| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is kat [H]
Identifier: 229918244
GI number: 229918244
Start: 2486243
End: 2487712
Strand: Direct
Name: kat [H]
Synonym: EAT1b_2525
Alternate gene names: 229918244
Gene position: 2486243-2487712 (Clockwise)
Preceding gene: 229918243
Following gene: 229918246
Centisome position: 82.88
GC content: 50.54
Gene sequence:
>1470_bases ATGGATCAACACCGTCAACTAACTACTAACCAAGGCGTACCAATCGGGGATAACGCCAACTCCATCACTGCGGGTCGTCG GGGCCCGACGCTTCTCGAAGACTACCAACTAATTGAGAAATTAGCGCATTTCGATCGTGAACGTGTACCAGAACGAGTCG TTCATGCAAGAGGCGCAGGGGCACATGGTGTCTTCACTGTAAAAAATAGTATGAAACGATATACAAAAGCCGCATTCTTG CAAGAAGAGGGGCAAGAGACGCCTGTATTTGCACGTTTCTCGACCGTCATCCACGGATTGGGTTCACCGGAGACACTTCG TGACCCACGCGGTTTTGCCGTCAAGTTTTATACGGAAGAAGGGAACTATGACTTCGTCGGAAACAACTTACCGGTCTTCT TCATCCGTGACGCGATTAAATTCCCAGATGTGATTCACTCGCTCAAGCCGGACCCACAAACGAACCTTCAAGACCCGGAC CGCTTCTTCGACTTCATGTCGCTTACGCCTGAATCAACGAACATGCTTCTTCATTTATTCAGTGACGAAGGCATCCCGGC ATCGTATCGCCATATGCGCGGCTCATCTGTCCATTCCTTCAAGTGGGTGAATGAATTCGGCAACACGGTGTACATAAAGA TGCGCTGGGTACCGAAGCAAGGCATTCAAAACTTGTCGATGGAAGAAGCGGCGAAAATCCAAGCGGAAGACTTCAACCAT GCGACACGTGACTTGTTCAACGCGATTGAAAATGGAGACTATCCGGAATGGGATCTATATGTACAGATTTTAGACCCGGC GGACATGGACAACTTTGATTTCGACCCGCTCGATGCCACAAAGGATTGGTTCGAAGATGTCATCCCGTATCAATTGGTCG GAACGATGACCCTCAATAAAAACGTCGACAACTTCTTCGCCGAGACAGAATCTGTCGGCTTCAACCCGGGTGTTCTCGTT CCAGGGATCCAGCCGTCAGAAGACAAGATGCTCCAAGGACGACTCTTCTCGTATTCGGATACGCAGCGTCACCGTATCGG ACCGAACTATCTCCAACTTCCGATCAACTGCCCGTTCGCTCAAGTCGCGAACAACCAGCGTGACGGGGCGATGCCGTTTA AGCAACAGACGAGCCCGGTCAACTACGAGCCGAACCGTTACGAAGACGCGCCGAAGCCGAATGCGGACTATATTGAGACA CCGCAACCGATCACAGGCGTGACGGGTCGTCAGAAGATTGAGAAGACGAACGATTTCGGTCAAGCGGGAGAAGTGTATCG CCGCTATTCTCAAGAAGAGAAGGATGCGCTCATCCGTAACCTCGTCGCTCACATCAAAGAAGTTCGTCATGAGAAGACCG TTCTCCTCTTGATTTGCAACTTCTATCGTGCAGACCGTGAACTCGGGGAGCGTCTCTCGAATGAGTTGAACGTCGATCTC GCACCATTCTTGAATCAAATGTCGAACTAA
Upstream 100 bases:
>100_bases TGAAAAAAAGTTCGTGATTCACGAGCTTTTTATTTGTAATCATTCTAATCTTTGATTAATATCAAGATTGTAATGATTAT AAATAATGGGAGGCAATCAT
Downstream 100 bases:
>100_bases ACATGTAACCGCGGTCTTGTACCGCGGTTTTTTGTATGCGAAAAGACGTTCCTCTCATTGAGAAACGTCTCGTCAATCGT GGTTATTCACCGACCATCCC
Product: Catalase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 489; Mature: 489
Protein sequence:
>489_residues MDQHRQLTTNQGVPIGDNANSITAGRRGPTLLEDYQLIEKLAHFDRERVPERVVHARGAGAHGVFTVKNSMKRYTKAAFL QEEGQETPVFARFSTVIHGLGSPETLRDPRGFAVKFYTEEGNYDFVGNNLPVFFIRDAIKFPDVIHSLKPDPQTNLQDPD RFFDFMSLTPESTNMLLHLFSDEGIPASYRHMRGSSVHSFKWVNEFGNTVYIKMRWVPKQGIQNLSMEEAAKIQAEDFNH ATRDLFNAIENGDYPEWDLYVQILDPADMDNFDFDPLDATKDWFEDVIPYQLVGTMTLNKNVDNFFAETESVGFNPGVLV PGIQPSEDKMLQGRLFSYSDTQRHRIGPNYLQLPINCPFAQVANNQRDGAMPFKQQTSPVNYEPNRYEDAPKPNADYIET PQPITGVTGRQKIEKTNDFGQAGEVYRRYSQEEKDALIRNLVAHIKEVRHEKTVLLLICNFYRADRELGERLSNELNVDL APFLNQMSN
Sequences:
>Translated_489_residues MDQHRQLTTNQGVPIGDNANSITAGRRGPTLLEDYQLIEKLAHFDRERVPERVVHARGAGAHGVFTVKNSMKRYTKAAFL QEEGQETPVFARFSTVIHGLGSPETLRDPRGFAVKFYTEEGNYDFVGNNLPVFFIRDAIKFPDVIHSLKPDPQTNLQDPD RFFDFMSLTPESTNMLLHLFSDEGIPASYRHMRGSSVHSFKWVNEFGNTVYIKMRWVPKQGIQNLSMEEAAKIQAEDFNH ATRDLFNAIENGDYPEWDLYVQILDPADMDNFDFDPLDATKDWFEDVIPYQLVGTMTLNKNVDNFFAETESVGFNPGVLV PGIQPSEDKMLQGRLFSYSDTQRHRIGPNYLQLPINCPFAQVANNQRDGAMPFKQQTSPVNYEPNRYEDAPKPNADYIET PQPITGVTGRQKIEKTNDFGQAGEVYRRYSQEEKDALIRNLVAHIKEVRHEKTVLLLICNFYRADRELGERLSNELNVDL APFLNQMSN >Mature_489_residues MDQHRQLTTNQGVPIGDNANSITAGRRGPTLLEDYQLIEKLAHFDRERVPERVVHARGAGAHGVFTVKNSMKRYTKAAFL QEEGQETPVFARFSTVIHGLGSPETLRDPRGFAVKFYTEEGNYDFVGNNLPVFFIRDAIKFPDVIHSLKPDPQTNLQDPD RFFDFMSLTPESTNMLLHLFSDEGIPASYRHMRGSSVHSFKWVNEFGNTVYIKMRWVPKQGIQNLSMEEAAKIQAEDFNH ATRDLFNAIENGDYPEWDLYVQILDPADMDNFDFDPLDATKDWFEDVIPYQLVGTMTLNKNVDNFFAETESVGFNPGVLV PGIQPSEDKMLQGRLFSYSDTQRHRIGPNYLQLPINCPFAQVANNQRDGAMPFKQQTSPVNYEPNRYEDAPKPNADYIET PQPITGVTGRQKIEKTNDFGQAGEVYRRYSQEEKDALIRNLVAHIKEVRHEKTVLLLICNFYRADRELGERLSNELNVDL APFLNQMSN
Specific function: Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide [H]
COG id: COG0753
COG function: function code P; Catalase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the catalase family [H]
Homologues:
Organism=Homo sapiens, GI4557014, Length=446, Percent_Identity=48.4304932735426, Blast_Score=429, Evalue=1e-120, Organism=Escherichia coli, GI48994891, Length=426, Percent_Identity=48.1220657276995, Blast_Score=388, Evalue=1e-109, Organism=Caenorhabditis elegans, GI71998444, Length=468, Percent_Identity=44.8717948717949, Blast_Score=430, Evalue=1e-121, Organism=Caenorhabditis elegans, GI25147792, Length=472, Percent_Identity=44.9152542372881, Blast_Score=429, Evalue=1e-120, Organism=Caenorhabditis elegans, GI25151141, Length=472, Percent_Identity=44.9152542372881, Blast_Score=429, Evalue=1e-120, Organism=Saccharomyces cerevisiae, GI6320462, Length=372, Percent_Identity=46.505376344086, Blast_Score=341, Evalue=1e-94, Organism=Saccharomyces cerevisiae, GI6321525, Length=510, Percent_Identity=37.4509803921569, Blast_Score=323, Evalue=5e-89, Organism=Drosophila melanogaster, GI17981717, Length=481, Percent_Identity=44.4906444906445, Blast_Score=414, Evalue=1e-116, Organism=Drosophila melanogaster, GI19920968, Length=485, Percent_Identity=40.4123711340206, Blast_Score=385, Evalue=1e-107,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002226 - InterPro: IPR020835 - InterPro: IPR010582 - InterPro: IPR018028 - InterPro: IPR011614 [H]
Pfam domain/function: PF00199 Catalase; PF06628 Catalase-rel [H]
EC number: =1.11.1.6 [H]
Molecular weight: Translated: 55941; Mature: 55941
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: PS00437 CATALASE_1 ; PS00438 CATALASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQHRQLTTNQGVPIGDNANSITAGRRGPTLLEDYQLIEKLAHFDRERVPERVVHARGAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AHGVFTVKNSMKRYTKAAFLQEEGQETPVFARFSTVIHGLGSPETLRDPRGFAVKFYTEE CCCEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHCCCCCCCEEEEEEEC GNYDFVGNNLPVFFIRDAIKFPDVIHSLKPDPQTNLQDPDRFFDFMSLTPESTNMLLHLF CCEEEECCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEE SDEGIPASYRHMRGSSVHSFKWVNEFGNTVYIKMRWVPKQGIQNLSMEEAAKIQAEDFNH CCCCCCHHHHHCCCCCCHHHHHHHHHCCEEEEEEEECCHHHHCCCCHHHHHHHHHHHCCH ATRDLFNAIENGDYPEWDLYVQILDPADMDNFDFDPLDATKDWFEDVIPYQLVGTMTLNK HHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCHHEEEEEEECC NVDNFFAETESVGFNPGVLVPGIQPSEDKMLQGRLFSYSDTQRHRIGPNYLQLPINCPFA CHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHCEEECCCCCHHHCCCCCEEEEECCCCHH QVANNQRDGAMPFKQQTSPVNYEPNRYEDAPKPNADYIETPQPITGVTGRQKIEKTNDFG HHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC QAGEVYRRYSQEEKDALIRNLVAHIKEVRHEKTVLLLICNFYRADRELGERLSNELNVDL HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHCCCCH APFLNQMSN HHHHHHHCC >Mature Secondary Structure MDQHRQLTTNQGVPIGDNANSITAGRRGPTLLEDYQLIEKLAHFDRERVPERVVHARGAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AHGVFTVKNSMKRYTKAAFLQEEGQETPVFARFSTVIHGLGSPETLRDPRGFAVKFYTEE CCCEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHCCCCCCCEEEEEEEC GNYDFVGNNLPVFFIRDAIKFPDVIHSLKPDPQTNLQDPDRFFDFMSLTPESTNMLLHLF CCEEEECCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEE SDEGIPASYRHMRGSSVHSFKWVNEFGNTVYIKMRWVPKQGIQNLSMEEAAKIQAEDFNH CCCCCCHHHHHCCCCCCHHHHHHHHHCCEEEEEEEECCHHHHCCCCHHHHHHHHHHHCCH ATRDLFNAIENGDYPEWDLYVQILDPADMDNFDFDPLDATKDWFEDVIPYQLVGTMTLNK HHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCHHEEEEEEECC NVDNFFAETESVGFNPGVLVPGIQPSEDKMLQGRLFSYSDTQRHRIGPNYLQLPINCPFA CHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHCEEECCCCCHHHCCCCCEEEEECCCCHH QVANNQRDGAMPFKQQTSPVNYEPNRYEDAPKPNADYIETPQPITGVTGRQKIEKTNDFG HHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC QAGEVYRRYSQEEKDALIRNLVAHIKEVRHEKTVLLLICNFYRADRELGERLSNELNVDL HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHCCCCH APFLNQMSN HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11679669 [H]