| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229918265
Identifier: 229918265
GI number: 229918265
Start: 2509716
End: 2510330
Strand: Direct
Name: 229918265
Synonym: EAT1b_2548
Alternate gene names: NA
Gene position: 2509716-2510330 (Clockwise)
Preceding gene: 229918264
Following gene: 229918269
Centisome position: 83.66
GC content: 26.18
Gene sequence:
>615_bases TTGATTGATCCGTGGATAATAGTAAGCTCACTCTTGTCAGCAATTTTTGTTACAGTTGTTCGCAATGTAAATGAATATTT TAAAGACAAGATTAAAGTGAGGAAGGCAAAAAAATTACTAGGTAAGGAATTAAAAGATAATTTACTTTACCTGTCTCGTA CGGTGAAAGTCTTGAAAATCTTTAATGACATAAATATTATAATTCTAAGTGATGAAGACTTTAAAGAAAATTACTGTAGT GATGAAAAGATGAAAGAGTTGATGAAGTCTATATCCATTGAAGCAGACAGACATCTTAATTTAATTTCAGTTTTAGTATA TAAAGAAATCTTTTTAAAGAGTAATCGTAATTTTGATTCTAAACAAGATGAACTTTTGCATGAAATATATTTTTATATAT TAAAAGTCGAAAATTACAAATCTATAATTTTATCGAATAAAGATAATAAAGATATAAAAAGATTATACGAACTATACTTT AAAGTATGGGAAATTTCAAATAATATAATGTCTCTATGTGATGATGACTTAATTAAAAATCTTATTAGAAGTGAAGTTGA ATGTGCTGTTAATAATGAGTTAAATGCTATTGAGCAAACGAGCGTAGAGCAGTGA
Upstream 100 bases:
>100_bases CAGATATGGTAACAGCGTTAATAGAGATGAAAAACCGTCCATCTTTCTTTAAACCAAGTTATGAAAAATGGAAAAACGAT CTATTGGAGAGTAGAAAAAA
Downstream 100 bases:
>100_bases ACTGAAGTTAACTATTTTTACCGTGATTAGAAAAAACGTCCGTTTCAGACGAAATGAAATGAACGTTTTGTTGTATCATC AACTGTAATGAAAAGGATGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MIDPWIIVSSLLSAIFVTVVRNVNEYFKDKIKVRKAKKLLGKELKDNLLYLSRTVKVLKIFNDINIIILSDEDFKENYCS DEKMKELMKSISIEADRHLNLISVLVYKEIFLKSNRNFDSKQDELLHEIYFYILKVENYKSIILSNKDNKDIKRLYELYF KVWEISNNIMSLCDDDLIKNLIRSEVECAVNNELNAIEQTSVEQ
Sequences:
>Translated_204_residues MIDPWIIVSSLLSAIFVTVVRNVNEYFKDKIKVRKAKKLLGKELKDNLLYLSRTVKVLKIFNDINIIILSDEDFKENYCS DEKMKELMKSISIEADRHLNLISVLVYKEIFLKSNRNFDSKQDELLHEIYFYILKVENYKSIILSNKDNKDIKRLYELYF KVWEISNNIMSLCDDDLIKNLIRSEVECAVNNELNAIEQTSVEQ >Mature_204_residues MIDPWIIVSSLLSAIFVTVVRNVNEYFKDKIKVRKAKKLLGKELKDNLLYLSRTVKVLKIFNDINIIILSDEDFKENYCS DEKMKELMKSISIEADRHLNLISVLVYKEIFLKSNRNFDSKQDELLHEIYFYILKVENYKSIILSNKDNKDIKRLYELYF KVWEISNNIMSLCDDDLIKNLIRSEVECAVNNELNAIEQTSVEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24128; Mature: 24128
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDPWIIVSSLLSAIFVTVVRNVNEYFKDKIKVRKAKKLLGKELKDNLLYLSRTVKVLKI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FNDINIIILSDEDFKENYCSDEKMKELMKSISIEADRHLNLISVLVYKEIFLKSNRNFDS HCCCEEEEECCCCHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCC KQDELLHEIYFYILKVENYKSIILSNKDNKDIKRLYELYFKVWEISNNIMSLCDDDLIKN HHHHHHHHHHHHHHHHCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIRSEVECAVNNELNAIEQTSVEQ HHHHHHHHHHCCCCHHHHHHCCCC >Mature Secondary Structure MIDPWIIVSSLLSAIFVTVVRNVNEYFKDKIKVRKAKKLLGKELKDNLLYLSRTVKVLKI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FNDINIIILSDEDFKENYCSDEKMKELMKSISIEADRHLNLISVLVYKEIFLKSNRNFDS HCCCEEEEECCCCHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCC KQDELLHEIYFYILKVENYKSIILSNKDNKDIKRLYELYFKVWEISNNIMSLCDDDLIKN HHHHHHHHHHHHHHHHCCHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIRSEVECAVNNELNAIEQTSVEQ HHHHHHHHHHCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA