEMEDTLKAQ EQAIQAEIEAQRRAEEEARRAAAAAAAAKKQQGSSSNSGSSASTAPVASAPASGGMFQRPASGRLSQGWGPASGANGYSF HNGLDIAGPVGTPIYAAQTGTVLRAGWGGAYGNHVMIAHVINGQVWTTVYAHMSSVSVSAGQRVSQGQNLGGMGSTGNST GSHLHFEIHRGGYSYSSSSAGSTVNPASFF
Specific function: Shows a cell wall hydrolytic DL-endopeptidase activity [H]
COG id: COG0739
COG function: function code M; Membrane proteins related to metalloendopeptidases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase C40 family [H]
Homologues:
Organism=Escherichia coli, GI87081989, Length=88, Percent_Identity=42.0454545454545, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI87082174, Length=131, Percent_Identity=36.6412213740458, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000064 [H]
Pfam domain/function: PF00877 NLPC_P60 [H]
EC number: 3.4.24.- [C]
Molecular weight: Translated: 46551; Mature: 46419
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNLKKFAATVTLGALLIGGTSPTYAASLTEKQKKVQEQRQKNSSEQSKANSSIQSREQA CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH ISKEQQEINKLDAELQDVINDVAQKKAEIRATEEKIKKLQAQIKKYEAKMKAQEDLMKDR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MATMQKNGGSSVNWAEFIFGSKDFGDLITRMITAGTIQENDQQIFEEYEATKEKLAKAQA HHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH DLKAERDSLVKQKEDLEKRQKELDQKMKERAAKIKKLEAEKVKFESKLMSLQEMEDTLKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QEQAIQAEIEAQRRAEEEARRAAAAAAAAKKQQGSSSNSGSSASTAPVASAPASGGMFQR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC PASGRLSQGWGPASGANGYSFHNGLDIAGPVGTPIYAAQTGTVLRAGWGGAYGNHVMIAH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEECCCCCCCCCCEEEEE VINGQVWTTVYAHMSSVSVSAGQRVSQGQNLGGMGSTGNSTGSHLHFEIHRGGYSYSSSS EECCHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCC AGSTVNPASFF CCCCCCCCCCC >Mature Secondary Structure GNLKKFAATVTLGALLIGGTSPTYAASLTEKQKKVQEQRQKNSSEQSKANSSIQSREQA CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH ISKEQQEINKLDAELQDVINDVAQKKAEIRATEEKIKKLQAQIKKYEAKMKAQEDLMKDR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MATMQKNGGSSVNWAEFIFGSKDFGDLITRMITAGTIQENDQQIFEEYEATKEKLAKAQA HHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH DLKAERDSLVKQKEDLEKRQKELDQKMKERAAKIKKLEAEKVKFESKLMSLQEMEDTLKA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QEQAIQAEIEAQRRAEEEARRAAAAAAAAKKQQGSSSNSGSSASTAPVASAPASGGMFQR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC PASGRLSQGWGPASGANGYSFHNGLDIAGPVGTPIYAAQTGTVLRAGWGGAYGNHVMIAH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEECCCCCCCCCCEEEEE VINGQVWTTVYAHMSSVSVSAGQRVSQGQNLGGMGSTGNSTGSHLHFEIHRGGYSYSSSS EECCHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCC AGSTVNPASFF CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA